sample	sample_name	tag	mapping_meteor_version	mapping_tool	mapping_tool_version	mapping_date	reference_name	reference_date	database_type	trim	alignment_number	mapping_type	total_read_count	mapped_reads	overall_alignment_rate	fastq_files	mapping_file	counted_reads	identity_threshold	count_file	final_mapping_rate	profiling_meteor_version	profiling_date	profiling_reference_name	profiling_reference_date	profiling_database_type	normalization	rarefaction_level	seed	msp_core_size	msp_filter	modules_db	module_completeness	gene_count	msp_count	msp_signal	kegg_signal_by_genes	kegg_gene_count_by_genes	kegg_signal_by_msp	kegg_gene_count_by_msp	mustard_signal_by_genes	mustard_gene_count_by_genes	mustard_signal_by_msp	mustard_gene_count_by_msp	dbcan_signal_by_genes	dbcan_gene_count_by_genes	dbcan_signal_by_msp	dbcan_gene_count_by_msp	resfinder_signal_by_genes	resfinder_gene_count_by_genes	resfinder_signal_by_msp	resfinder_gene_count_by_msp	resfinderfg_signal_by_genes	resfinderfg_gene_count_by_genes	resfinderfg_signal_by_msp	resfinderfg_gene_count_by_msp
DSMC-KB-0141_cleaned	DSMC-KB-0141_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-04	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	10869488	9283772	85.41	['fastq_index_2/DSMC-KB-0141_cleaned/DSMC-KB-0141_cleaned.2.fq', 'fastq_index_2/DSMC-KB-0141_cleaned/DSMC-KB-0141_cleaned.1.fq']	DSMC-KB-0141_cleaned_raw.cram	5085338	0.95	DSMC-KB-0141_cleaned.tsv.xz	46.79	2.0.22	2026-04-07	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	520982	199	0.68	0.312879	188682	0.272667	140007	0.00208	885	0.001535	708	0.031636	18573	0.027599	13400	0.000445	55	6.2e-05	11	0.000544	131	0.000267	97
MN_123_cleaned	MN_123_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	18765262	16112166	85.86	['fastq_index/MN_123_cleaned/MN_123_cleaned.2.fq', 'fastq_index/MN_123_cleaned/MN_123_cleaned.1.fq']	MN_123_cleaned_raw.cram	8804210	0.95	MN_123_cleaned.tsv.xz	46.92	2.0.22	2026-04-07	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	792795	289	0.61	0.297819	286676	0.248835	204330	0.001586	1324	0.001177	1025	0.032317	27318	0.025857	18851	0.000339	49	1.4e-05	5	0.000541	189	0.00023	140
DSMC-KB-0036_cleaned	DSMC-KB-0036_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-22	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	7781922	4952943	63.65	['output/fastq_index/DSMC-KB-0036_cleaned/DSMC-KB-0036_cleaned.2.fq', 'output/fastq_index/DSMC-KB-0036_cleaned/DSMC-KB-0036_cleaned.1.fq']	DSMC-KB-0036_cleaned_raw.cram	2703160	0.95	DSMC-KB-0036_cleaned.tsv.xz	34.74	2.0.22	2026-04-07	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	547442	280	0.6	0.301299	203621	0.247458	158622	0.001945	937	0.001264	797	0.026475	20596	0.022627	16554	0.000656	48	5e-06	4	0.000481	116	0.000138	85
S0268_cleaned	S0268_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	35843870	30840093	86.04	['fastq_index_3/S0268_cleaned/S0268_cleaned.2.fq', 'fastq_index_3/S0268_cleaned/S0268_cleaned.1.fq']	S0268_cleaned_raw.cram	16595216	0.95	S0268_cleaned.tsv.xz	46.3	2.0.22	2026-04-07	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	797634	264	0.56	0.292003	286447	0.232041	206405	0.001443	1274	0.00101	975	0.023805	25981	0.018162	17632	0.000271	66	4e-06	9	0.00042	218	0.000206	150
BRM00082_cleaned	BRM00082_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-13	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	22160830	19918867	89.88	['fastq_index_1/BRM00082_cleaned/BRM00082_cleaned.2.fq', 'fastq_index_1/BRM00082_cleaned/BRM00082_cleaned.1.fq']	BRM00082_cleaned_raw.cram	10648536	0.95	BRM00082_cleaned.tsv.xz	48.05	2.0.22	2026-04-15	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	346773	152	0.69	0.296314	127155	0.269268	96549	0.001525	572	0.001307	464	0.036098	14046	0.032364	10020	0.000361	46	5.4e-05	8	0.00052	101	0.000324	70
R117-0_cleaned	R117-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	38820914	34770225	89.57	['fastq_index/R117-0_cleaned/R117-0_cleaned.1.fq', 'fastq_index/R117-0_cleaned/R117-0_cleaned.2.fq']	R117-0_cleaned_raw.cram	18777199	0.95	R117-0_cleaned.tsv.xz	48.37	2.0.22	2026-04-07	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	638404	252	0.68	0.357085	242744	0.29694	179421	0.001698	1089	0.00125	839	0.03883	22767	0.031049	15973	0.000395	62	2e-06	8	0.000572	172	0.000304	131
G367_cleaned	G367_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-07	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	38757306	33872445	87.4	['fastq_index_2/G367_cleaned/G367_cleaned.2.fq', 'fastq_index_2/G367_cleaned/G367_cleaned.1.fq']	G367_cleaned_raw.cram	18052662	0.95	G367_cleaned.tsv.xz	46.58	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	331934	153	0.71	0.362336	130181	0.311197	96847	0.002294	612	0.001679	469	0.028883	12647	0.024635	8894	0.000805	59	0.000151	8	0.000842	110	0.000467	75
SSV00163_cleaned	SSV00163_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	50485306	42235901	83.66	['fastq_index_3/SSV00163_cleaned/SSV00163_cleaned.2.fq', 'fastq_index_3/SSV00163_cleaned/SSV00163_cleaned.1.fq']	SSV00163_cleaned_raw.cram	16740370	0.95	SSV00163_cleaned.tsv.xz	33.16	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	808313	333	0.52	0.278557	303406	0.229829	221453	0.001535	1350	0.001272	1048	0.021503	28440	0.017133	19604	0.000116	87	5e-06	18	0.000348	205	0.00021	149
G423_cleaned	G423_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	27119880	24773804	91.35	['fastq_index/G423_cleaned/G423_cleaned.2.fq', 'fastq_index/G423_cleaned/G423_cleaned.1.fq']	G423_cleaned_raw.cram	13226011	0.95	G423_cleaned.tsv.xz	48.77	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	264369	98	0.6	0.272183	96334	0.23542	76575	0.00113	412	0.000965	338	0.04547	11548	0.036158	8791	0.000336	44	4e-06	3	0.000484	88	0.000358	66
R173-0_cleaned	R173-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	31091372	27144067	87.3	['fastq_index_4/R173-0_cleaned/R173-0_cleaned.2.fq', 'fastq_index_4/R173-0_cleaned/R173-0_cleaned.1.fq']	R173-0_cleaned_raw.cram	14606525	0.95	R173-0_cleaned.tsv.xz	46.98	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	882402	325	0.62	0.31963	312083	0.270816	225210	0.001873	1434	0.001408	1139	0.029219	28596	0.024492	20148	0.000259	48	2.1e-05	4	0.000508	190	0.000197	139
R63-0_cleaned	R63-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	33066270	27472316	83.08	['fastq_index_4/R63-0_cleaned/R63-0_cleaned.1.fq', 'fastq_index_4/R63-0_cleaned/R63-0_cleaned.2.fq']	R63-0_cleaned_raw.cram	14909586	0.95	R63-0_cleaned.tsv.xz	45.09	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	1077326	455	0.61	0.31534	391405	0.260771	288971	0.001817	2063	0.001405	1647	0.029176	33682	0.022604	24376	0.000351	82	1.4e-05	14	0.000367	206	0.000176	143
DSMC-KB-0206_cleaned	DSMC-KB-0206_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-05	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	74367144	64081126	86.17	['fastq_index_2/DSMC-KB-0206_cleaned/DSMC-KB-0206_cleaned.2.fq', 'fastq_index_2/DSMC-KB-0206_cleaned/DSMC-KB-0206_cleaned.1.fq']	DSMC-KB-0206_cleaned_raw.cram	25661422	0.95	DSMC-KB-0206_cleaned.tsv.xz	34.51	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	902080	262	0.63	0.300024	302949	0.257957	212683	0.001511	1316	0.001141	1019	0.021309	28067	0.017939	18973	0.000278	70	1e-05	11	0.000498	224	0.000325	156
DSMC-KB-0183_cleaned	DSMC-KB-0183_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-04	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	41480818	36912864	88.99	['fastq_index_2/DSMC-KB-0183_cleaned/DSMC-KB-0183_cleaned.1.fq', 'fastq_index_2/DSMC-KB-0183_cleaned/DSMC-KB-0183_cleaned.2.fq']	DSMC-KB-0183_cleaned_raw.cram	19678883	0.95	DSMC-KB-0183_cleaned.tsv.xz	47.44	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	489512	193	0.6	0.277089	181832	0.234444	129917	0.001671	792	0.001144	618	0.031733	18800	0.024433	12693	0.000619	48	0.000109	5	0.000614	138	0.000243	101
R106-0_cleaned	R106-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	20025908	17812577	88.95	['fastq_index/R106-0_cleaned/R106-0_cleaned.1.fq', 'fastq_index/R106-0_cleaned/R106-0_cleaned.2.fq']	R106-0_cleaned_raw.cram	9580484	0.95	R106-0_cleaned.tsv.xz	47.84	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	583713	200	0.59	0.274926	204485	0.228662	151262	0.001319	880	0.001067	681	0.037832	22344	0.028502	16011	0.000226	50	2.8e-05	6	0.000599	136	0.000309	103
G450_cleaned	G450_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	43369784	38587674	88.97	['fastq_index/G450_cleaned/G450_cleaned.2.fq', 'fastq_index/G450_cleaned/G450_cleaned.1.fq']	G450_cleaned_raw.cram	20574050	0.95	G450_cleaned.tsv.xz	47.44	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	671687	249	0.6	0.287884	240405	0.237325	176728	0.001246	1101	0.00093	865	0.034812	24190	0.02677	16944	0.000225	59	0.0	4	0.000661	178	0.000235	129
DSM00214_cleaned	DSM00214_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-21	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	41208292	37164553	90.19	['output/fastq_index/DSM00214_cleaned/DSM00214_cleaned.1.fq', 'output/fastq_index/DSM00214_cleaned/DSM00214_cleaned.2.fq']	DSM00214_cleaned_raw.cram	19823220	0.95	DSM00214_cleaned.tsv.xz	48.1	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	431658	157	0.63	0.300112	158602	0.259571	117815	0.001196	688	0.000958	516	0.036642	14930	0.030461	10529	0.000293	57	6e-06	6	0.000568	143	0.000337	94
SSV-KB-0102_cleaned	SSV-KB-0102_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	34420486	31121372	90.42	['fastq_index_3/SSV-KB-0102_cleaned/SSV-KB-0102_cleaned.2.fq', 'fastq_index_3/SSV-KB-0102_cleaned/SSV-KB-0102_cleaned.1.fq']	SSV-KB-0102_cleaned_raw.cram	16624926	0.95	SSV-KB-0102_cleaned.tsv.xz	48.3	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	379128	212	0.67	0.28566	144420	0.255061	111777	0.001292	660	0.001143	536	0.035457	16366	0.030684	11911	0.001423	64	2.1e-05	7	0.000512	120	0.000327	84
D73_cleaned	D73_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-20	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	20750830	18682551	90.03	['output/fastq_index/D73_cleaned/D73_cleaned.2.fq', 'output/fastq_index/D73_cleaned/D73_cleaned.1.fq']	D73_cleaned_raw.cram	10058670	0.95	D73_cleaned.tsv.xz	48.47	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	514557	181	0.64	0.312232	187101	0.268547	137239	0.001528	828	0.001173	628	0.034352	18328	0.028189	12803	0.000255	55	2e-06	4	0.000559	142	0.000299	100
R247-0_cleaned	R247-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-13	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	24140760	21191329	87.78	['fastq_index_2/R247-0_cleaned/R247-0_cleaned.2.fq', 'fastq_index_2/R247-0_cleaned/R247-0_cleaned.1.fq']	R247-0_cleaned_raw.cram	11383393	0.95	R247-0_cleaned.tsv.xz	47.15	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	515310	167	0.62	0.334777	188468	0.276697	139403	0.001372	811	0.00113	637	0.030061	17810	0.023673	12902	0.000173	57	2.8e-05	8	0.000447	148	0.000257	102
DSM00208_cleaned	DSM00208_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-21	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	29987314	27261396	90.91	['output/fastq_index/DSM00208_cleaned/DSM00208_cleaned.2.fq', 'output/fastq_index/DSM00208_cleaned/DSM00208_cleaned.1.fq']	DSM00208_cleaned_raw.cram	14572701	0.95	DSM00208_cleaned.tsv.xz	48.6	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	740019	244	0.56	0.313825	264781	0.244269	189840	0.001499	1128	0.001041	865	0.033522	26138	0.025977	17756	0.00019	49	7e-06	5	0.000468	189	0.000235	142
G417_cleaned	G417_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	12141900	9874026	81.32	['fastq_index/G417_cleaned/G417_cleaned.2.fq', 'fastq_index/G417_cleaned/G417_cleaned.1.fq']	G417_cleaned_raw.cram	5417393	0.95	G417_cleaned.tsv.xz	44.62	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	225066	70	0.63	0.374419	87034	0.320675	64284	0.001652	390	0.001244	288	0.013191	5170	0.010958	3717	0.000452	47	2.9e-05	7	0.000636	75	0.000366	44
R300-0_cleaned	R300-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	20711020	18067999	87.24	['fastq_index_2/R300-0_cleaned/R300-0_cleaned.2.fq', 'fastq_index_2/R300-0_cleaned/R300-0_cleaned.1.fq']	R300-0_cleaned_raw.cram	9722786	0.95	R300-0_cleaned.tsv.xz	46.94	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	538765	186	0.56	0.295767	188109	0.241721	131961	0.001546	789	0.001074	597	0.026876	16670	0.02123	11164	0.000355	45	0.0	2	0.000546	172	0.000328	124
R92-0_cleaned	R92-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	39224194	33526715	85.47	['fastq_index_4/R92-0_cleaned/R92-0_cleaned.1.fq', 'fastq_index_4/R92-0_cleaned/R92-0_cleaned.2.fq']	R92-0_cleaned_raw.cram	18067428	0.95	R92-0_cleaned.tsv.xz	46.06	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	762390	294	0.63	0.420701	280142	0.343004	200562	0.001981	1243	0.001748	944	0.024404	25183	0.020169	17613	0.000278	69	8.5e-05	12	0.000402	203	0.000232	136
SNUH-KB-0170_cleaned	SNUH-KB-0170_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	35357428	30653986	86.7	['fastq_index_3/SNUH-KB-0170_cleaned/SNUH-KB-0170_cleaned.2.fq', 'fastq_index_3/SNUH-KB-0170_cleaned/SNUH-KB-0170_cleaned.1.fq']	SNUH-KB-0170_cleaned_raw.cram	16531899	0.95	SNUH-KB-0170_cleaned.tsv.xz	46.76	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	525329	190	0.69	0.408193	196682	0.351983	143565	0.001589	823	0.00139	642	0.018575	17272	0.01531	12008	0.001111	53	6e-06	8	0.001155	149	0.00035	107
DSMC-KB-0072_cleaned	DSMC-KB-0072_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-23	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	41525342	36843821	88.73	['output/fastq_index/DSMC-KB-0072_cleaned/DSMC-KB-0072_cleaned.2.fq', 'output/fastq_index/DSMC-KB-0072_cleaned/DSMC-KB-0072_cleaned.1.fq']	DSMC-KB-0072_cleaned_raw.cram	19467092	0.95	DSMC-KB-0072_cleaned.tsv.xz	46.88	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	572878	217	0.6	0.271629	210198	0.22855	149685	0.001417	888	0.001167	670	0.038495	19430	0.030132	13288	0.000183	61	1e-05	7	0.00048	163	0.000282	114
S0298_cleaned	S0298_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	32869736	28445366	86.54	['fastq_index_3/S0298_cleaned/S0298_cleaned.1.fq', 'fastq_index_3/S0298_cleaned/S0298_cleaned.2.fq']	S0298_cleaned_raw.cram	15247705	0.95	S0298_cleaned.tsv.xz	46.39	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	831952	290	0.62	0.309032	295273	0.256547	213991	0.002012	1492	0.001298	1156	0.030707	27441	0.024497	19622	0.000365	56	2e-06	8	0.000441	174	0.000199	122
G405_cleaned	G405_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-23	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	27970314	23443564	83.82	['fastq_index/G405_cleaned/G405_cleaned.1.fq', 'fastq_index/G405_cleaned/G405_cleaned.2.fq']	G405_cleaned_raw.cram	12763887	0.95	G405_cleaned.tsv.xz	45.63	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	1010329	378	0.62	0.297209	350258	0.254197	260143	0.001703	1688	0.001455	1396	0.025962	32451	0.021318	23208	0.000321	48	6.2e-05	4	0.00041	193	0.000196	151
BRM00109_cleaned	BRM00109_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-17	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	35248096	31512783	89.4	['output/fastq_index/BRM00109_cleaned/BRM00109_cleaned.1.fq', 'output/fastq_index/BRM00109_cleaned/BRM00109_cleaned.2.fq']	BRM00109_cleaned_raw.cram	16825470	0.95	BRM00109_cleaned.tsv.xz	47.73	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	442530	152	0.63	0.276978	161304	0.236705	117137	0.001238	715	0.000938	555	0.039631	15276	0.032532	10432	0.000341	54	1.3e-05	7	0.000486	122	0.000282	85
R4-0_cleaned	R4-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	30181858	26843715	88.94	['fastq_index_4/R4-0_cleaned/R4-0_cleaned.1.fq', 'fastq_index_4/R4-0_cleaned/R4-0_cleaned.2.fq']	R4-0_cleaned_raw.cram	14477682	0.95	R4-0_cleaned.tsv.xz	47.97	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	575767	203	0.56	0.278064	203253	0.222727	150871	0.001352	869	0.00096	674	0.034132	20096	0.025743	14484	0.000352	51	2.7e-05	14	0.000558	134	0.000253	98
SSV00170_cleaned	SSV00170_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	43605198	37383936	85.73	['fastq_index_3/SSV00170_cleaned/SSV00170_cleaned.2.fq', 'fastq_index_3/SSV00170_cleaned/SSV00170_cleaned.1.fq']	SSV00170_cleaned_raw.cram	20112185	0.95	SSV00170_cleaned.tsv.xz	46.12	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	531083	209	0.62	0.30756	192168	0.258443	136511	0.00148	835	0.001256	631	0.03083	19204	0.024468	12847	0.000176	61	9e-06	9	0.000432	134	0.000186	87
SSV-KV-0108_cleaned	SSV-KV-0108_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	41041964	34630130	84.38	['fastq_index_3/SSV-KV-0108_cleaned/SSV-KV-0108_cleaned.1.fq', 'fastq_index_3/SSV-KV-0108_cleaned/SSV-KV-0108_cleaned.2.fq']	SSV-KV-0108_cleaned_raw.cram	18621326	0.95	SSV-KV-0108_cleaned.tsv.xz	45.37	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	1089281	388	0.6	0.306371	391455	0.252841	279412	0.001522	1816	0.001121	1406	0.027765	36065	0.02219	24699	0.000246	59	6e-06	11	0.000376	224	0.000133	162
R37-0_cleaned	R37-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	56800600	48825596	85.96	['fastq_index_4/R37-0_cleaned/R37-0_cleaned.2.fq', 'fastq_index_4/R37-0_cleaned/R37-0_cleaned.1.fq']	R37-0_cleaned_raw.cram	26482034	0.95	R37-0_cleaned.tsv.xz	46.62	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	1107239	360	0.58	0.309171	392503	0.252377	278294	0.001823	1753	0.001451	1363	0.024918	35875	0.019856	24331	0.000386	85	3.4e-05	21	0.000407	241	0.000171	167
G476_cleaned	G476_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	27908986	24462165	87.65	['fastq_index/G476_cleaned/G476_cleaned.1.fq', 'fastq_index/G476_cleaned/G476_cleaned.2.fq']	G476_cleaned_raw.cram	13146687	0.95	G476_cleaned.tsv.xz	47.11	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	669097	234	0.63	0.2999	254732	0.254862	184815	0.001444	1129	0.001098	898	0.034279	24491	0.027761	17338	0.000358	59	2.7e-05	10	0.000455	175	0.00023	125
DSMC-KB-0169_cleaned	DSMC-KB-0169_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-04	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	48719882	42247442	86.71	['fastq_index_2/DSMC-KB-0169_cleaned/DSMC-KB-0169_cleaned.2.fq', 'fastq_index_2/DSMC-KB-0169_cleaned/DSMC-KB-0169_cleaned.1.fq']	DSMC-KB-0169_cleaned_raw.cram	22617482	0.95	DSMC-KB-0169_cleaned.tsv.xz	46.42	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	1053259	360	0.61	0.318227	361371	0.262438	260937	0.002131	1706	0.001551	1350	0.022942	32366	0.017884	22932	0.000315	66	8e-06	10	0.000423	216	0.000168	144
DSM00229_cleaned	DSM00229_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-21	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	16055786	13960856	86.95	['output/fastq_index/DSM00229_cleaned/DSM00229_cleaned.1.fq', 'output/fastq_index/DSM00229_cleaned/DSM00229_cleaned.2.fq']	DSM00229_cleaned_raw.cram	7438148	0.95	DSM00229_cleaned.tsv.xz	46.33	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	709724	293	0.61	0.290586	258151	0.251336	192120	0.001454	1190	0.001229	943	0.027164	26576	0.022555	18730	0.000204	59	2.6e-05	6	0.000437	168	0.000239	122
MN_165_cleaned	MN_165_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-16	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	29849130	25832618	86.54	['output/fastq_index/MN_165_cleaned/MN_165_cleaned.1.fq', 'output/fastq_index/MN_165_cleaned/MN_165_cleaned.2.fq']	MN_165_cleaned_raw.cram	14109626	0.95	MN_165_cleaned.tsv.xz	47.27	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	778559	319	0.6	0.278682	282195	0.234352	206222	0.001561	1358	0.001257	1088	0.029396	27167	0.022474	19552	0.000547	62	6.5e-05	14	0.000596	178	0.000189	125
control_D33_cleaned	control_D33_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-18	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	14302928	12759167	89.21	['output/fastq_index/control_D33_cleaned/control_D33_cleaned.1.fq', 'output/fastq_index/control_D33_cleaned/control_D33_cleaned.2.fq']	control_D33_cleaned_raw.cram	6936675	0.95	control_D33_cleaned.tsv.xz	48.5	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	432019	138	0.61	0.288104	153849	0.243855	114899	0.001434	675	0.000984	527	0.036216	16069	0.031347	11842	0.000376	47	3e-06	5	0.000485	107	0.000248	84
R210-0_cleaned	R210-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	31377414	27776812	88.52	['fastq_index_4/R210-0_cleaned/R210-0_cleaned.2.fq', 'fastq_index_4/R210-0_cleaned/R210-0_cleaned.1.fq']	R210-0_cleaned_raw.cram	14935033	0.95	R210-0_cleaned.tsv.xz	47.6	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	670629	223	0.6	0.311438	234076	0.261181	162587	0.001948	1063	0.001529	794	0.029078	20420	0.023698	13853	0.000328	57	1e-05	9	0.000533	182	0.000265	115
SNUH-KB-0015_cleaned	SNUH-KB-0015_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	12417496	10446887	84.13	['fastq_index_3/SNUH-KB-0015_cleaned/SNUH-KB-0015_cleaned.2.fq', 'fastq_index_3/SNUH-KB-0015_cleaned/SNUH-KB-0015_cleaned.1.fq']	SNUH-KB-0015_cleaned_raw.cram	5796649	0.95	SNUH-KB-0015_cleaned.tsv.xz	46.68	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	474356	158	0.58	0.280217	177112	0.229322	125353	0.001214	766	0.000979	556	0.029863	16844	0.022217	11262	0.000387	57	9.3e-05	9	0.000513	143	0.000328	98
R82-0_cleaned	R82-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	38435026	33436582	87.0	['fastq_index_4/R82-0_cleaned/R82-0_cleaned.1.fq', 'fastq_index_4/R82-0_cleaned/R82-0_cleaned.2.fq']	R82-0_cleaned_raw.cram	18147633	0.95	R82-0_cleaned.tsv.xz	47.22	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	615480	223	0.59	0.315129	244494	0.254144	172969	0.002233	1162	0.001571	876	0.03421	22753	0.02555	15053	0.000957	78	0.000172	18	0.000554	159	0.000288	121
G210_cleaned	G210_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-05	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	38887112	34646390	89.09	['fastq_index_2/G210_cleaned/G210_cleaned.1.fq', 'fastq_index_2/G210_cleaned/G210_cleaned.2.fq']	G210_cleaned_raw.cram	18582890	0.95	G210_cleaned.tsv.xz	47.79	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	806493	274	0.61	0.302139	285129	0.252773	208225	0.001553	1277	0.001197	990	0.026619	23462	0.022151	16739	0.000225	58	5e-06	7	0.000484	188	0.000262	133
BRM00106_cleaned	BRM00106_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-13	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	16055130	13841434	86.21	['fastq_index_1/BRM00106_cleaned/BRM00106_cleaned.1.fq', 'fastq_index_1/BRM00106_cleaned/BRM00106_cleaned.2.fq']	BRM00106_cleaned_raw.cram	7508154	0.95	BRM00106_cleaned.tsv.xz	46.76	2.0.22	2026-04-15	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	331845	178	0.33	0.172532	125934	0.134869	98982	0.00077	556	0.000473	453	0.018236	14087	0.013601	10416	0.00028	53	0.0	3	0.00033	118	0.000181	79
KNUH-KB-0010_cleaned	KNUH-KB-0010_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	8323210	6867759	82.51	['fastq_index/KNUH-KB-0010_cleaned/KNUH-KB-0010_cleaned.1.fq', 'fastq_index/KNUH-KB-0010_cleaned/KNUH-KB-0010_cleaned.2.fq']	KNUH-KB-0010_cleaned_raw.cram	3893306	0.95	KNUH-KB-0010_cleaned.tsv.xz	46.78	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	447455	168	0.64	0.329114	171100	0.272578	122206	0.0013	761	0.000956	574	0.035707	16681	0.029232	12093	0.000271	52	2e-06	4	0.000527	140	0.000291	99
S0075_cleaned	S0075_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	50720262	45965882	90.63	['fastq_index_4/S0075_cleaned/S0075_cleaned.1.fq', 'fastq_index_4/S0075_cleaned/S0075_cleaned.2.fq']	S0075_cleaned_raw.cram	24551991	0.95	S0075_cleaned.tsv.xz	48.41	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	567845	213	0.54	0.239987	197006	0.209053	144680	0.001125	886	0.000858	673	0.033081	21249	0.027664	15205	0.00029	47	1.4e-05	4	0.000425	139	0.000255	104
control_D42_cleaned	control_D42_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-18	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	15954564	14051517	88.07	['output/fastq_index/control_D42_cleaned/control_D42_cleaned.2.fq', 'output/fastq_index/control_D42_cleaned/control_D42_cleaned.1.fq']	control_D42_cleaned_raw.cram	7650359	0.95	control_D42_cleaned.tsv.xz	47.95	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	311073	116	0.65	0.325502	130566	0.27984	102669	0.001455	614	0.001214	498	0.038286	10824	0.032096	7993	0.000312	70	3.4e-05	15	0.000634	104	0.000398	75
DSM00259_cleaned	DSM00259_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-21	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	44836968	40299987	89.88	['output/fastq_index/DSM00259_cleaned/DSM00259_cleaned.2.fq', 'output/fastq_index/DSM00259_cleaned/DSM00259_cleaned.1.fq']	DSM00259_cleaned_raw.cram	21408240	0.95	DSM00259_cleaned.tsv.xz	47.75	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	742771	239	0.62	0.278097	254254	0.236012	181631	0.001328	1145	0.000947	881	0.032226	24178	0.026119	16780	0.000325	59	2e-06	11	0.00052	181	0.000231	126
G345_cleaned	G345_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	34677846	30183058	87.04	['fastq_index_4/G345_cleaned/G345_cleaned.2.fq', 'fastq_index_4/G345_cleaned/G345_cleaned.1.fq']	G345_cleaned_raw.cram	16183600	0.95	G345_cleaned.tsv.xz	46.67	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	860844	337	0.56	0.290548	300305	0.237432	217130	0.001713	1424	0.001187	1138	0.02359	26067	0.019635	18458	0.000414	57	6e-06	3	0.000533	199	0.000235	145
DSMC-KB-0128_cleaned	DSMC-KB-0128_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	76594988	67544401	88.18	['fastq_index_2/DSMC-KB-0128_cleaned/DSMC-KB-0128_cleaned.1.fq', 'fastq_index_2/DSMC-KB-0128_cleaned/DSMC-KB-0128_cleaned.2.fq']	DSMC-KB-0128_cleaned_raw.cram	36061857	0.95	DSMC-KB-0128_cleaned.tsv.xz	47.08	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	904280	305	0.6	0.286473	325880	0.236033	232386	0.001381	1480	0.001067	1135	0.029603	30024	0.022424	20441	0.000239	80	3.9e-05	13	0.000434	207	0.000229	150
SNUH-KB-0060_cleaned	SNUH-KB-0060_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	12544266	10754459	85.73	['fastq_index_3/SNUH-KB-0060_cleaned/SNUH-KB-0060_cleaned.2.fq', 'fastq_index_3/SNUH-KB-0060_cleaned/SNUH-KB-0060_cleaned.1.fq']	SNUH-KB-0060_cleaned_raw.cram	5887999	0.95	SNUH-KB-0060_cleaned.tsv.xz	46.94	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	587208	235	0.59	0.285471	213189	0.238651	159478	0.001518	968	0.001183	792	0.032244	21860	0.024736	15700	0.000317	44	2.9e-05	8	0.000503	133	0.000223	90
R114-0_cleaned	R114-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	32116028	28881223	89.93	['fastq_index_4/R114-0_cleaned/R114-0_cleaned.2.fq', 'fastq_index_4/R114-0_cleaned/R114-0_cleaned.1.fq']	R114-0_cleaned_raw.cram	15403888	0.95	R114-0_cleaned.tsv.xz	47.96	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	422284	145	0.62	0.287905	155972	0.239753	119917	0.001405	685	0.001041	544	0.037593	17428	0.027353	12832	0.000461	54	0.000102	6	0.000687	121	0.000314	81
SSV-KB-0104_cleaned	SSV-KB-0104_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	29624526	26588171	89.75	['fastq_index_3/SSV-KB-0104_cleaned/SSV-KB-0104_cleaned.2.fq', 'fastq_index_3/SSV-KB-0104_cleaned/SSV-KB-0104_cleaned.1.fq']	SSV-KB-0104_cleaned_raw.cram	14258470	0.95	SSV-KB-0104_cleaned.tsv.xz	48.13	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	656610	271	0.63	0.323512	242867	0.282429	174007	0.001766	1078	0.001519	816	0.03357	23473	0.028433	16231	0.000318	65	3e-06	13	0.000402	189	0.000191	127
DSMC-KB-0130_cleaned	DSMC-KB-0130_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	39669866	34614216	87.26	['fastq_index_2/DSMC-KB-0130_cleaned/DSMC-KB-0130_cleaned.2.fq', 'fastq_index_2/DSMC-KB-0130_cleaned/DSMC-KB-0130_cleaned.1.fq']	DSMC-KB-0130_cleaned_raw.cram	18476090	0.95	DSMC-KB-0130_cleaned.tsv.xz	46.57	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	642611	249	0.59	0.273787	234949	0.236779	172854	0.001267	1006	0.001067	773	0.031766	22612	0.025836	15384	0.000193	72	1e-06	7	0.000456	174	0.000283	111
DSM00293_cleaned	DSM00293_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-22	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	23817772	21266482	89.29	['output/fastq_index/DSM00293_cleaned/DSM00293_cleaned.1.fq', 'output/fastq_index/DSM00293_cleaned/DSM00293_cleaned.2.fq']	DSM00293_cleaned_raw.cram	11371658	0.95	DSM00293_cleaned.tsv.xz	47.74	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	443245	156	0.6	0.273336	154827	0.220893	107962	0.001318	668	0.001048	492	0.036199	13332	0.02902	9045	0.000342	37	3.4e-05	3	0.000337	111	0.000217	73
R308-0_cleaned	R308-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	25572422	22322834	87.29	['fastq_index_3/R308-0_cleaned/R308-0_cleaned.2.fq', 'fastq_index_3/R308-0_cleaned/R308-0_cleaned.1.fq']	R308-0_cleaned_raw.cram	11976421	0.95	R308-0_cleaned.tsv.xz	46.83	2.0.22	2026-04-15	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	759328	290	0.65	0.319334	264228	0.275181	192636	0.001801	1225	0.001375	990	0.030581	24151	0.026864	17307	0.000285	47	1e-06	4	0.00044	180	0.000232	129
SSV00165_cleaned	SSV00165_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	76224232	66391612	87.1	['fastq_index_3/SSV00165_cleaned/SSV00165_cleaned.1.fq', 'fastq_index_3/SSV00165_cleaned/SSV00165_cleaned.2.fq']	SSV00165_cleaned_raw.cram	26281181	0.95	SSV00165_cleaned.tsv.xz	34.48	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	616705	266	0.5	0.274121	227463	0.227531	169063	0.001099	1077	0.000868	848	0.018643	22957	0.015045	16077	0.000276	71	5.2e-05	10	0.00054	185	0.000374	125
DMN_22_cleaned	DMN_22_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	16356410	14484425	88.56	['fastq_index_1/DMN_22_cleaned/DMN_22_cleaned.1.fq', 'fastq_index_1/DMN_22_cleaned/DMN_22_cleaned.2.fq']	DMN_22_cleaned_raw.cram	7875452	0.95	DMN_22_cleaned.tsv.xz	48.15	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	559047	178	0.6	0.286687	201270	0.244798	148114	0.001363	916	0.001018	719	0.032712	18613	0.027659	13489	0.000491	56	1.2e-05	8	0.00066	153	0.000285	113
R142-0_cleaned	R142-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	31871314	27794885	87.21	['fastq_index_4/R142-0_cleaned/R142-0_cleaned.1.fq', 'fastq_index_4/R142-0_cleaned/R142-0_cleaned.2.fq']	R142-0_cleaned_raw.cram	14960240	0.95	R142-0_cleaned.tsv.xz	46.94	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	573986	197	0.71	0.297994	203111	0.262917	158503	0.001694	958	0.001322	780	0.033329	19019	0.028805	14345	0.00035	53	7e-06	7	0.000439	145	0.00022	102
SSV-KB-0030_cleaned	SSV-KB-0030_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	22823758	18927707	82.93	['fastq_index_3/SSV-KB-0030_cleaned/SSV-KB-0030_cleaned.2.fq', 'fastq_index_3/SSV-KB-0030_cleaned/SSV-KB-0030_cleaned.1.fq']	SSV-KB-0030_cleaned_raw.cram	10252973	0.95	SSV-KB-0030_cleaned.tsv.xz	44.92	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	646306	218	0.62	0.306364	235842	0.257547	164082	0.001348	1005	0.001127	776	0.033765	20814	0.027075	14019	0.000253	44	2e-06	4	0.000378	145	0.000174	103
DSMC-KB-0098_cleaned	DSMC-KB-0098_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	1469522	1306528	88.91	['fastq_index_2/DSMC-KB-0098_cleaned/DSMC-KB-0098_cleaned.2.fq', 'fastq_index_2/DSMC-KB-0098_cleaned/DSMC-KB-0098_cleaned.1.fq']	DSMC-KB-0098_cleaned_raw.cram	709503	0.95	DSMC-KB-0098_cleaned.tsv.xz	48.28	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	251044	120	0.61	0.304024	97188	0.256399	75044	0.001442	451	0.001112	366	0.033471	11945	0.026819	8942	0.000164	25	1.8e-05	3	0.000382	64	0.000258	51
SNUH-KB-0210_cleaned	SNUH-KB-0210_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	28290350	25049665	88.54	['fastq_index_3/SNUH-KB-0210_cleaned/SNUH-KB-0210_cleaned.2.fq', 'fastq_index_3/SNUH-KB-0210_cleaned/SNUH-KB-0210_cleaned.1.fq']	SNUH-KB-0210_cleaned_raw.cram	13458867	0.95	SNUH-KB-0210_cleaned.tsv.xz	47.57	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	379553	123	0.65	0.306682	136713	0.264732	102559	0.001341	575	0.001077	442	0.037977	15226	0.032057	10564	0.000223	44	0.0	3	0.00048	115	0.000288	78
G415_cleaned	G415_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	29191514	26539383	90.91	['fastq_index/G415_cleaned/G415_cleaned.2.fq', 'fastq_index/G415_cleaned/G415_cleaned.1.fq']	G415_cleaned_raw.cram	14109607	0.95	G415_cleaned.tsv.xz	48.33	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	320658	129	0.64	0.331672	125513	0.282624	92516	0.001472	568	0.001226	432	0.04723	11898	0.036247	8324	0.000206	37	0.0	3	0.000507	124	0.000428	86
G397_cleaned	G397_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	11200480	9772446	87.25	['fastq_index_4/G397_cleaned/G397_cleaned.1.fq', 'fastq_index_4/G397_cleaned/G397_cleaned.2.fq']	G397_cleaned_raw.cram	5198116	0.95	G397_cleaned.tsv.xz	46.41	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	614214	262	0.58	0.283751	220241	0.238621	165650	0.001622	1024	0.001176	821	0.022158	21950	0.01838	16004	0.000304	50	4e-06	5	0.000464	163	0.000225	110
SSV-KB-0112_cleaned	SSV-KB-0112_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	39882094	35197944	88.26	['fastq_index_3/SSV-KB-0112_cleaned/SSV-KB-0112_cleaned.1.fq', 'fastq_index_3/SSV-KB-0112_cleaned/SSV-KB-0112_cleaned.2.fq']	SSV-KB-0112_cleaned_raw.cram	18867854	0.95	SSV-KB-0112_cleaned.tsv.xz	47.31	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	848169	332	0.55	0.25983	287792	0.21581	208679	0.001495	1236	0.001121	985	0.027859	28800	0.022417	20266	0.000313	67	2.2e-05	8	0.000453	185	0.000193	135
igAN_173_cleaned	igAN_173_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	17741260	15655769	88.24	['fastq_index/igAN_173_cleaned/igAN_173_cleaned.1.fq', 'fastq_index/igAN_173_cleaned/igAN_173_cleaned.2.fq']	igAN_173_cleaned_raw.cram	8395039	0.95	igAN_173_cleaned.tsv.xz	47.32	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	424802	130	0.63	0.305556	151032	0.25557	111878	0.001462	663	0.001074	521	0.037208	16225	0.030743	11634	0.000388	40	2e-06	4	0.00053	111	0.000279	85
SSV-KB-0039_cleaned	SSV-KB-0039_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	50993430	45585562	89.39	['fastq_index_3/SSV-KB-0039_cleaned/SSV-KB-0039_cleaned.2.fq', 'fastq_index_3/SSV-KB-0039_cleaned/SSV-KB-0039_cleaned.1.fq']	SSV-KB-0039_cleaned_raw.cram	24396712	0.95	SSV-KB-0039_cleaned.tsv.xz	47.84	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	781207	269	0.58	0.253077	270481	0.215021	192756	0.001286	1208	0.000981	929	0.029394	28424	0.023438	19788	0.000246	64	4.4e-05	9	0.000467	191	0.000227	141
DSMC-KB-0153_cleaned	DSMC-KB-0153_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-04	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	27811418	24087475	86.61	['fastq_index_2/DSMC-KB-0153_cleaned/DSMC-KB-0153_cleaned.1.fq', 'fastq_index_2/DSMC-KB-0153_cleaned/DSMC-KB-0153_cleaned.2.fq']	DSMC-KB-0153_cleaned_raw.cram	12813032	0.95	DSMC-KB-0153_cleaned.tsv.xz	46.07	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	272452	127	0.62	0.327894	106701	0.256872	80531	0.001297	470	0.001043	373	0.057168	9532	0.04174	6978	9.8e-05	57	1e-06	7	0.000543	90	0.00035	57
G409_cleaned	G409_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-23	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	24660896	21534296	87.32	['fastq_index/G409_cleaned/G409_cleaned.2.fq', 'fastq_index/G409_cleaned/G409_cleaned.1.fq']	G409_cleaned_raw.cram	11641672	0.95	G409_cleaned.tsv.xz	47.21	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	765431	289	0.64	0.321685	275233	0.277334	205166	0.001859	1256	0.001425	1009	0.031967	26188	0.026475	19118	0.000427	46	1e-06	6	0.000435	165	0.000164	129
control_D23_cleaned	control_D23_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-18	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	10007488	8670364	86.64	['output/fastq_index/control_D23_cleaned/control_D23_cleaned.1.fq', 'output/fastq_index/control_D23_cleaned/control_D23_cleaned.2.fq']	control_D23_cleaned_raw.cram	4737164	0.95	control_D23_cleaned.tsv.xz	47.34	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	249756	111	0.65	0.312207	106770	0.269446	81545	0.00187	492	0.001499	405	0.033888	9410	0.026331	6603	0.000491	54	7.2e-05	12	0.000416	74	0.000208	50
MN_204_cleaned	MN_204_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	19783508	17702683	89.48	['fastq_index/MN_204_cleaned/MN_204_cleaned.1.fq', 'fastq_index/MN_204_cleaned/MN_204_cleaned.2.fq']	MN_204_cleaned_raw.cram	9594951	0.95	MN_204_cleaned.tsv.xz	48.5	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	368508	120	0.6	0.311811	136685	0.252553	101278	0.001393	581	0.001086	458	0.035393	13816	0.026119	9498	0.00034	43	2e-06	7	0.00049	113	0.000289	90
SNUH-KB-0043_cleaned	SNUH-KB-0043_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	27033606	23515601	86.99	['fastq_index_3/SNUH-KB-0043_cleaned/SNUH-KB-0043_cleaned.2.fq', 'fastq_index_3/SNUH-KB-0043_cleaned/SNUH-KB-0043_cleaned.1.fq']	SNUH-KB-0043_cleaned_raw.cram	12838334	0.95	SNUH-KB-0043_cleaned.tsv.xz	47.49	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	373243	165	0.7	0.281369	132927	0.252349	103371	0.001467	626	0.001214	502	0.050346	14659	0.045312	10925	0.001045	65	2.3e-05	11	0.000447	118	0.000278	81
R99-0_cleaned	R99-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	31959930	28328864	88.64	['fastq_index_4/R99-0_cleaned/R99-0_cleaned.1.fq', 'fastq_index_4/R99-0_cleaned/R99-0_cleaned.2.fq']	R99-0_cleaned_raw.cram	15293314	0.95	R99-0_cleaned.tsv.xz	47.85	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	868381	332	0.58	0.28968	306623	0.234982	221020	0.00168	1443	0.001265	1160	0.028095	28544	0.021545	20269	0.000271	46	3.2e-05	6	0.000427	177	0.000176	129
SNUH-KB-0171_cleaned	SNUH-KB-0171_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	32927542	29474079	89.51	['fastq_index_3/SNUH-KB-0171_cleaned/SNUH-KB-0171_cleaned.2.fq', 'fastq_index_3/SNUH-KB-0171_cleaned/SNUH-KB-0171_cleaned.1.fq']	SNUH-KB-0171_cleaned_raw.cram	15751185	0.95	SNUH-KB-0171_cleaned.tsv.xz	47.84	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	457206	146	0.64	0.29844	164395	0.259621	117580	0.001206	684	0.000997	527	0.034804	14323	0.028124	9790	0.000191	52	4e-06	6	0.000577	135	0.000323	97
control_1018_cleaned	control_1018_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-17	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	10261810	9003551	87.74	['output/fastq_index/control_1018_cleaned/control_1018_cleaned.2.fq', 'output/fastq_index/control_1018_cleaned/control_1018_cleaned.1.fq']	control_1018_cleaned_raw.cram	4942722	0.95	control_1018_cleaned.tsv.xz	48.17	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	319115	109	0.62	0.319974	116392	0.267812	88823	0.001338	459	0.000828	384	0.036987	12704	0.028498	9236	0.000422	31	0.0	0	0.000678	100	0.000178	69
DSMC-KB-0062_cleaned	DSMC-KB-0062_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-23	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	38193696	31780879	83.21	['output/fastq_index/DSMC-KB-0062_cleaned/DSMC-KB-0062_cleaned.2.fq', 'output/fastq_index/DSMC-KB-0062_cleaned/DSMC-KB-0062_cleaned.1.fq']	DSMC-KB-0062_cleaned_raw.cram	17320622	0.95	DSMC-KB-0062_cleaned.tsv.xz	45.35	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	804834	258	0.65	0.354229	277091	0.307817	201255	0.002192	1264	0.001723	1000	0.027418	27937	0.022781	19219	0.000379	49	2.7e-05	6	0.000447	195	0.000229	140
G411_cleaned	G411_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	24661762	22282469	90.35	['fastq_index/G411_cleaned/G411_cleaned.2.fq', 'fastq_index/G411_cleaned/G411_cleaned.1.fq']	G411_cleaned_raw.cram	11958876	0.95	G411_cleaned.tsv.xz	48.49	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	569810	191	0.62	0.300899	204082	0.255825	150902	0.001744	928	0.001141	725	0.031629	19162	0.026053	13951	0.000749	62	2.6e-05	10	0.000657	151	0.000318	111
R29-0_cleaned	R29-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	33249582	13349924	40.15	['fastq_index_4/R29-0_cleaned/R29-0_cleaned.2.fq', 'fastq_index_4/R29-0_cleaned/R29-0_cleaned.1.fq']	R29-0_cleaned_raw.cram	7223427	0.95	R29-0_cleaned.tsv.xz	21.72	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	238376	108	0.53	0.332915	98825	0.269392	77222	0.001741	472	0.001278	375	0.012961	7369	0.010484	5569	0.000336	70	4e-06	13	0.000404	82	0.000315	52
SSV-KB-0100_cleaned	SSV-KB-0100_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	38502158	34050851	88.44	['fastq_index_3/SSV-KB-0100_cleaned/SSV-KB-0100_cleaned.1.fq', 'fastq_index_3/SSV-KB-0100_cleaned/SSV-KB-0100_cleaned.2.fq']	SSV-KB-0100_cleaned_raw.cram	18394192	0.95	SSV-KB-0100_cleaned.tsv.xz	47.77	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	622567	253	0.44	0.208372	225098	0.172844	166548	0.000863	998	0.000584	767	0.025516	22095	0.02173	15465	0.000207	68	2e-06	12	0.000338	185	0.000175	140
DSMC-KB-0189_cleaned	DSMC-KB-0189_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-04	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	321084	275812	85.9	['fastq_index_2/DSMC-KB-0189_cleaned/DSMC-KB-0189_cleaned.2.fq', 'fastq_index_2/DSMC-KB-0189_cleaned/DSMC-KB-0189_cleaned.1.fq']	DSMC-KB-0189_cleaned_raw.cram	128141	0.95	DSMC-KB-0189_cleaned.tsv.xz	39.91	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	120389	103	0.55	0.263183	47498	0.212839	36053	0.0013	234	0.000956	181	0.027325	6885	0.021491	4963	0.00029	34	1.9e-05	2	0.000318	37	0.000166	22
R102-0_cleaned	R102-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	17919416	14983432	83.62	['fastq_index_4/R102-0_cleaned/R102-0_cleaned.1.fq', 'fastq_index_4/R102-0_cleaned/R102-0_cleaned.2.fq']	R102-0_cleaned_raw.cram	8122142	0.95	R102-0_cleaned.tsv.xz	45.33	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	680897	232	0.6	0.301127	236275	0.250241	179320	0.001813	1110	0.001341	887	0.021387	20137	0.01781	15106	0.00037	57	1e-05	5	0.000476	165	0.000246	123
DSMC-KB-0077_cleaned	DSMC-KB-0077_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-23	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	38678880	33834577	87.48	['fastq_index_2/DSMC-KB-0077_cleaned/DSMC-KB-0077_cleaned.1.fq', 'fastq_index_2/DSMC-KB-0077_cleaned/DSMC-KB-0077_cleaned.2.fq']	DSMC-KB-0077_cleaned_raw.cram	17822635	0.95	DSMC-KB-0077_cleaned.tsv.xz	46.08	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	290819	150	0.56	0.265202	118971	0.224272	93060	0.001435	520	0.000908	407	0.034883	11185	0.028292	8252	0.000834	61	8e-06	12	0.000731	91	0.000399	62
D61_cleaned	D61_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-20	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	29111966	26022924	89.39	['output/fastq_index/D61_cleaned/D61_cleaned.1.fq', 'output/fastq_index/D61_cleaned/D61_cleaned.2.fq']	D61_cleaned_raw.cram	14021493	0.95	D61_cleaned.tsv.xz	48.16	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	485661	151	0.66	0.324753	183590	0.27803	130405	0.001728	829	0.00139	608	0.034424	14269	0.028452	9434	0.000387	54	3.1e-05	7	0.000588	154	0.000296	109
DSMC-KB-0073_cleaned	DSMC-KB-0073_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-23	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	16238826	14526069	89.45	['fastq_index_2/DSMC-KB-0073_cleaned/DSMC-KB-0073_cleaned.2.fq', 'fastq_index_2/DSMC-KB-0073_cleaned/DSMC-KB-0073_cleaned.1.fq']	DSMC-KB-0073_cleaned_raw.cram	7850849	0.95	DSMC-KB-0073_cleaned.tsv.xz	48.35	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	472732	150	0.64	0.315229	172796	0.267008	123845	0.001218	762	0.001008	575	0.03572	15209	0.030151	10509	0.000191	53	2e-06	9	0.00055	130	0.000334	87
G225_cleaned	G225_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	35960416	31729310	88.23	['fastq_index_1/G225_cleaned/G225_cleaned.2.fq', 'fastq_index_1/G225_cleaned/G225_cleaned.1.fq']	G225_cleaned_raw.cram	16903763	0.95	G225_cleaned.tsv.xz	47.01	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	583112	228	0.59	0.293918	221743	0.243825	161200	0.001417	1025	0.001067	780	0.029711	19786	0.02295	13653	0.000267	77	2.6e-05	15	0.000454	153	0.000257	105
G392_cleaned	G392_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-07	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	27406652	24975178	91.13	['fastq_index_2/G392_cleaned/G392_cleaned.2.fq', 'fastq_index_2/G392_cleaned/G392_cleaned.1.fq']	G392_cleaned_raw.cram	13338379	0.95	G392_cleaned.tsv.xz	48.67	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	243393	76	0.68	0.314526	88761	0.280057	71106	0.001439	407	0.001218	335	0.039879	8964	0.034301	6889	0.000143	35	1.2e-05	5	0.000547	76	0.000372	58
R11-0_cleaned	R11-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	36412218	33198361	91.17	['fastq_index/R11-0_cleaned/R11-0_cleaned.2.fq', 'fastq_index/R11-0_cleaned/R11-0_cleaned.1.fq']	R11-0_cleaned_raw.cram	17769016	0.95	R11-0_cleaned.tsv.xz	48.8	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	311045	111	0.57	0.265597	106155	0.222787	81615	0.00135	442	0.000944	345	0.036989	11477	0.028709	8531	0.000542	40	5e-06	3	0.000516	92	0.000307	63
DMN_BRMKID774_cleaned	DMN_BRMKID774_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	13883688	12343150	88.9	['fastq_index_1/DMN_BRMKID774_cleaned/DMN_BRMKID774_cleaned.1.fq', 'fastq_index_1/DMN_BRMKID774_cleaned/DMN_BRMKID774_cleaned.2.fq']	DMN_BRMKID774_cleaned_raw.cram	6653504	0.95	DMN_BRMKID774_cleaned.tsv.xz	47.92	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	334110	99	0.65	0.305558	123124	0.261468	93054	0.001375	578	0.001076	446	0.040796	12445	0.033257	9498	0.000199	37	5e-06	3	0.000547	104	0.000305	77
DSM00219_cleaned	DSM00219_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-21	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	47975972	42830038	89.27	['output/fastq_index/DSM00219_cleaned/DSM00219_cleaned.1.fq', 'output/fastq_index/DSM00219_cleaned/DSM00219_cleaned.2.fq']	DSM00219_cleaned_raw.cram	22776652	0.95	DSM00219_cleaned.tsv.xz	47.48	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	342561	158	0.82	0.325092	137326	0.307167	107341	0.001927	611	0.001746	497	0.031103	11522	0.030477	8615	0.00035	72	0.000148	20	0.000635	111	0.000394	70
KNUH-KB-0013_cleaned	KNUH-KB-0013_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	67626702	59486126	87.96	['fastq_index_4/KNUH-KB-0013_cleaned/KNUH-KB-0013_cleaned.1.fq', 'fastq_index_4/KNUH-KB-0013_cleaned/KNUH-KB-0013_cleaned.2.fq']	KNUH-KB-0013_cleaned_raw.cram	31873685	0.95	KNUH-KB-0013_cleaned.tsv.xz	47.13	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	924403	343	0.6	0.28636	324285	0.241336	237332	0.00149	1418	0.001148	1130	0.027032	31016	0.021839	21875	0.000312	73	3e-06	12	0.000446	242	0.00021	181
MN_201_cleaned	MN_201_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	23932518	20937096	87.48	['fastq_index/MN_201_cleaned/MN_201_cleaned.1.fq', 'fastq_index/MN_201_cleaned/MN_201_cleaned.2.fq']	MN_201_cleaned_raw.cram	11386823	0.95	MN_201_cleaned.tsv.xz	47.58	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	769734	250	0.6	0.281796	264097	0.235403	191332	0.001362	1220	0.001069	985	0.029702	25155	0.023842	17909	0.000301	40	1.6e-05	2	0.000494	175	0.000252	131
SSV00169_cleaned	SSV00169_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	32704308	28363685	86.73	['fastq_index_3/SSV00169_cleaned/SSV00169_cleaned.1.fq', 'fastq_index_3/SSV00169_cleaned/SSV00169_cleaned.2.fq']	SSV00169_cleaned_raw.cram	15276403	0.95	SSV00169_cleaned.tsv.xz	46.71	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	773645	291	0.58	0.364844	286327	0.296828	208461	0.001352	1219	0.001112	969	0.019814	27985	0.015335	19124	0.000367	80	8.2e-05	17	0.000472	216	0.000208	149
SSV-KB-0021_cleaned	SSV-KB-0021_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	11639698	9936531	85.37	['fastq_index_3/SSV-KB-0021_cleaned/SSV-KB-0021_cleaned.2.fq', 'fastq_index_3/SSV-KB-0021_cleaned/SSV-KB-0021_cleaned.1.fq']	SSV-KB-0021_cleaned_raw.cram	5524164	0.95	SSV-KB-0021_cleaned.tsv.xz	47.46	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	131738	61	0.57	0.253937	55727	0.218283	40195	0.000975	235	0.000886	170	0.035635	3745	0.029031	2504	0.000132	48	8e-06	5	0.0005	59	0.000373	35
DSMC-KB-0118_cleaned	DSMC-KB-0118_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	64823160	56260238	86.79	['fastq_index_2/DSMC-KB-0118_cleaned/DSMC-KB-0118_cleaned.2.fq', 'fastq_index_2/DSMC-KB-0118_cleaned/DSMC-KB-0118_cleaned.1.fq']	DSMC-KB-0118_cleaned_raw.cram	30197146	0.95	DSMC-KB-0118_cleaned.tsv.xz	46.58	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	991844	327	0.58	0.267843	343757	0.225469	246937	0.001582	1545	0.00124	1216	0.028847	33967	0.022727	23231	0.000333	56	3.7e-05	9	0.000366	211	0.000157	155
DSM00283_cleaned	DSM00283_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-22	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	2325332	2014782	86.64	['output/fastq_index/DSM00283_cleaned/DSM00283_cleaned.2.fq', 'output/fastq_index/DSM00283_cleaned/DSM00283_cleaned.1.fq']	DSM00283_cleaned_raw.cram	1094714	0.95	DSM00283_cleaned.tsv.xz	47.08	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	178278	72	0.62	0.315878	67926	0.257716	51061	0.00167	323	0.001206	238	0.031194	6193	0.024154	4512	0.000292	41	2e-06	3	0.00049	52	0.000248	31
DSMC-KB-0075_cleaned	DSMC-KB-0075_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-23	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	39674146	35453537	89.36	['fastq_index_2/DSMC-KB-0075_cleaned/DSMC-KB-0075_cleaned.2.fq', 'fastq_index_2/DSMC-KB-0075_cleaned/DSMC-KB-0075_cleaned.1.fq']	DSMC-KB-0075_cleaned_raw.cram	19065173	0.95	DSMC-KB-0075_cleaned.tsv.xz	48.05	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	479089	173	0.64	0.283963	167783	0.249313	121160	0.001354	706	0.001192	547	0.037295	17269	0.030625	12298	0.000209	35	3.4e-05	4	0.000456	125	0.000217	96
R244-0_cleaned	R244-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-13	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	22231868	19938611	89.68	['fastq_index_2/R244-0_cleaned/R244-0_cleaned.1.fq', 'fastq_index_2/R244-0_cleaned/R244-0_cleaned.2.fq']	R244-0_cleaned_raw.cram	10647323	0.95	R244-0_cleaned.tsv.xz	47.89	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	326983	134	0.74	0.316577	128005	0.292586	98392	0.001506	534	0.001163	408	0.037968	11472	0.035174	8669	0.000255	52	1e-06	4	0.000658	115	0.000368	84
SSV-KB-0094_cleaned	SSV-KB-0094_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	32353816	23104464	71.41	['fastq_index_3/SSV-KB-0094_cleaned/SSV-KB-0094_cleaned.1.fq', 'fastq_index_3/SSV-KB-0094_cleaned/SSV-KB-0094_cleaned.2.fq']	SSV-KB-0094_cleaned_raw.cram	12445316	0.95	SSV-KB-0094_cleaned.tsv.xz	38.47	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	436972	235	0.61	0.360771	175736	0.291743	133241	0.001364	834	0.001108	639	0.018784	16357	0.014863	12006	0.000478	94	4.1e-05	20	0.000575	130	0.000381	85
S0189_cleaned	S0189_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	10811486	9841167	91.03	['fastq_index_3/S0189_cleaned/S0189_cleaned.1.fq', 'fastq_index_3/S0189_cleaned/S0189_cleaned.2.fq']	S0189_cleaned_raw.cram	5248069	0.95	S0189_cleaned.tsv.xz	48.54	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	363336	130	0.61	0.285332	125545	0.243054	93012	0.001306	544	0.000946	413	0.034922	14000	0.028559	10200	0.000321	36	2e-06	4	0.000547	115	0.000299	90
G329_cleaned	G329_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-06	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	25262276	22861219	90.5	['fastq_index_2/G329_cleaned/G329_cleaned.1.fq', 'fastq_index_2/G329_cleaned/G329_cleaned.2.fq']	G329_cleaned_raw.cram	12213035	0.95	G329_cleaned.tsv.xz	48.34	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	450051	157	0.66	0.316112	160286	0.273019	119249	0.001629	715	0.001198	546	0.040949	14701	0.034471	10222	0.000535	50	4e-06	6	0.000573	127	0.00029	88
SSV00164_cleaned	SSV00164_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	19894512	17438317	87.65	['fastq_index_3/SSV00164_cleaned/SSV00164_cleaned.1.fq', 'fastq_index_3/SSV00164_cleaned/SSV00164_cleaned.2.fq']	SSV00164_cleaned_raw.cram	9442998	0.95	SSV00164_cleaned.tsv.xz	47.47	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	463999	180	0.5	0.21705	172882	0.173318	123954	0.001113	754	0.001008	565	0.022196	17840	0.016019	11950	7.5e-05	39	1.4e-05	2	0.000129	135	7.2e-05	95
G310_cleaned	G310_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-06	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	26541488	23766285	89.54	['fastq_index_2/G310_cleaned/G310_cleaned.2.fq', 'fastq_index_2/G310_cleaned/G310_cleaned.1.fq']	G310_cleaned_raw.cram	12739941	0.95	G310_cleaned.tsv.xz	48.0	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	280252	130	0.8	0.361999	115916	0.335363	92261	0.001916	494	0.001751	401	0.029843	9334	0.028983	7080	0.000273	58	8.7e-05	11	0.000549	96	0.000395	68
R91-0_cleaned	R91-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	22018240	19461750	88.39	['fastq_index_4/R91-0_cleaned/R91-0_cleaned.1.fq', 'fastq_index_4/R91-0_cleaned/R91-0_cleaned.2.fq']	R91-0_cleaned_raw.cram	10478540	0.95	R91-0_cleaned.tsv.xz	47.59	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	392826	122	0.61	0.296942	138726	0.252873	109108	0.001526	643	0.001152	535	0.038982	14249	0.0301	10809	0.00057	39	1.7e-05	8	0.000549	100	0.000274	74
MN_121_cleaned	MN_121_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	16221338	14403400	88.79	['fastq_index/MN_121_cleaned/MN_121_cleaned.2.fq', 'fastq_index/MN_121_cleaned/MN_121_cleaned.1.fq']	MN_121_cleaned_raw.cram	7829128	0.95	MN_121_cleaned.tsv.xz	48.26	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	196322	79	0.58	0.26909	79500	0.217687	59164	0.002212	357	0.001252	265	0.031553	7647	0.022388	5083	0.001362	38	0.000301	5	0.001406	88	0.000462	62
DSMC-KB-0090_cleaned	DSMC-KB-0090_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	899928	778537	86.51	['fastq_index_1/DSMC-KB-0090_cleaned/DSMC-KB-0090_cleaned.1.fq', 'fastq_index_1/DSMC-KB-0090_cleaned/DSMC-KB-0090_cleaned.2.fq']	DSMC-KB-0090_cleaned_raw.cram	361250	0.95	DSMC-KB-0090_cleaned.tsv.xz	40.14	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	218083	146	0.56	0.287947	86002	0.232793	65284	0.001546	383	0.001137	310	0.026061	10281	0.021012	7468	0.000411	41	5.5e-05	5	0.000553	77	0.000281	48
SNUH-KB-0056_cleaned	SNUH-KB-0056_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	13957440	12110788	86.77	['fastq_index_3/SNUH-KB-0056_cleaned/SNUH-KB-0056_cleaned.2.fq', 'fastq_index_3/SNUH-KB-0056_cleaned/SNUH-KB-0056_cleaned.1.fq']	SNUH-KB-0056_cleaned_raw.cram	6572372	0.95	SNUH-KB-0056_cleaned.tsv.xz	47.09	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	192589	56	0.62	0.316622	71215	0.263255	54665	0.001493	314	0.001197	243	0.03651	8007	0.028663	5825	0.000246	28	6e-06	5	0.000465	64	0.000212	47
R43-0_cleaned	R43-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	29327786	25797337	87.96	['fastq_index_4/R43-0_cleaned/R43-0_cleaned.1.fq', 'fastq_index_4/R43-0_cleaned/R43-0_cleaned.2.fq']	R43-0_cleaned_raw.cram	13779991	0.95	R43-0_cleaned.tsv.xz	46.99	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	754516	253	0.55	0.307743	269662	0.234814	187094	0.001453	1218	0.00105	936	0.033678	23987	0.023854	16110	0.000221	63	8e-06	13	0.00054	173	0.000249	122
R46-0_cleaned	R46-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	29617738	25838896	87.24	['fastq_index_4/R46-0_cleaned/R46-0_cleaned.2.fq', 'fastq_index_4/R46-0_cleaned/R46-0_cleaned.1.fq']	R46-0_cleaned_raw.cram	13879014	0.95	R46-0_cleaned.tsv.xz	46.86	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	666790	222	0.58	0.287037	231960	0.236588	164266	0.001454	1016	0.001083	766	0.03167	23204	0.024934	16107	0.000435	63	1.6e-05	10	0.000573	187	0.000259	123
Duplicate_of_S0298_DMN_60_cleaned	Duplicate_of_S0298_DMN_60_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	11771396	9734754	82.7	['fastq_index_1/Duplicate_of_S0298_DMN_60_cleaned/Duplicate_of_S0298_DMN_60_cleaned.1.fq', 'fastq_index_1/Duplicate_of_S0298_DMN_60_cleaned/Duplicate_of_S0298_DMN_60_cleaned.2.fq']	Duplicate_of_S0298_DMN_60_cleaned_raw.cram	5371541	0.95	Duplicate_of_S0298_DMN_60_cleaned.tsv.xz	45.63	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	342590	118	0.63	0.309513	131840	0.258951	94440	0.001698	603	0.001371	461	0.033524	12338	0.026377	8605	0.000402	44	2.1e-05	4	0.000421	115	0.00016	73
DSM00217_cleaned	DSM00217_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-21	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	24694940	22135561	89.64	['output/fastq_index/DSM00217_cleaned/DSM00217_cleaned.2.fq', 'output/fastq_index/DSM00217_cleaned/DSM00217_cleaned.1.fq']	DSM00217_cleaned_raw.cram	11869419	0.95	DSM00217_cleaned.tsv.xz	48.06	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	524298	179	0.62	0.295419	188244	0.249536	131018	0.001534	725	0.001255	546	0.033151	18047	0.026275	12242	0.00031	44	3.9e-05	7	0.000532	146	0.000215	99
SSV-KB-0003_cleaned	SSV-KB-0003_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	15774086	13704187	86.88	['fastq_index_3/SSV-KB-0003_cleaned/SSV-KB-0003_cleaned.2.fq', 'fastq_index_3/SSV-KB-0003_cleaned/SSV-KB-0003_cleaned.1.fq']	SSV-KB-0003_cleaned_raw.cram	7452734	0.95	SSV-KB-0003_cleaned.tsv.xz	47.25	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	612328	266	0.61	0.281138	221491	0.239262	161175	0.001767	1014	0.001205	822	0.0331	22234	0.026346	15791	0.000508	39	2.1e-05	6	0.00035	131	0.000158	94
SNUH-KB-0197_cleaned	SNUH-KB-0197_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	29449830	26533509	90.1	['fastq_index_3/SNUH-KB-0197_cleaned/SNUH-KB-0197_cleaned.1.fq', 'fastq_index_3/SNUH-KB-0197_cleaned/SNUH-KB-0197_cleaned.2.fq']	SNUH-KB-0197_cleaned_raw.cram	14211655	0.95	SNUH-KB-0197_cleaned.tsv.xz	48.26	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	459966	160	0.67	0.306651	158129	0.262942	116173	0.001313	718	0.001	563	0.045174	16550	0.037591	11905	0.000299	46	5e-06	7	0.000547	117	0.0003	82
R55-0_cleaned	R55-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	48404116	43572186	90.02	['fastq_index_4/R55-0_cleaned/R55-0_cleaned.1.fq', 'fastq_index_4/R55-0_cleaned/R55-0_cleaned.2.fq']	R55-0_cleaned_raw.cram	23529499	0.95	R55-0_cleaned.tsv.xz	48.61	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	543449	217	0.59	0.314924	198333	0.246894	149268	0.001245	878	0.000839	690	0.040193	19758	0.028256	14337	0.000298	64	2e-06	8	0.000557	170	0.000322	122
R282-0_cleaned	R282-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	21844126	16610342	76.04	['fastq_index_2/R282-0_cleaned/R282-0_cleaned.2.fq', 'fastq_index_2/R282-0_cleaned/R282-0_cleaned.1.fq']	R282-0_cleaned_raw.cram	9256315	0.95	R282-0_cleaned.tsv.xz	42.37	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	208693	73	0.58	0.327515	73643	0.266996	58862	0.001409	331	0.001019	268	0.019914	6490	0.015924	5121	0.000345	43	1e-06	7	0.000322	61	0.000131	37
G301_cleaned	G301_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-06	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	17271820	15138171	87.65	['fastq_index_2/G301_cleaned/G301_cleaned.2.fq', 'fastq_index_2/G301_cleaned/G301_cleaned.1.fq']	G301_cleaned_raw.cram	8230294	0.95	G301_cleaned.tsv.xz	47.65	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	487630	165	0.65	0.313756	183408	0.274764	133010	0.001442	753	0.001159	576	0.031501	15852	0.025788	10598	0.00023	45	5e-06	6	0.00062	157	0.000385	116
SNUH-KB-0080_cleaned	SNUH-KB-0080_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	38090098	34156371	89.67	['fastq_index_3/SNUH-KB-0080_cleaned/SNUH-KB-0080_cleaned.2.fq', 'fastq_index_3/SNUH-KB-0080_cleaned/SNUH-KB-0080_cleaned.1.fq']	SNUH-KB-0080_cleaned_raw.cram	18390111	0.95	SNUH-KB-0080_cleaned.tsv.xz	48.28	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	583703	209	0.71	0.369218	218545	0.333813	158180	0.00156	891	0.00143	696	0.034553	21646	0.028221	14973	0.000669	58	0.00012	11	0.000682	186	0.00039	135
DSMC-KB-0164_cleaned	DSMC-KB-0164_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-04	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	35632936	27053399	75.92	['fastq_index_2/DSMC-KB-0164_cleaned/DSMC-KB-0164_cleaned.2.fq', 'fastq_index_2/DSMC-KB-0164_cleaned/DSMC-KB-0164_cleaned.1.fq']	DSMC-KB-0164_cleaned_raw.cram	13812887	0.95	DSMC-KB-0164_cleaned.tsv.xz	38.76	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	342055	130	0.66	0.335168	131536	0.276781	101591	0.001333	583	0.001032	446	0.048331	12901	0.032243	8962	0.000117	69	6e-06	10	0.000326	104	0.000285	72
S0228_cleaned	S0228_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	37452284	32182100	85.93	['fastq_index_3/S0228_cleaned/S0228_cleaned.2.fq', 'fastq_index_3/S0228_cleaned/S0228_cleaned.1.fq']	S0228_cleaned_raw.cram	17281825	0.95	S0228_cleaned.tsv.xz	46.14	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	886204	313	0.56	0.278507	315347	0.236424	231950	0.001723	1496	0.001315	1204	0.022669	30998	0.018582	22053	0.000301	66	1.5e-05	10	0.000404	188	0.000148	133
MN_178_cleaned	MN_178_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	16599210	14768821	88.97	['fastq_index/MN_178_cleaned/MN_178_cleaned.1.fq', 'fastq_index/MN_178_cleaned/MN_178_cleaned.2.fq']	MN_178_cleaned_raw.cram	7983831	0.95	MN_178_cleaned.tsv.xz	48.1	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	343568	108	0.63	0.289103	127267	0.248115	96332	0.001555	605	0.001054	474	0.03651	11746	0.030099	8595	0.00043	50	1e-06	5	0.000539	117	0.000308	79
S0254_cleaned	S0254_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	37678030	33262100	88.28	['fastq_index_3/S0254_cleaned/S0254_cleaned.2.fq', 'fastq_index_3/S0254_cleaned/S0254_cleaned.1.fq']	S0254_cleaned_raw.cram	17882032	0.95	S0254_cleaned.tsv.xz	47.46	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	837393	240	0.61	0.295748	286311	0.248002	199915	0.001473	1223	0.001118	913	0.029902	26658	0.024667	18439	0.000237	48	1e-06	5	0.000399	212	0.000184	149
SSV-KB-0020_cleaned	SSV-KB-0020_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	38430534	32504013	84.58	['fastq_index_3/SSV-KB-0020_cleaned/SSV-KB-0020_cleaned.1.fq', 'fastq_index_3/SSV-KB-0020_cleaned/SSV-KB-0020_cleaned.2.fq']	SSV-KB-0020_cleaned_raw.cram	17481941	0.95	SSV-KB-0020_cleaned.tsv.xz	45.49	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	601357	203	0.62	0.292123	213034	0.246292	159814	0.001566	932	0.000996	744	0.03428	21132	0.028446	15734	0.000852	63	3e-06	9	0.000643	158	0.00025	112
G373_cleaned	G373_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-07	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	32595346	29625040	90.89	['fastq_index_2/G373_cleaned/G373_cleaned.2.fq', 'fastq_index_2/G373_cleaned/G373_cleaned.1.fq']	G373_cleaned_raw.cram	15825675	0.95	G373_cleaned.tsv.xz	48.55	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	501040	176	0.59	0.295967	179036	0.24813	127446	0.001145	764	0.000844	585	0.038557	16994	0.03	11759	0.000207	40	1e-06	8	0.000557	138	0.000325	107
SSV-KB-0056_cleaned	SSV-KB-0056_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	46442810	40338709	86.86	['fastq_index_3/SSV-KB-0056_cleaned/SSV-KB-0056_cleaned.2.fq', 'fastq_index_3/SSV-KB-0056_cleaned/SSV-KB-0056_cleaned.1.fq']	SSV-KB-0056_cleaned_raw.cram	21785649	0.95	SSV-KB-0056_cleaned.tsv.xz	46.91	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	910788	322	0.46	0.241154	322932	0.191535	245278	0.001208	1425	0.000914	1156	0.019272	31036	0.015651	22642	0.000235	68	1.2e-05	9	0.000383	233	0.000222	171
R200-0_cleaned	R200-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-13	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	4215574	3281253	77.84	['fastq_index_2/R200-0_cleaned/R200-0_cleaned.2.fq', 'fastq_index_2/R200-0_cleaned/R200-0_cleaned.1.fq']	R200-0_cleaned_raw.cram	1775804	0.95	R200-0_cleaned.tsv.xz	42.12	2.0.22	2026-04-15	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	342523	206	0.2	0.16305	128855	0.085047	94670	0.000658	655	0.000441	513	0.008873	13272	0.005591	9811	0.00011	40	5e-06	5	0.000184	90	7e-05	58
R73-0_cleaned	R73-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	62460390	54786957	87.71	['fastq_index_4/R73-0_cleaned/R73-0_cleaned.1.fq', 'fastq_index_4/R73-0_cleaned/R73-0_cleaned.2.fq']	R73-0_cleaned_raw.cram	29498282	0.95	R73-0_cleaned.tsv.xz	47.23	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	1041833	372	0.62	0.305075	362130	0.260226	261584	0.001823	1729	0.001491	1399	0.027937	33558	0.022906	23763	0.000366	69	1e-05	13	0.00039	208	0.000163	150
SNUH-KB-0078_cleaned	SNUH-KB-0078_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	35101608	30752483	87.61	['fastq_index_3/SNUH-KB-0078_cleaned/SNUH-KB-0078_cleaned.2.fq', 'fastq_index_3/SNUH-KB-0078_cleaned/SNUH-KB-0078_cleaned.1.fq']	SNUH-KB-0078_cleaned_raw.cram	16602223	0.95	SNUH-KB-0078_cleaned.tsv.xz	47.3	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	762935	231	0.59	0.292105	269197	0.246916	192639	0.001573	1159	0.001189	911	0.028077	26808	0.022488	18050	0.000303	55	1.1e-05	6	0.000518	201	0.00021	145
DSM00234_cleaned	DSM00234_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-21	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	1913304	1692813	88.48	['output/fastq_index/DSM00234_cleaned/DSM00234_cleaned.2.fq', 'output/fastq_index/DSM00234_cleaned/DSM00234_cleaned.1.fq']	DSM00234_cleaned_raw.cram	919516	0.95	DSM00234_cleaned.tsv.xz	48.06	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	160922	75	0.68	0.37259	64843	0.322929	51102	0.001992	300	0.001226	231	0.032511	6555	0.02701	4999	0.000826	52	7.2e-05	6	0.000976	73	0.000532	47
SNUH-KB-0072_cleaned	SNUH-KB-0072_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	26305712	22986861	87.38	['fastq_index_3/SNUH-KB-0072_cleaned/SNUH-KB-0072_cleaned.2.fq', 'fastq_index_3/SNUH-KB-0072_cleaned/SNUH-KB-0072_cleaned.1.fq']	SNUH-KB-0072_cleaned_raw.cram	12404437	0.95	SNUH-KB-0072_cleaned.tsv.xz	47.15	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	786587	295	0.63	0.30182	286006	0.256981	203751	0.001978	1344	0.001419	1055	0.027515	25917	0.022256	17478	0.000569	55	3e-05	8	0.000546	176	0.000177	118
D74_cleaned	D74_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-20	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	23993464	20998848	87.52	['output/fastq_index/D74_cleaned/D74_cleaned.1.fq', 'output/fastq_index/D74_cleaned/D74_cleaned.2.fq']	D74_cleaned_raw.cram	11340827	0.95	D74_cleaned.tsv.xz	47.27	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	694875	271	0.6	0.288334	251457	0.241853	176897	0.001673	1120	0.001377	850	0.030837	24790	0.023612	16833	0.000299	46	5.3e-05	6	0.000378	154	0.000207	102
R159-0_cleaned	R159-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	16392674	14716045	89.77	['fastq_index_4/R159-0_cleaned/R159-0_cleaned.1.fq', 'fastq_index_4/R159-0_cleaned/R159-0_cleaned.2.fq']	R159-0_cleaned_raw.cram	7833483	0.95	R159-0_cleaned.tsv.xz	47.79	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	491874	226	0.6	0.330437	180615	0.270053	134179	0.001505	803	0.001173	642	0.039836	19602	0.030776	14364	0.000155	46	8e-06	10	0.000483	121	0.000263	86
KNU00077_cleaned	KNU00077_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	65293096	58015972	88.85	['fastq_index/KNU00077_cleaned/KNU00077_cleaned.1.fq', 'fastq_index/KNU00077_cleaned/KNU00077_cleaned.2.fq']	KNU00077_cleaned_raw.cram	31059417	0.95	KNU00077_cleaned.tsv.xz	47.57	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	646469	274	0.67	0.317045	240225	0.277079	173819	0.001696	1050	0.001299	811	0.036605	22843	0.030288	15775	0.00043	75	8e-06	14	0.000477	175	0.00022	119
igAN_151_cleaned	igAN_151_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	13759258	11983481	87.09	['fastq_index/igAN_151_cleaned/igAN_151_cleaned.2.fq', 'fastq_index/igAN_151_cleaned/igAN_151_cleaned.1.fq']	igAN_151_cleaned_raw.cram	6525960	0.95	igAN_151_cleaned.tsv.xz	47.43	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	457610	143	0.65	0.30793	161727	0.266222	120857	0.001409	739	0.001108	580	0.036687	15266	0.031264	11578	0.000373	47	1e-06	4	0.000556	146	0.000314	100
MN_6_cleaned	MN_6_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	13251244	11236894	84.8	['fastq_index/MN_6_cleaned/MN_6_cleaned.2.fq', 'fastq_index/MN_6_cleaned/MN_6_cleaned.1.fq']	MN_6_cleaned_raw.cram	6168073	0.95	MN_6_cleaned.tsv.xz	46.55	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	357600	136	0.65	0.328465	134560	0.273498	99854	0.001537	594	0.001108	461	0.036534	14045	0.027719	9996	0.000373	48	7e-06	3	0.000608	105	0.000174	68
R164-0_cleaned	R164-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	22188658	20120279	90.68	['fastq_index_4/R164-0_cleaned/R164-0_cleaned.1.fq', 'fastq_index_4/R164-0_cleaned/R164-0_cleaned.2.fq']	R164-0_cleaned_raw.cram	10711872	0.95	R164-0_cleaned.tsv.xz	48.28	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	277078	119	0.68	0.300311	99293	0.26853	78818	0.001087	439	0.000917	366	0.045042	11880	0.038866	9217	0.000204	36	1e-06	3	0.000615	80	0.000317	56
S0237_cleaned	S0237_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-23	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	34771764	30456390	87.59	['fastq_index_3/S0237_cleaned/S0237_cleaned.1.fq', 'fastq_index_3/S0237_cleaned/S0237_cleaned.2.fq']	S0237_cleaned_raw.cram	16303059	0.95	S0237_cleaned.tsv.xz	46.89	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	510519	177	0.52	0.27836	191452	0.22606	140947	0.001133	830	0.000945	641	0.029717	17627	0.022957	12028	0.000163	57	4e-06	10	0.000306	138	0.000204	94
R362-0_cleaned	R362-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	41930346	36211150	86.36	['fastq_index_4/R362-0_cleaned/R362-0_cleaned.1.fq', 'fastq_index_4/R362-0_cleaned/R362-0_cleaned.2.fq']	R362-0_cleaned_raw.cram	19484264	0.95	R362-0_cleaned.tsv.xz	46.47	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	758679	247	0.61	0.279261	278170	0.235407	197363	0.001454	1332	0.001002	1009	0.037999	22231	0.031612	15138	0.000652	86	7e-06	26	0.000531	181	0.000307	125
DSM00263_cleaned	DSM00263_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-21	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	1990238	1763803	88.62	['output/fastq_index/DSM00263_cleaned/DSM00263_cleaned.2.fq', 'output/fastq_index/DSM00263_cleaned/DSM00263_cleaned.1.fq']	DSM00263_cleaned_raw.cram	952607	0.95	DSM00263_cleaned.tsv.xz	47.86	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	124452	58	0.67	0.290904	48501	0.253163	38582	0.001547	227	0.001015	165	0.039127	5055	0.033178	3833	0.00055	35	0.0	1	0.000445	55	0.000221	31
SNUH-KB-0052_cleaned	SNUH-KB-0052_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	37566530	32722718	87.11	['fastq_index_3/SNUH-KB-0052_cleaned/SNUH-KB-0052_cleaned.2.fq', 'fastq_index_3/SNUH-KB-0052_cleaned/SNUH-KB-0052_cleaned.1.fq']	SNUH-KB-0052_cleaned_raw.cram	17673504	0.95	SNUH-KB-0052_cleaned.tsv.xz	47.05	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	692805	243	0.62	0.30332	243649	0.261581	177959	0.00174	1090	0.001496	876	0.033131	24108	0.026368	16832	0.000317	46	5.8e-05	10	0.00028	138	0.000126	103
R292-0_cleaned	R292-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	18597220	16238084	87.31	['fastq_index_2/R292-0_cleaned/R292-0_cleaned.1.fq', 'fastq_index_2/R292-0_cleaned/R292-0_cleaned.2.fq']	R292-0_cleaned_raw.cram	8694031	0.95	R292-0_cleaned.tsv.xz	46.75	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	269025	105	0.71	0.303351	102674	0.267174	78940	0.00109	434	0.000779	319	0.04218	8814	0.037466	6602	0.000276	46	4e-06	6	0.000434	80	0.000297	59
S0180_cleaned	S0180_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	42224022	38238399	90.56	['fastq_index_3/S0180_cleaned/S0180_cleaned.1.fq', 'fastq_index_3/S0180_cleaned/S0180_cleaned.2.fq']	S0180_cleaned_raw.cram	20452434	0.95	S0180_cleaned.tsv.xz	48.44	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	319614	133	0.62	0.279128	109197	0.241554	85123	0.001488	494	0.000932	389	0.033986	12274	0.027692	9059	0.000522	66	3.7e-05	10	0.00058	103	0.000362	66
SSV-KB-0091_cleaned	SSV-KB-0091_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	43461752	39221685	90.24	['fastq_index_3/SSV-KB-0091_cleaned/SSV-KB-0091_cleaned.2.fq', 'fastq_index_3/SSV-KB-0091_cleaned/SSV-KB-0091_cleaned.1.fq']	SSV-KB-0091_cleaned_raw.cram	20974548	0.95	SSV-KB-0091_cleaned.tsv.xz	48.26	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	698642	308	0.66	0.290517	254150	0.258995	191389	0.001211	1116	0.000971	905	0.037045	26036	0.032614	18544	0.000148	61	1e-06	7	0.000491	206	0.000346	147
R154-0_cleaned	R154-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	22076428	19886574	90.08	['fastq_index_4/R154-0_cleaned/R154-0_cleaned.2.fq', 'fastq_index_4/R154-0_cleaned/R154-0_cleaned.1.fq']	R154-0_cleaned_raw.cram	10700054	0.95	R154-0_cleaned.tsv.xz	48.47	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	241714	86	0.66	0.291332	83724	0.251048	63347	0.001715	395	0.001373	300	0.040464	7535	0.030994	5616	0.000866	34	6.5e-05	3	0.000484	70	0.00032	43
DSM00222_cleaned	DSM00222_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-21	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	40114160	35409880	88.27	['output/fastq_index/DSM00222_cleaned/DSM00222_cleaned.2.fq', 'output/fastq_index/DSM00222_cleaned/DSM00222_cleaned.1.fq']	DSM00222_cleaned_raw.cram	18934795	0.95	DSM00222_cleaned.tsv.xz	47.2	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	561052	209	0.64	0.309366	208679	0.274795	150753	0.001283	865	0.001033	668	0.027061	19224	0.022914	13114	0.000364	69	1.5e-05	11	0.000466	166	0.000259	115
DSMC-KB-0177_cleaned	DSMC-KB-0177_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-04	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	33440646	30088087	89.97	['fastq_index_2/DSMC-KB-0177_cleaned/DSMC-KB-0177_cleaned.2.fq', 'fastq_index_2/DSMC-KB-0177_cleaned/DSMC-KB-0177_cleaned.1.fq']	DSMC-KB-0177_cleaned_raw.cram	15985511	0.95	DSMC-KB-0177_cleaned.tsv.xz	47.8	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	467804	159	0.58	0.31358	172013	0.251925	125124	0.001369	725	0.000972	539	0.026618	14897	0.021208	10105	0.000431	57	1.2e-05	6	0.00049	136	0.000262	95
G342_cleaned	G342_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	21683804	19204739	88.57	['fastq_index_4/G342_cleaned/G342_cleaned.1.fq', 'fastq_index_4/G342_cleaned/G342_cleaned.2.fq']	G342_cleaned_raw.cram	10283829	0.95	G342_cleaned.tsv.xz	47.43	2.0.22	2026-04-15	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	720495	261	0.59	0.299112	254277	0.247255	185371	0.001551	1128	0.001223	904	0.028674	24870	0.022907	17769	0.000231	49	1e-05	6	0.000445	169	0.000202	127
G408_cleaned	G408_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-16	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	20702742	18295256	88.37	['last3fastq/G408_cleaned/G408_cleaned.2.fq', 'last3fastq/G408_cleaned/G408_cleaned.1.fq']	G408_cleaned_raw.cram	9844519	0.95	G408_cleaned.tsv.xz	47.55	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	397724	163	0.64	0.292122	143077	0.251691	103753	0.001739	649	0.001493	512	0.037756	15750	0.028771	10843	0.000337	32	5e-05	2	0.000274	87	0.000157	60
DSM00220_cleaned	DSM00220_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-21	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	31646634	28027251	88.56	['output/fastq_index/DSM00220_cleaned/DSM00220_cleaned.1.fq', 'output/fastq_index/DSM00220_cleaned/DSM00220_cleaned.2.fq']	DSM00220_cleaned_raw.cram	14924606	0.95	DSM00220_cleaned.tsv.xz	47.16	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	665714	233	0.59	0.273994	231169	0.235239	172855	0.001439	1002	0.001113	812	0.024909	21754	0.022088	16312	0.000311	45	2e-06	5	0.000478	179	0.00022	131
D83_cleaned	D83_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-21	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	22567918	20149500	89.28	['output/fastq_index/D83_cleaned/D83_cleaned.2.fq', 'output/fastq_index/D83_cleaned/D83_cleaned.1.fq']	D83_cleaned_raw.cram	10837828	0.95	D83_cleaned.tsv.xz	48.02	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	394878	155	0.62	0.296005	152578	0.244794	105673	0.001372	664	0.001143	479	0.041459	14298	0.030511	9281	0.000314	51	8.5e-05	9	0.000672	108	0.000304	82
KNU00076_cleaned	KNU00076_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	68483722	61064127	89.17	['fastq_index/KNU00076_cleaned/KNU00076_cleaned.2.fq', 'fastq_index/KNU00076_cleaned/KNU00076_cleaned.1.fq']	KNU00076_cleaned_raw.cram	32661477	0.95	KNU00076_cleaned.tsv.xz	47.69	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	827439	257	0.64	0.306042	293176	0.259693	218170	0.001412	1300	0.001071	1010	0.030494	27614	0.024808	19442	0.00036	79	2e-06	13	0.000518	211	0.000298	154
igAN_185_cleaned	igAN_185_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	14163574	12090244	85.36	['fastq_index/igAN_185_cleaned/igAN_185_cleaned.1.fq', 'fastq_index/igAN_185_cleaned/igAN_185_cleaned.2.fq']	igAN_185_cleaned_raw.cram	6626026	0.95	igAN_185_cleaned.tsv.xz	46.78	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	672860	247	0.56	0.282539	239849	0.229341	179279	0.001811	1112	0.001148	883	0.026356	22631	0.021247	16627	0.00054	58	1.6e-05	7	0.000512	175	0.000209	124
G104_cleaned	G104_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-05	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	12592784	10422519	82.77	['fastq_index_2/G104_cleaned/G104_cleaned.1.fq', 'fastq_index_2/G104_cleaned/G104_cleaned.2.fq']	G104_cleaned_raw.cram	5850104	0.95	G104_cleaned.tsv.xz	46.46	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	414470	150	0.59	0.266295	154112	0.222955	110537	0.001399	636	0.001195	498	0.032347	15146	0.025038	10332	0.000269	35	6e-05	5	0.000471	120	0.000219	87
S0020_cleaned	S0020_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	37491902	32798205	87.48	['fastq_index_4/S0020_cleaned/S0020_cleaned.2.fq', 'fastq_index_4/S0020_cleaned/S0020_cleaned.1.fq']	S0020_cleaned_raw.cram	17537567	0.95	S0020_cleaned.tsv.xz	46.78	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	990774	307	0.6	0.283524	334387	0.237646	240662	0.001572	1570	0.001181	1241	0.025465	32770	0.020412	22976	0.000293	48	1.7e-05	5	0.000492	208	0.000201	148
S0047_cleaned	S0047_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	40489268	35487295	87.65	['fastq_index_4/S0047_cleaned/S0047_cleaned.1.fq', 'fastq_index_4/S0047_cleaned/S0047_cleaned.2.fq']	S0047_cleaned_raw.cram	18981251	0.95	S0047_cleaned.tsv.xz	46.88	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	216428	91	0.78	0.314348	87737	0.291426	68351	0.001883	444	0.001717	344	0.031593	6961	0.029517	5177	0.000214	62	7.8e-05	17	0.000255	79	0.000188	43
DSMC-KB-0174_cleaned	DSMC-KB-0174_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-04	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	33799176	29011587	85.84	['fastq_index_2/DSMC-KB-0174_cleaned/DSMC-KB-0174_cleaned.1.fq', 'fastq_index_2/DSMC-KB-0174_cleaned/DSMC-KB-0174_cleaned.2.fq']	DSMC-KB-0174_cleaned_raw.cram	15670356	0.95	DSMC-KB-0174_cleaned.tsv.xz	46.36	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	999927	356	0.56	0.265676	344758	0.215767	250166	0.001589	1673	0.001208	1344	0.023837	32911	0.018055	22942	0.000299	55	5.1e-05	6	0.000353	214	0.000145	152
SSV-KB-0068_cleaned	SSV-KB-0068_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	29368054	25334309	86.26	['fastq_index_3/SSV-KB-0068_cleaned/SSV-KB-0068_cleaned.1.fq', 'fastq_index_3/SSV-KB-0068_cleaned/SSV-KB-0068_cleaned.2.fq']	SSV-KB-0068_cleaned_raw.cram	13748552	0.95	SSV-KB-0068_cleaned.tsv.xz	46.81	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	509227	226	0.15	0.107908	192786	0.064735	149066	0.000319	841	0.000263	686	0.006484	19992	0.005457	14366	7.5e-05	75	4e-06	12	0.000115	155	7.5e-05	111
control_1008_cleaned	control_1008_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-17	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	18675652	16695607	89.4	['output/fastq_index/control_1008_cleaned/control_1008_cleaned.2.fq', 'output/fastq_index/control_1008_cleaned/control_1008_cleaned.1.fq']	control_1008_cleaned_raw.cram	9026024	0.95	control_1008_cleaned.tsv.xz	48.33	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	353015	106	0.64	0.312759	127867	0.269407	98495	0.00142	568	0.00118	440	0.035512	12729	0.028696	9563	0.000179	37	2e-06	5	0.000542	106	0.000339	75
R213-0_cleaned	R213-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-13	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	24363198	21394390	87.81	['fastq_index_2/R213-0_cleaned/R213-0_cleaned.2.fq', 'fastq_index_2/R213-0_cleaned/R213-0_cleaned.1.fq']	R213-0_cleaned_raw.cram	11441075	0.95	R213-0_cleaned.tsv.xz	46.96	2.0.22	2026-04-15	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	542196	173	0.62	0.300636	203979	0.256675	147277	0.00135	882	0.001082	677	0.037079	20488	0.030285	14204	0.000232	58	1.3e-05	11	0.00059	151	0.000329	108
G406_cleaned	G406_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-23	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	37662694	33222735	88.21	['fastq_index/G406_cleaned/G406_cleaned.2.fq', 'fastq_index/G406_cleaned/G406_cleaned.1.fq']	G406_cleaned_raw.cram	17745160	0.95	G406_cleaned.tsv.xz	47.12	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	508413	204	0.63	0.284766	179958	0.24088	130479	0.001174	765	0.000895	610	0.038672	19666	0.030936	13767	0.000264	49	0.0	1	0.000592	144	0.000332	103
G399_cleaned	G399_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-07	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	38897222	33854542	87.04	['fastq_index_2/G399_cleaned/G399_cleaned.2.fq', 'fastq_index_2/G399_cleaned/G399_cleaned.1.fq']	G399_cleaned_raw.cram	18124589	0.95	G399_cleaned.tsv.xz	46.6	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	966107	288	0.6	0.291562	329417	0.241903	234637	0.00142	1420	0.001103	1109	0.026461	31299	0.022215	21921	0.000188	39	4e-06	1	0.000397	199	0.000201	147
R13-0_cleaned	R13-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-23	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	34527510	29156671	84.44	['fastq_index_4/R13-0_cleaned/R13-0_cleaned.1.fq', 'fastq_index_4/R13-0_cleaned/R13-0_cleaned.2.fq']	R13-0_cleaned_raw.cram	15646982	0.95	R13-0_cleaned.tsv.xz	45.32	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	589347	229	0.66	0.315828	221682	0.276203	174373	0.001577	1060	0.00132	865	0.037449	20674	0.030856	15814	0.000222	69	1.7e-05	19	0.000469	159	0.000314	112
DSMC-KB-0132_cleaned	DSMC-KB-0132_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	34685382	31249060	90.09	['fastq_index_2/DSMC-KB-0132_cleaned/DSMC-KB-0132_cleaned.2.fq', 'fastq_index_2/DSMC-KB-0132_cleaned/DSMC-KB-0132_cleaned.1.fq']	DSMC-KB-0132_cleaned_raw.cram	16699653	0.95	DSMC-KB-0132_cleaned.tsv.xz	48.15	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	505373	177	0.63	0.282283	179884	0.246799	128903	0.001384	798	0.001079	588	0.033882	18093	0.027079	12336	0.000351	59	3e-05	7	0.000466	148	0.00029	95
MN_BRMKID721_cleaned	MN_BRMKID721_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	17183194	15159412	88.22	['fastq_index/MN_BRMKID721_cleaned/MN_BRMKID721_cleaned.2.fq', 'fastq_index/MN_BRMKID721_cleaned/MN_BRMKID721_cleaned.1.fq']	MN_BRMKID721_cleaned_raw.cram	8231176	0.95	MN_BRMKID721_cleaned.tsv.xz	47.9	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	442334	143	0.63	0.322089	161672	0.268249	113926	0.001564	702	0.001109	525	0.031211	15603	0.025919	10970	0.000392	41	0.0	4	0.000477	123	0.000222	91
R214-0_cleaned	R214-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-13	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	23162850	20524916	88.61	['fastq_index_2/R214-0_cleaned/R214-0_cleaned.2.fq', 'fastq_index_2/R214-0_cleaned/R214-0_cleaned.1.fq']	R214-0_cleaned_raw.cram	11019686	0.95	R214-0_cleaned.tsv.xz	47.57	2.0.22	2026-04-15	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	574647	220	0.61	0.314091	207640	0.268148	154392	0.00143	924	0.001015	717	0.030959	22203	0.024773	15977	0.000349	60	8e-06	6	0.000534	148	0.000305	108
R288-0_cleaned	R288-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	23041542	20201710	87.68	['fastq_index_2/R288-0_cleaned/R288-0_cleaned.2.fq', 'fastq_index_2/R288-0_cleaned/R288-0_cleaned.1.fq']	R288-0_cleaned_raw.cram	10882517	0.95	R288-0_cleaned.tsv.xz	47.23	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	729441	302	0.68	0.297637	262495	0.261727	195409	0.001867	1300	0.001506	1046	0.032605	24407	0.030083	17709	0.000595	59	6.4e-05	4	0.000452	160	0.000226	117
SSV-KB-0022_cleaned	SSV-KB-0022_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	13798832	12556480	91.0	['fastq_index_3/SSV-KB-0022_cleaned/SSV-KB-0022_cleaned.1.fq', 'fastq_index_3/SSV-KB-0022_cleaned/SSV-KB-0022_cleaned.2.fq']	SSV-KB-0022_cleaned_raw.cram	6728859	0.95	SSV-KB-0022_cleaned.tsv.xz	48.76	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	308559	105	0.59	0.272068	110233	0.234861	78772	0.001046	464	0.000865	349	0.040774	11603	0.032829	8026	0.00023	32	6e-06	4	0.000548	88	0.000331	64
SNUH-KB-0047_cleaned	SNUH-KB-0047_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	20852094	17398262	83.44	['fastq_index_3/SNUH-KB-0047_cleaned/SNUH-KB-0047_cleaned.2.fq', 'fastq_index_3/SNUH-KB-0047_cleaned/SNUH-KB-0047_cleaned.1.fq']	SNUH-KB-0047_cleaned_raw.cram	9472658	0.95	SNUH-KB-0047_cleaned.tsv.xz	45.43	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	153973	53	0.72	0.336432	62624	0.300896	48716	0.001838	328	0.001569	243	0.029403	3694	0.026964	2833	0.000319	49	0.000105	12	0.000371	64	0.000198	33
R286-0_cleaned	R286-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	20059738	17087498	85.18	['fastq_index_2/R286-0_cleaned/R286-0_cleaned.2.fq', 'fastq_index_2/R286-0_cleaned/R286-0_cleaned.1.fq']	R286-0_cleaned_raw.cram	9255960	0.95	R286-0_cleaned.tsv.xz	46.14	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	543954	206	0.62	0.326156	197223	0.273902	149708	0.001997	865	0.001402	677	0.021312	17770	0.017452	13154	0.000427	62	3e-06	5	0.000442	156	0.000219	108
G469_cleaned	G469_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	2406468	1824550	75.82	['fastq_index/G469_cleaned/G469_cleaned.1.fq', 'fastq_index/G469_cleaned/G469_cleaned.2.fq']	G469_cleaned_raw.cram	740225	0.95	G469_cleaned.tsv.xz	30.76	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	246662	143	0.52	0.276738	96150	0.210643	70494	0.001126	444	0.000835	351	0.027932	10217	0.02044	7071	0.000194	47	2.4e-05	9	0.000502	84	0.000237	57
G387_cleaned	G387_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-07	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	31180284	23940536	76.78	['fastq_index_2/G387_cleaned/G387_cleaned.1.fq', 'fastq_index_2/G387_cleaned/G387_cleaned.2.fq']	G387_cleaned_raw.cram	12823651	0.95	G387_cleaned.tsv.xz	41.13	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	288805	145	0.59	0.329705	115738	0.270812	92131	0.001345	535	0.000999	433	0.029114	9912	0.02188	7462	0.000326	79	1.8e-05	13	0.000456	93	0.000254	54
DSMC-KB-0145_cleaned	DSMC-KB-0145_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-04	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	9119996	7788251	85.4	['fastq_index_2/DSMC-KB-0145_cleaned/DSMC-KB-0145_cleaned.2.fq', 'fastq_index_2/DSMC-KB-0145_cleaned/DSMC-KB-0145_cleaned.1.fq']	DSMC-KB-0145_cleaned_raw.cram	4245453	0.95	DSMC-KB-0145_cleaned.tsv.xz	46.55	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	376905	122	0.62	0.366315	150655	0.30074	107470	0.001765	690	0.001338	502	0.028095	12855	0.02096	8540	0.000322	58	5.5e-05	15	0.00053	127	0.000319	90
R80-0_cleaned	R80-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	34902040	31889296	91.37	['fastq_index_4/R80-0_cleaned/R80-0_cleaned.1.fq', 'fastq_index_4/R80-0_cleaned/R80-0_cleaned.2.fq']	R80-0_cleaned_raw.cram	17047998	0.95	R80-0_cleaned.tsv.xz	48.85	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	291583	106	0.69	0.33277	105011	0.293532	84134	0.001229	467	0.001049	371	0.045777	11418	0.03721	8635	0.00027	35	2e-06	4	0.000614	93	0.000422	69
DSMC-KB-0046_cleaned	DSMC-KB-0046_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	16673540	13227616	79.33	['fastq_index_1/DSMC-KB-0046_cleaned/DSMC-KB-0046_cleaned.2.fq', 'fastq_index_1/DSMC-KB-0046_cleaned/DSMC-KB-0046_cleaned.1.fq']	DSMC-KB-0046_cleaned_raw.cram	7222923	0.95	DSMC-KB-0046_cleaned.tsv.xz	43.32	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	897504	395	0.55	0.301531	319007	0.245884	237641	0.002015	1553	0.001522	1294	0.022404	31014	0.018562	23068	0.000335	50	2e-06	5	0.000418	177	0.000146	135
control_BRM776_cleaned	control_BRM776_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-18	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	15153950	13080048	86.31	['output/fastq_index/control_BRM776_cleaned/control_BRM776_cleaned.1.fq', 'output/fastq_index/control_BRM776_cleaned/control_BRM776_cleaned.2.fq']	control_BRM776_cleaned_raw.cram	7175154	0.95	control_BRM776_cleaned.tsv.xz	47.35	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	383443	163	0.61	0.288349	142317	0.242518	94720	0.001737	632	0.001326	444	0.034577	14069	0.026733	9035	0.000699	55	2.5e-05	5	0.000446	108	8.6e-05	67
DSMC-KB-0067_cleaned	DSMC-KB-0067_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-23	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	18191258	16711475	91.87	['output/fastq_index/DSMC-KB-0067_cleaned/DSMC-KB-0067_cleaned.2.fq', 'output/fastq_index/DSMC-KB-0067_cleaned/DSMC-KB-0067_cleaned.1.fq']	DSMC-KB-0067_cleaned_raw.cram	8875924	0.95	DSMC-KB-0067_cleaned.tsv.xz	48.79	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	252664	103	0.6	0.276102	93780	0.238072	72102	0.000953	392	0.000848	300	0.043066	11401	0.033913	8225	0.000144	46	7e-06	7	0.0006	78	0.000438	53
MN-4_cleaned	MN-4_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	26528956	23024947	86.79	['fastq_index/MN-4_cleaned/MN-4_cleaned.2.fq', 'fastq_index/MN-4_cleaned/MN-4_cleaned.1.fq']	MN-4_cleaned_raw.cram	12593840	0.95	MN-4_cleaned.tsv.xz	47.47	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	589230	212	0.57	0.302219	218474	0.23574	155616	0.001562	1041	0.001006	790	0.031472	19668	0.025134	13445	0.000446	64	7e-06	11	0.000531	169	0.000228	121
N0-2_cleaned	N0-2_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	13862	7034	50.74	['fastq_index/N0-2_cleaned/N0-2_cleaned.1.fq', 'fastq_index/N0-2_cleaned/N0-2_cleaned.2.fq']	N0-2_cleaned_raw.cram	3763	0.95	N0-2_cleaned.tsv.xz	27.15	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	4876	3	0.61	0.272197	2077	0.2286	1670	0.001315	12	0.00125	10	0.026182	333	0.021601	243	0.000536	4	0.000246	1	0.000916	6	0.000627	3
S0318_cleaned	S0318_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	39441216	34901234	88.49	['fastq_index_3/S0318_cleaned/S0318_cleaned.1.fq', 'fastq_index_3/S0318_cleaned/S0318_cleaned.2.fq']	S0318_cleaned_raw.cram	18737325	0.95	S0318_cleaned.tsv.xz	47.51	2.0.22	2026-04-07	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	650860	226	0.61	0.271189	233627	0.232426	168674	0.001234	1007	0.001053	761	0.032305	23448	0.025405	16249	0.000235	59	3.6e-05	6	0.000424	165	0.000221	115
G327_cleaned	G327_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-06	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	12985314	7179706	55.29	['fastq_index_2/G327_cleaned/G327_cleaned.1.fq', 'fastq_index_2/G327_cleaned/G327_cleaned.2.fq']	G327_cleaned_raw.cram	3917826	0.95	G327_cleaned.tsv.xz	30.17	2.0.22	2026-04-07	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	256150	79	0.65	0.397774	118388	0.335673	92694	0.002131	536	0.001469	419	0.016141	6538	0.012957	4840	0.000418	76	4.6e-05	22	0.000484	95	0.000255	60
R16-0_cleaned	R16-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	26084404	23123210	88.65	['fastq_index_4/R16-0_cleaned/R16-0_cleaned.1.fq', 'fastq_index_4/R16-0_cleaned/R16-0_cleaned.2.fq']	R16-0_cleaned_raw.cram	12439814	0.95	R16-0_cleaned.tsv.xz	47.69	2.0.22	2026-04-07	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	697311	240	0.61	0.305933	249465	0.256152	180330	0.001658	1098	0.001233	856	0.025561	23028	0.020785	16264	0.00045	69	2.4e-05	14	0.000544	198	0.000219	138
control_D34_cleaned	control_D34_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-18	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	12316860	10673035	86.65	['output/fastq_index/control_D34_cleaned/control_D34_cleaned.1.fq', 'output/fastq_index/control_D34_cleaned/control_D34_cleaned.2.fq']	control_D34_cleaned_raw.cram	5844469	0.95	control_D34_cleaned.tsv.xz	47.45	2.0.22	2026-04-07	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	510137	231	0.68	0.311642	186812	0.276746	137847	0.001478	843	0.001164	669	0.037872	19148	0.032975	13814	0.00034	44	1e-06	9	0.000468	124	0.000266	96
SSV00126_cleaned	SSV00126_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	36851222	33155973	89.97	['fastq_index_3/SSV00126_cleaned/SSV00126_cleaned.2.fq', 'fastq_index_3/SSV00126_cleaned/SSV00126_cleaned.1.fq']	SSV00126_cleaned_raw.cram	17779419	0.95	SSV00126_cleaned.tsv.xz	48.25	2.0.22	2026-04-07	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	579368	177	0.67	0.286894	201118	0.251915	143092	0.001389	856	0.001054	655	0.030829	19512	0.025781	12971	0.000272	44	1.8e-05	4	0.000491	163	0.000255	115
R126-0_cleaned	R126-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	31674118	27455409	86.68	['fastq_index_4/R126-0_cleaned/R126-0_cleaned.2.fq', 'fastq_index_4/R126-0_cleaned/R126-0_cleaned.1.fq']	R126-0_cleaned_raw.cram	14766372	0.95	R126-0_cleaned.tsv.xz	46.62	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	754950	300	0.65	0.32646	272016	0.279508	197325	0.001791	1333	0.001471	1058	0.032767	26939	0.027191	19386	0.000254	56	2.9e-05	10	0.000407	149	0.000178	106
SSV-KB-0044_cleaned	SSV-KB-0044_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	42594206	38419797	90.2	['fastq_index_3/SSV-KB-0044_cleaned/SSV-KB-0044_cleaned.1.fq', 'fastq_index_3/SSV-KB-0044_cleaned/SSV-KB-0044_cleaned.2.fq']	SSV-KB-0044_cleaned_raw.cram	20542362	0.95	SSV-KB-0044_cleaned.tsv.xz	48.23	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	694044	269	0.65	0.303978	247840	0.263167	187129	0.001424	1144	0.001077	916	0.036463	23975	0.029788	17166	0.00032	65	6e-06	9	0.00054	175	0.000321	127
DSMC-KB-0161_cleaned	DSMC-KB-0161_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-04	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	30287762	24962972	82.42	['fastq_index_2/DSMC-KB-0161_cleaned/DSMC-KB-0161_cleaned.2.fq', 'fastq_index_2/DSMC-KB-0161_cleaned/DSMC-KB-0161_cleaned.1.fq']	DSMC-KB-0161_cleaned_raw.cram	10084568	0.95	DSMC-KB-0161_cleaned.tsv.xz	33.3	2.0.22	2026-04-07	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	249963	121	0.72	0.401338	100285	0.356166	80819	0.00172	451	0.001279	358	0.016803	9159	0.014833	6965	0.000707	64	9.1e-05	9	0.000815	96	0.00043	66
S0279_cleaned	S0279_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	35267490	31317367	88.8	['fastq_index_3/S0279_cleaned/S0279_cleaned.1.fq', 'fastq_index_3/S0279_cleaned/S0279_cleaned.2.fq']	S0279_cleaned_raw.cram	16755078	0.95	S0279_cleaned.tsv.xz	47.51	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	587224	193	0.58	0.299761	223698	0.238618	163693	0.00143	1006	0.001069	764	0.027329	20407	0.020532	14420	0.000308	65	3e-06	10	0.000543	185	0.000306	134
SNUH-KB-0058_cleaned	SNUH-KB-0058_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	27594548	23901418	86.62	['fastq_index_3/SNUH-KB-0058_cleaned/SNUH-KB-0058_cleaned.2.fq', 'fastq_index_3/SNUH-KB-0058_cleaned/SNUH-KB-0058_cleaned.1.fq']	SNUH-KB-0058_cleaned_raw.cram	12928537	0.95	SNUH-KB-0058_cleaned.tsv.xz	46.85	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	643390	243	0.62	0.307685	236622	0.258005	163837	0.001743	1055	0.001465	815	0.02998	22151	0.022942	14752	0.000232	38	5.7e-05	5	0.000418	147	0.000201	107
G208_cleaned	G208_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-05	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	20232988	16846201	83.26	['fastq_index_2/G208_cleaned/G208_cleaned.1.fq', 'fastq_index_2/G208_cleaned/G208_cleaned.2.fq']	G208_cleaned_raw.cram	9120162	0.95	G208_cleaned.tsv.xz	45.08	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	387053	127	0.68	0.347299	155767	0.312217	118668	0.00187	706	0.001473	563	0.028269	14368	0.023882	10039	0.000413	74	2.1e-05	18	0.000693	135	0.000228	91
R12-0_cleaned	R12-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-23	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	27531260	24789066	90.04	['fastq_index_4/R12-0_cleaned/R12-0_cleaned.2.fq', 'fastq_index_4/R12-0_cleaned/R12-0_cleaned.1.fq']	R12-0_cleaned_raw.cram	13300404	0.95	R12-0_cleaned.tsv.xz	48.31	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	431008	168	0.62	0.323188	156099	0.275254	116105	0.001645	680	0.001261	521	0.032125	14618	0.027211	10384	0.000217	57	1e-05	4	0.000521	134	0.000376	94
G179_cleaned	G179_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-05	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	16170734	14332099	88.63	['fastq_index_2/G179_cleaned/G179_cleaned.1.fq', 'fastq_index_2/G179_cleaned/G179_cleaned.2.fq']	G179_cleaned_raw.cram	7737937	0.95	G179_cleaned.tsv.xz	47.85	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	534974	177	0.54	0.282925	186074	0.219975	128614	0.001424	796	0.000984	590	0.029829	18300	0.022165	11911	0.000433	55	6e-06	6	0.000549	147	0.000238	104
DSM00305_cleaned	DSM00305_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-22	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	48872184	43324149	88.65	['output/fastq_index/DSM00305_cleaned/DSM00305_cleaned.1.fq', 'output/fastq_index/DSM00305_cleaned/DSM00305_cleaned.2.fq']	DSM00305_cleaned_raw.cram	23024494	0.95	DSM00305_cleaned.tsv.xz	47.11	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	913009	279	0.65	0.289636	314320	0.250854	220291	0.001323	1384	0.001052	1065	0.019738	27638	0.015914	18211	0.000134	62	6e-06	10	0.000405	218	0.00022	153
R134-0_cleaned	R134-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	24492050	20792277	84.89	['fastq_index_4/R134-0_cleaned/R134-0_cleaned.1.fq', 'fastq_index_4/R134-0_cleaned/R134-0_cleaned.2.fq']	R134-0_cleaned_raw.cram	11081863	0.95	R134-0_cleaned.tsv.xz	45.25	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	691723	289	0.69	0.385972	248751	0.336781	179129	0.001763	1147	0.001556	895	0.023198	23998	0.017844	16689	0.000193	60	4e-06	9	0.000536	159	0.000359	109
control_D30_cleaned	control_D30_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-18	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	13106652	11512367	87.84	['output/fastq_index/control_D30_cleaned/control_D30_cleaned.2.fq', 'output/fastq_index/control_D30_cleaned/control_D30_cleaned.1.fq']	control_D30_cleaned_raw.cram	6268529	0.95	control_D30_cleaned.tsv.xz	47.83	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	327010	177	0.6	0.263929	121580	0.22311	87069	0.001633	544	0.001092	413	0.032769	12632	0.024564	8599	0.00067	39	9e-05	5	0.000632	79	0.000249	55
S0045_cleaned	S0045_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	44657146	37702852	84.43	['fastq_index_4/S0045_cleaned/S0045_cleaned.2.fq', 'fastq_index_4/S0045_cleaned/S0045_cleaned.1.fq']	S0045_cleaned_raw.cram	20159169	0.95	S0045_cleaned.tsv.xz	45.14	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	1236398	395	0.6	0.293885	417308	0.246587	302975	0.001727	1986	0.001362	1605	0.025279	38049	0.020961	26532	0.000225	55	6e-06	5	0.000339	227	0.000128	167
igAN_184_cleaned	igAN_184_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	13998396	12212204	87.24	['fastq_index/igAN_184_cleaned/igAN_184_cleaned.2.fq', 'fastq_index/igAN_184_cleaned/igAN_184_cleaned.1.fq']	igAN_184_cleaned_raw.cram	6717549	0.95	igAN_184_cleaned.tsv.xz	47.99	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	312935	112	0.66	0.302433	113833	0.266791	86645	0.00132	484	0.000974	370	0.038156	11022	0.032884	8028	0.000307	36	0.0	2	0.000494	99	0.000302	73
S0071_cleaned	S0071_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	47321090	41655048	88.03	['fastq_index_4/S0071_cleaned/S0071_cleaned.2.fq', 'fastq_index_4/S0071_cleaned/S0071_cleaned.1.fq']	S0071_cleaned_raw.cram	22444084	0.95	S0071_cleaned.tsv.xz	47.43	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	448423	150	0.63	0.286964	162397	0.246276	118629	0.00144	702	0.001233	530	0.034664	18857	0.028012	12860	0.000449	56	3.6e-05	12	0.00051	136	0.000192	93
DSMC-KB-0043_cleaned	DSMC-KB-0043_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-23	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	1316342	1172706	89.09	['output/fastq_index/DSMC-KB-0043_cleaned/DSMC-KB-0043_cleaned.1.fq', 'output/fastq_index/DSMC-KB-0043_cleaned/DSMC-KB-0043_cleaned.2.fq']	DSMC-KB-0043_cleaned_raw.cram	634968	0.95	DSMC-KB-0043_cleaned.tsv.xz	48.24	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	164208	111	0.72	0.369567	67467	0.333995	51891	0.001723	282	0.001414	219	0.029907	8285	0.025355	6008	0.000555	29	2e-06	2	0.000381	52	0.000214	37
R212-0_cleaned	R212-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-13	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	26833430	23638171	88.09	['fastq_index_2/R212-0_cleaned/R212-0_cleaned.2.fq', 'fastq_index_2/R212-0_cleaned/R212-0_cleaned.1.fq']	R212-0_cleaned_raw.cram	12654848	0.95	R212-0_cleaned.tsv.xz	47.16	2.0.22	2026-04-15	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	427775	159	0.64	0.29471	147457	0.25198	111623	0.001431	653	0.001143	504	0.039462	14198	0.034137	10661	0.000175	43	1.2e-05	3	0.000438	102	0.000278	75
DSM00304_cleaned	DSM00304_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-22	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	47715726	43380299	90.91	['output/fastq_index/DSM00304_cleaned/DSM00304_cleaned.1.fq', 'output/fastq_index/DSM00304_cleaned/DSM00304_cleaned.2.fq']	DSM00304_cleaned_raw.cram	22971519	0.95	DSM00304_cleaned.tsv.xz	48.14	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	600265	192	0.63	0.294193	213310	0.246274	152351	0.001076	930	0.000933	706	0.039507	21590	0.030214	15005	0.000108	57	1e-06	7	0.000484	163	0.000316	117
DSMC-KB-0078_cleaned	DSMC-KB-0078_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-23	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	30444948	27263334	89.55	['fastq_index_2/DSMC-KB-0078_cleaned/DSMC-KB-0078_cleaned.2.fq', 'fastq_index_2/DSMC-KB-0078_cleaned/DSMC-KB-0078_cleaned.1.fq']	DSMC-KB-0078_cleaned_raw.cram	14597677	0.95	DSMC-KB-0078_cleaned.tsv.xz	47.95	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	659850	226	0.61	0.312297	226894	0.26178	159635	0.0014	950	0.001124	732	0.034959	22662	0.02929	15667	0.00019	40	0.0	3	0.000396	157	0.000253	118
S0196_cleaned	S0196_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-04	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	53320376	47844280	89.73	['fastq_index_4/S0196_cleaned/S0196_cleaned.1.fq', 'fastq_index_4/S0196_cleaned/S0196_cleaned.2.fq']	S0196_cleaned_raw.cram	25572151	0.95	S0196_cleaned.tsv.xz	47.96	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	660109	220	0.59	0.270467	230541	0.231105	163461	0.001346	990	0.001201	754	0.033085	23861	0.025793	16391	0.000185	51	7.6e-05	4	0.000386	170	0.000241	118
R130-0_cleaned	R130-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	27873574	23953888	85.94	['fastq_index_4/R130-0_cleaned/R130-0_cleaned.1.fq', 'fastq_index_4/R130-0_cleaned/R130-0_cleaned.2.fq']	R130-0_cleaned_raw.cram	12866893	0.95	R130-0_cleaned.tsv.xz	46.16	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	717675	243	0.61	0.298508	251579	0.253142	184192	0.001953	1156	0.001234	920	0.031661	24294	0.026165	17436	0.000289	53	1.4e-05	3	0.000845	180	0.000234	125
R361-0_cleaned	R361-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	29499970	26505505	89.85	['fastq_index_4/R361-0_cleaned/R361-0_cleaned.1.fq', 'fastq_index_4/R361-0_cleaned/R361-0_cleaned.2.fq']	R361-0_cleaned_raw.cram	14261537	0.95	R361-0_cleaned.tsv.xz	48.34	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	553570	174	0.63	0.295915	196939	0.255609	148007	0.00131	898	0.00103	701	0.037979	20025	0.031689	14721	0.000287	50	0.0	4	0.000521	159	0.000308	118
G371_cleaned	G371_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-07	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	12507812	10135498	81.03	['fastq_index_2/G371_cleaned/G371_cleaned.1.fq', 'fastq_index_2/G371_cleaned/G371_cleaned.2.fq']	G371_cleaned_raw.cram	5767605	0.95	G371_cleaned.tsv.xz	46.11	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	358260	134	0.56	0.259472	128552	0.224075	100291	0.001859	562	0.001058	471	0.029386	12711	0.02458	9834	0.000837	45	2e-06	7	0.000477	123	0.000293	81
R141-0_cleaned	R141-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	29666528	25317571	85.34	['fastq_index_4/R141-0_cleaned/R141-0_cleaned.1.fq', 'fastq_index_4/R141-0_cleaned/R141-0_cleaned.2.fq']	R141-0_cleaned_raw.cram	13708935	0.95	R141-0_cleaned.tsv.xz	46.21	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	848866	337	0.61	0.313563	302418	0.263838	218899	0.002173	1517	0.00161	1207	0.023586	28243	0.01976	19999	0.000262	56	6e-06	5	0.00041	205	0.000128	146
G298_cleaned	G298_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-06	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	37866792	33960714	89.68	['fastq_index_2/G298_cleaned/G298_cleaned.2.fq', 'fastq_index_2/G298_cleaned/G298_cleaned.1.fq']	G298_cleaned_raw.cram	18163754	0.95	G298_cleaned.tsv.xz	47.97	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	692175	199	0.58	0.310464	232256	0.253614	160157	0.001478	963	0.001104	734	0.02331	21736	0.017889	14023	0.00024	58	6e-06	7	0.000519	189	0.000259	130
SNUH-KB-0201_cleaned	SNUH-KB-0201_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	36632994	32293451	88.15	['fastq_index_3/SNUH-KB-0201_cleaned/SNUH-KB-0201_cleaned.1.fq', 'fastq_index_3/SNUH-KB-0201_cleaned/SNUH-KB-0201_cleaned.2.fq']	SNUH-KB-0201_cleaned_raw.cram	17356398	0.95	SNUH-KB-0201_cleaned.tsv.xz	47.38	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	834786	263	0.56	0.291777	286121	0.231567	205034	0.00152	1330	0.001049	1024	0.026159	26191	0.020889	18041	0.000285	48	3e-06	5	0.000322	200	0.000164	142
G447_cleaned	G447_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	25597598	22901862	89.47	['fastq_index_4/G447_cleaned/G447_cleaned.1.fq', 'fastq_index_4/G447_cleaned/G447_cleaned.2.fq']	G447_cleaned_raw.cram	12231713	0.95	G447_cleaned.tsv.xz	47.78	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	619309	197	0.6	0.286468	209998	0.239664	147086	0.001315	890	0.000987	671	0.033197	21356	0.02729	14454	0.000302	38	5e-06	5	0.000506	161	0.00024	113
G246_cleaned	G246_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-05	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	32132342	29022694	90.32	['fastq_index_2/G246_cleaned/G246_cleaned.1.fq', 'fastq_index_2/G246_cleaned/G246_cleaned.2.fq']	G246_cleaned_raw.cram	15549172	0.95	G246_cleaned.tsv.xz	48.39	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	538870	182	0.62	0.314185	205559	0.266545	146055	0.001482	906	0.001181	666	0.033156	18421	0.027543	12668	0.000213	58	1.2e-05	7	0.000494	146	0.000366	99
S0051_cleaned	S0051_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	52108664	46926639	90.06	['fastq_index_4/S0051_cleaned/S0051_cleaned.2.fq', 'fastq_index_4/S0051_cleaned/S0051_cleaned.1.fq']	S0051_cleaned_raw.cram	25118426	0.95	S0051_cleaned.tsv.xz	48.2	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	519501	193	0.65	0.274433	187520	0.240899	139639	0.001482	815	0.001186	637	0.036059	18925	0.028498	13532	0.000251	51	6e-05	6	0.000464	134	0.00029	95
KNUH-KB-0063_cleaned	KNUH-KB-0063_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	69055984	61466308	89.01	['fastq_index_4/KNUH-KB-0063_cleaned/KNUH-KB-0063_cleaned.1.fq', 'fastq_index_4/KNUH-KB-0063_cleaned/KNUH-KB-0063_cleaned.2.fq']	KNUH-KB-0063_cleaned_raw.cram	33040901	0.95	KNUH-KB-0063_cleaned.tsv.xz	47.85	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	516657	261	0.81	0.427603	195544	0.403682	151839	0.002077	871	0.001895	709	0.022819	20084	0.02118	14557	0.000482	75	0.000244	18	0.000357	150	0.000258	106
R239-0_cleaned	R239-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-13	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	15734448	14130542	89.81	['fastq_index_2/R239-0_cleaned/R239-0_cleaned.2.fq', 'fastq_index_2/R239-0_cleaned/R239-0_cleaned.1.fq']	R239-0_cleaned_raw.cram	7545453	0.95	R239-0_cleaned.tsv.xz	47.95	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	428311	148	0.62	0.297424	149211	0.254669	105142	0.001761	623	0.001358	469	0.031839	16283	0.026084	11147	0.000375	41	3e-06	4	0.000542	113	0.000302	82
S0238_cleaned	S0238_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-23	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	42324184	37348536	88.24	['fastq_index_3/S0238_cleaned/S0238_cleaned.1.fq', 'fastq_index_3/S0238_cleaned/S0238_cleaned.2.fq']	S0238_cleaned_raw.cram	19924906	0.95	S0238_cleaned.tsv.xz	47.08	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	770401	261	0.6	0.274841	263599	0.237717	194233	0.001412	1171	0.001116	935	0.03242	23782	0.026789	17125	0.000308	57	1e-06	4	0.000362	204	0.000214	138
R152-0_cleaned	R152-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	32642342	29020039	88.9	['fastq_index_4/R152-0_cleaned/R152-0_cleaned.2.fq', 'fastq_index_4/R152-0_cleaned/R152-0_cleaned.1.fq']	R152-0_cleaned_raw.cram	15497839	0.95	R152-0_cleaned.tsv.xz	47.48	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	444923	169	0.63	0.29586	166158	0.260009	127993	0.001489	720	0.001169	555	0.037906	14326	0.032459	10804	0.000448	50	1.6e-05	4	0.000629	116	0.000374	83
G366_cleaned	G366_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-07	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	57330392	51847287	90.44	['fastq_index_2/G366_cleaned/G366_cleaned.1.fq', 'fastq_index_2/G366_cleaned/G366_cleaned.2.fq']	G366_cleaned_raw.cram	27797865	0.95	G366_cleaned.tsv.xz	48.49	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	425139	161	0.6	0.273124	162539	0.239597	120620	0.001237	713	0.000987	556	0.039805	14105	0.034396	9899	0.00027	55	3.4e-05	7	0.000594	120	0.000422	95
R42-0_cleaned	R42-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	39834080	35837889	89.97	['fastq_index_4/R42-0_cleaned/R42-0_cleaned.1.fq', 'fastq_index_4/R42-0_cleaned/R42-0_cleaned.2.fq']	R42-0_cleaned_raw.cram	19362276	0.95	R42-0_cleaned.tsv.xz	48.61	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	564064	178	0.61	0.312323	203076	0.265197	144828	0.001462	864	0.001095	657	0.034296	19449	0.027445	13226	0.000406	45	1.5e-05	6	0.000464	153	0.000267	111
R335-0_cleaned	R335-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	19579736	17093085	87.3	['fastq_index_3/R335-0_cleaned/R335-0_cleaned.1.fq', 'fastq_index_3/R335-0_cleaned/R335-0_cleaned.2.fq']	R335-0_cleaned_raw.cram	9240583	0.95	R335-0_cleaned.tsv.xz	47.19	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	649938	241	0.64	0.340478	233948	0.288602	169666	0.002493	1078	0.0019	853	0.028822	23646	0.024585	16917	0.000323	41	4e-06	4	0.000504	177	0.000213	125
G318_cleaned	G318_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-06	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	25495894	20678868	81.11	['fastq_index_2/G318_cleaned/G318_cleaned.2.fq', 'fastq_index_2/G318_cleaned/G318_cleaned.1.fq']	G318_cleaned_raw.cram	11166359	0.95	G318_cleaned.tsv.xz	43.8	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	1146187	431	0.61	0.324558	415939	0.272408	304796	0.002	2124	0.00153	1747	0.022943	35305	0.01954	24965	0.000163	61	1.8e-05	18	0.000292	237	0.000111	176
DSMC-KB-0040_cleaned	DSMC-KB-0040_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-23	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	15772488	14313794	90.75	['output/fastq_index/DSMC-KB-0040_cleaned/DSMC-KB-0040_cleaned.2.fq', 'output/fastq_index/DSMC-KB-0040_cleaned/DSMC-KB-0040_cleaned.1.fq']	DSMC-KB-0040_cleaned_raw.cram	7691245	0.95	DSMC-KB-0040_cleaned.tsv.xz	48.76	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	203459	80	0.64	0.298706	79402	0.262405	61059	0.001288	341	0.00097	259	0.041189	6241	0.033302	4418	0.000376	34	3.4e-05	4	0.00082	87	0.00045	56
R255-0_cleaned	R255-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	20272332	15993616	78.89	['fastq_index_2/R255-0_cleaned/R255-0_cleaned.2.fq', 'fastq_index_2/R255-0_cleaned/R255-0_cleaned.1.fq']	R255-0_cleaned_raw.cram	8643051	0.95	R255-0_cleaned.tsv.xz	42.63	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	1063053	485	0.6	0.318901	382406	0.263289	285348	0.002035	2005	0.001556	1647	0.027248	34599	0.022427	25057	0.000271	65	1.3e-05	13	0.000375	202	0.000147	145
R209-0_cleaned	R209-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-13	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	23136432	20651588	89.26	['fastq_index_2/R209-0_cleaned/R209-0_cleaned.2.fq', 'fastq_index_2/R209-0_cleaned/R209-0_cleaned.1.fq']	R209-0_cleaned_raw.cram	11052088	0.95	R209-0_cleaned.tsv.xz	47.77	2.0.22	2026-04-15	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	490980	165	0.69	0.304499	175483	0.269071	127721	0.001541	758	0.001227	555	0.037046	16303	0.032522	11760	0.000269	47	2.3e-05	4	0.000514	151	0.000308	103
R108-0_cleaned	R108-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	25119142	21764653	86.65	['fastq_index/R108-0_cleaned/R108-0_cleaned.1.fq', 'fastq_index/R108-0_cleaned/R108-0_cleaned.2.fq']	R108-0_cleaned_raw.cram	11878111	0.95	R108-0_cleaned.tsv.xz	47.29	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	590441	286	0.66	0.350769	204729	0.302249	151406	0.001802	962	0.001624	779	0.015552	20525	0.01325	15044	0.000441	51	0.000249	4	0.000853	144	0.000743	100
KNUH-KB-0012_cleaned	KNUH-KB-0012_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	21416802	19155785	89.44	['fastq_index/KNUH-KB-0012_cleaned/KNUH-KB-0012_cleaned.2.fq', 'fastq_index/KNUH-KB-0012_cleaned/KNUH-KB-0012_cleaned.1.fq']	KNUH-KB-0012_cleaned_raw.cram	10306967	0.95	KNUH-KB-0012_cleaned.tsv.xz	48.13	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	616548	206	0.6	0.306069	216318	0.250898	153364	0.001319	984	0.001011	756	0.034152	20652	0.025978	13577	0.000261	42	2.1e-05	3	0.000517	157	0.000299	112
D65_cleaned	D65_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-20	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	21679236	16768011	77.35	['output/fastq_index/D65_cleaned/D65_cleaned.1.fq', 'output/fastq_index/D65_cleaned/D65_cleaned.2.fq']	D65_cleaned_raw.cram	9016441	0.95	D65_cleaned.tsv.xz	41.59	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	163875	77	0.74	0.330846	63421	0.291888	48761	0.001793	337	0.00149	254	0.049469	6704	0.043862	4888	0.000271	39	7.2e-05	7	0.000525	53	0.000349	29
R352-0_cleaned	R352-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	39893348	34895795	87.47	['fastq_index_4/R352-0_cleaned/R352-0_cleaned.1.fq', 'fastq_index_4/R352-0_cleaned/R352-0_cleaned.2.fq']	R352-0_cleaned_raw.cram	18726626	0.95	R352-0_cleaned.tsv.xz	46.94	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	958776	313	0.6	0.307386	324803	0.252584	232482	0.001804	1567	0.001284	1239	0.029046	29518	0.023832	20935	0.000323	53	5e-06	4	0.000438	186	0.000174	133
R253-0_cleaned	R253-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	29169034	25448592	87.25	['fastq_index_2/R253-0_cleaned/R253-0_cleaned.1.fq', 'fastq_index_2/R253-0_cleaned/R253-0_cleaned.2.fq']	R253-0_cleaned_raw.cram	13798831	0.95	R253-0_cleaned.tsv.xz	47.31	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	302625	118	0.64	0.266801	112854	0.230234	83987	0.001288	490	0.000799	376	0.03079	12103	0.021872	8413	0.000673	36	0.000103	4	0.000732	96	0.000472	71
R336-0_cleaned	R336-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	19246566	16372547	85.07	['fastq_index_3/R336-0_cleaned/R336-0_cleaned.2.fq', 'fastq_index_3/R336-0_cleaned/R336-0_cleaned.1.fq']	R336-0_cleaned_raw.cram	8818617	0.95	R336-0_cleaned.tsv.xz	45.82	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	339475	90	0.63	0.295171	120004	0.255634	94900	0.001605	541	0.000935	440	0.028621	13104	0.023898	9991	0.000689	61	1.1e-05	5	0.000777	109	0.000266	67
DSMC-KB-0102_cleaned	DSMC-KB-0102_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	21117892	17001733	80.51	['fastq_index_2/DSMC-KB-0102_cleaned/DSMC-KB-0102_cleaned.2.fq', 'fastq_index_2/DSMC-KB-0102_cleaned/DSMC-KB-0102_cleaned.1.fq']	DSMC-KB-0102_cleaned_raw.cram	9190624	0.95	DSMC-KB-0102_cleaned.tsv.xz	43.52	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	557325	248	0.68	0.356215	206985	0.311443	154582	0.001489	928	0.001185	724	0.024325	17692	0.021753	12761	0.000535	66	5e-06	11	0.000404	146	0.000157	96
igAN_BRMKID793_cleaned	igAN_BRMKID793_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	11626324	10216607	87.87	['fastq_index/igAN_BRMKID793_cleaned/igAN_BRMKID793_cleaned.1.fq', 'fastq_index/igAN_BRMKID793_cleaned/igAN_BRMKID793_cleaned.2.fq']	igAN_BRMKID793_cleaned_raw.cram	5542217	0.95	igAN_BRMKID793_cleaned.tsv.xz	47.67	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	301112	110	0.68	0.325548	114793	0.282932	89172	0.001288	501	0.001083	406	0.043617	12539	0.035591	9223	0.000298	42	4e-06	6	0.000575	87	0.000365	62
DSM00233_cleaned	DSM00233_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-21	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	73828214	66364675	89.89	['output/fastq_index/DSM00233_cleaned/DSM00233_cleaned.2.fq', 'output/fastq_index/DSM00233_cleaned/DSM00233_cleaned.1.fq']	DSM00233_cleaned_raw.cram	35477942	0.95	DSM00233_cleaned.tsv.xz	48.05	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	666021	291	0.64	0.298309	247136	0.257005	183352	0.001293	1078	0.001078	846	0.037991	24246	0.0305	17038	0.000223	58	2.7e-05	9	0.000453	185	0.000279	129
G475_cleaned	G475_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	38934880	33122357	85.07	['fastq_index/G475_cleaned/G475_cleaned.1.fq', 'fastq_index/G475_cleaned/G475_cleaned.2.fq']	G475_cleaned_raw.cram	17708331	0.95	G475_cleaned.tsv.xz	45.48	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	1018387	423	0.61	0.320836	356707	0.270094	263165	0.001858	1824	0.00149	1494	0.023413	34182	0.01975	24467	0.000189	52	5e-06	6	0.000486	203	0.000221	147
KNUH-KB-0027_cleaned	KNUH-KB-0027_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	80097954	72055550	89.96	['fastq_index/KNUH-KB-0027_cleaned/KNUH-KB-0027_cleaned.2.fq', 'fastq_index/KNUH-KB-0027_cleaned/KNUH-KB-0027_cleaned.1.fq']	KNUH-KB-0027_cleaned_raw.cram	38438111	0.95	KNUH-KB-0027_cleaned.tsv.xz	47.99	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	428723	157	0.6	0.292723	150752	0.242576	114861	0.001069	666	0.000795	519	0.035866	14933	0.029155	10862	0.00029	56	1e-06	5	0.000571	129	0.000339	89
MN_223_cleaned	MN_223_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	14797222	12971695	87.66	['fastq_index/MN_223_cleaned/MN_223_cleaned.1.fq', 'fastq_index/MN_223_cleaned/MN_223_cleaned.2.fq']	MN_223_cleaned_raw.cram	7097853	0.95	MN_223_cleaned.tsv.xz	47.97	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	420100	148	0.6	0.27357	151532	0.231563	104794	0.001377	637	0.001098	487	0.033702	15241	0.026021	10454	0.000403	35	8.8e-05	3	0.000489	119	0.000182	86
BRM00107_cleaned	BRM00107_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-17	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	37106978	32011532	86.27	['output/fastq_index/BRM00107_cleaned/BRM00107_cleaned.1.fq', 'output/fastq_index/BRM00107_cleaned/BRM00107_cleaned.2.fq']	BRM00107_cleaned_raw.cram	17175086	0.95	BRM00107_cleaned.tsv.xz	46.29	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	775562	256	0.57	0.327645	296521	0.25928	209293	0.001515	1381	0.001158	1049	0.027081	25361	0.019978	17624	0.000215	92	3.8e-05	22	0.000484	219	0.000205	152
G337_cleaned	G337_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-06	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	34333830	31035187	90.39	['fastq_index_2/G337_cleaned/G337_cleaned.2.fq', 'fastq_index_2/G337_cleaned/G337_cleaned.1.fq']	G337_cleaned_raw.cram	16607553	0.95	G337_cleaned.tsv.xz	48.37	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	483984	144	0.65	0.298909	167933	0.265768	122622	0.001515	708	0.001282	541	0.03924	15924	0.034516	11526	0.000246	45	0.0	2	0.000522	123	0.000246	86
S0091_cleaned	S0091_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	47036396	42559408	90.48	['fastq_index_3/S0091_cleaned/S0091_cleaned.1.fq', 'fastq_index_3/S0091_cleaned/S0091_cleaned.2.fq']	S0091_cleaned_raw.cram	22705342	0.95	S0091_cleaned.tsv.xz	48.27	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	714814	259	0.62	0.29336	256858	0.250166	191302	0.001326	1109	0.001049	881	0.037595	26180	0.02931	18846	0.000273	66	1.5e-05	12	0.000535	195	0.000292	145
G440_cleaned	G440_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	53217264	46897056	88.12	['fastq_index_4/G440_cleaned/G440_cleaned.2.fq', 'fastq_index_4/G440_cleaned/G440_cleaned.1.fq']	G440_cleaned_raw.cram	25113197	0.95	G440_cleaned.tsv.xz	47.19	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	1065066	337	0.58	0.284552	359453	0.236921	260509	0.001433	1658	0.001116	1314	0.026595	33943	0.021175	23823	0.000251	61	7e-06	4	0.000373	222	0.000211	158
SNUH-KB-0186_cleaned	SNUH-KB-0186_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	37859456	32774007	86.57	['fastq_index_3/SNUH-KB-0186_cleaned/SNUH-KB-0186_cleaned.2.fq', 'fastq_index_3/SNUH-KB-0186_cleaned/SNUH-KB-0186_cleaned.1.fq']	SNUH-KB-0186_cleaned_raw.cram	17685049	0.95	SNUH-KB-0186_cleaned.tsv.xz	46.71	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	837460	254	0.61	0.298522	281054	0.250985	197575	0.001741	1293	0.001237	988	0.026154	24929	0.021353	17006	0.000392	59	1.8e-05	7	0.000439	218	0.000207	150
BRM00083_cleaned	BRM00083_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-16	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	50223164	45284130	90.17	['output/fastq_index/BRM00083_cleaned/BRM00083_cleaned.1.fq', 'output/fastq_index/BRM00083_cleaned/BRM00083_cleaned.2.fq']	BRM00083_cleaned_raw.cram	24245369	0.95	BRM00083_cleaned.tsv.xz	48.28	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	628736	197	0.57	0.265862	220516	0.22226	155552	0.001197	891	0.000898	670	0.030495	19444	0.024292	13073	0.000248	61	0.0	8	0.000517	166	0.000291	115
S0282_cleaned	S0282_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	30801664	27840202	90.39	['fastq_index_3/S0282_cleaned/S0282_cleaned.2.fq', 'fastq_index_3/S0282_cleaned/S0282_cleaned.1.fq']	S0282_cleaned_raw.cram	14885051	0.95	S0282_cleaned.tsv.xz	48.33	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	416387	147	0.64	0.288519	149622	0.251445	113066	0.001298	667	0.000977	523	0.038827	16258	0.031828	11537	0.000391	44	0.0	4	0.000511	110	0.00032	78
MN_189_cleaned	MN_189_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	15740612	13605375	86.43	['fastq_index/MN_189_cleaned/MN_189_cleaned.2.fq', 'fastq_index/MN_189_cleaned/MN_189_cleaned.1.fq']	MN_189_cleaned_raw.cram	7366951	0.95	MN_189_cleaned.tsv.xz	46.8	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	504527	215	0.67	0.319452	208556	0.273788	153313	0.001452	1025	0.00128	809	0.038847	17846	0.028844	12282	0.000267	63	3.6e-05	14	0.000508	141	0.000237	105
D108_cleaned	D108_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-18	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	27703320	25030307	90.35	['output/fastq_index/D108_cleaned/D108_cleaned.2.fq', 'output/fastq_index/D108_cleaned/D108_cleaned.1.fq']	D108_cleaned_raw.cram	13417730	0.95	D108_cleaned.tsv.xz	48.43	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	502623	187	0.67	0.313724	178394	0.277303	132220	0.001423	775	0.001026	622	0.041053	18585	0.034823	13831	0.000402	42	1e-06	3	0.00058	115	0.000329	79
R162-0_cleaned	R162-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	32060172	28512581	88.93	['fastq_index_4/R162-0_cleaned/R162-0_cleaned.2.fq', 'fastq_index_4/R162-0_cleaned/R162-0_cleaned.1.fq']	R162-0_cleaned_raw.cram	15266435	0.95	R162-0_cleaned.tsv.xz	47.62	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	530024	181	0.67	0.321473	193680	0.282509	151554	0.001685	864	0.001274	701	0.039935	19842	0.034505	14857	0.00052	53	0.0001	7	0.000561	128	0.000357	91
R171-0_cleaned	R171-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	32011702	27616626	86.27	['fastq_index_4/R171-0_cleaned/R171-0_cleaned.1.fq', 'fastq_index_4/R171-0_cleaned/R171-0_cleaned.2.fq']	R171-0_cleaned_raw.cram	14944637	0.95	R171-0_cleaned.tsv.xz	46.68	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	914227	385	0.59	0.280155	333226	0.230633	243969	0.001606	1602	0.001319	1279	0.029316	30525	0.022353	21760	0.000324	58	4.9e-05	8	0.000462	207	0.000195	148
DSM00207_cleaned	DSM00207_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-21	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	47521616	41731930	87.82	['output/fastq_index/DSM00207_cleaned/DSM00207_cleaned.2.fq', 'output/fastq_index/DSM00207_cleaned/DSM00207_cleaned.1.fq']	DSM00207_cleaned_raw.cram	22417611	0.95	DSM00207_cleaned.tsv.xz	47.17	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	755001	266	0.64	0.339185	274259	0.288266	202221	0.001473	1184	0.001123	906	0.032208	26375	0.026459	18758	0.00031	79	6.2e-05	11	0.000673	210	0.000417	152
DSM00221_cleaned	DSM00221_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-21	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	72846474	62624485	85.97	['output/fastq_index/DSM00221_cleaned/DSM00221_cleaned.1.fq', 'output/fastq_index/DSM00221_cleaned/DSM00221_cleaned.2.fq']	DSM00221_cleaned_raw.cram	33750253	0.95	DSM00221_cleaned.tsv.xz	46.33	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	1011957	349	0.6	0.294541	362638	0.244321	257521	0.001723	1643	0.001375	1297	0.031687	33216	0.023995	22614	0.00041	72	7.9e-05	11	0.000428	230	0.000184	161
KNUH-KB-0059_cleaned	KNUH-KB-0059_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	60074340	53829270	89.6	['fastq_index/KNUH-KB-0059_cleaned/KNUH-KB-0059_cleaned.2.fq', 'fastq_index/KNUH-KB-0059_cleaned/KNUH-KB-0059_cleaned.1.fq']	KNUH-KB-0059_cleaned_raw.cram	28797907	0.95	KNUH-KB-0059_cleaned.tsv.xz	47.94	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	585533	255	0.54	0.257043	214804	0.216304	163226	0.001142	890	0.000917	723	0.036927	21421	0.029595	15478	0.000175	55	1.2e-05	5	0.000556	184	0.000299	124
G248_cleaned	G248_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-05	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	31635010	28754923	90.9	['fastq_index_2/G248_cleaned/G248_cleaned.2.fq', 'fastq_index_2/G248_cleaned/G248_cleaned.1.fq']	G248_cleaned_raw.cram	15425002	0.95	G248_cleaned.tsv.xz	48.76	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	368694	132	0.64	0.308139	134404	0.267513	97390	0.001889	562	0.001472	434	0.041906	11191	0.035601	7802	0.000418	39	4.5e-05	3	0.000389	111	0.000245	79
S0328_cleaned	S0328_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	46923436	42742063	91.09	['fastq_index_3/S0328_cleaned/S0328_cleaned.2.fq', 'fastq_index_3/S0328_cleaned/S0328_cleaned.1.fq']	S0328_cleaned_raw.cram	22713845	0.95	S0328_cleaned.tsv.xz	48.41	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	443645	139	0.67	0.2896	151836	0.255807	110211	0.001349	630	0.00097	471	0.039468	16150	0.032835	11111	0.000362	48	2e-06	6	0.000557	108	0.00037	77
G481_cleaned	G481_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	41016036	36800689	89.72	['fastq_index/G481_cleaned/G481_cleaned.1.fq', 'fastq_index/G481_cleaned/G481_cleaned.2.fq']	G481_cleaned_raw.cram	19571665	0.95	G481_cleaned.tsv.xz	47.72	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	643438	218	0.61	0.279513	226012	0.239267	170806	0.001325	980	0.000984	795	0.030286	21652	0.025309	16114	0.000316	60	2e-06	6	0.000623	152	0.000262	110
BRMH-KB-0058_cleaned	BRMH-KB-0058_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-17	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	19203754	17336392	90.28	['output/fastq_index/BRMH-KB-0058_cleaned/BRMH-KB-0058_cleaned.2.fq', 'output/fastq_index/BRMH-KB-0058_cleaned/BRMH-KB-0058_cleaned.1.fq']	BRMH-KB-0058_cleaned_raw.cram	9248119	0.95	BRMH-KB-0058_cleaned.tsv.xz	48.16	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	400928	170	0.58	0.269678	143245	0.227803	105620	0.001131	608	0.000864	488	0.037286	16037	0.029244	10680	0.000266	38	3e-06	5	0.000485	119	0.000283	85
G016_cleaned	G016_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-05	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	12814868	11382777	88.82	['fastq_index_2/G016_cleaned/G016_cleaned.2.fq', 'fastq_index_2/G016_cleaned/G016_cleaned.1.fq']	G016_cleaned_raw.cram	6149979	0.95	G016_cleaned.tsv.xz	47.99	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	267074	87	0.73	0.392945	104458	0.360461	76587	0.001093	454	0.000948	349	0.015767	10127	0.012737	7196	0.000128	47	7e-06	6	0.000405	101	0.000316	65
DSM00269_cleaned	DSM00269_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	12473246	10960807	87.87	['fastq_index_1/DSM00269_cleaned/DSM00269_cleaned.1.fq', 'fastq_index_1/DSM00269_cleaned/DSM00269_cleaned.2.fq']	DSM00269_cleaned_raw.cram	5947627	0.95	DSM00269_cleaned.tsv.xz	47.68	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	414272	155	0.7	0.310257	154540	0.272755	117102	0.001998	696	0.001421	546	0.0343	14886	0.029688	11028	0.000234	44	6e-06	3	0.00051	107	0.000316	77
DSMC-KB-0147_cleaned	DSMC-KB-0147_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-04	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	4450930	3881108	87.2	['fastq_index_2/DSMC-KB-0147_cleaned/DSMC-KB-0147_cleaned.1.fq', 'fastq_index_2/DSMC-KB-0147_cleaned/DSMC-KB-0147_cleaned.2.fq']	DSMC-KB-0147_cleaned_raw.cram	2105926	0.95	DSMC-KB-0147_cleaned.tsv.xz	47.31	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	263651	117	0.58	0.286112	105197	0.240448	77038	0.001462	467	0.001121	354	0.029868	10007	0.023112	6763	0.000378	55	5.8e-05	12	0.000348	87	0.000222	60
G299_cleaned	G299_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-06	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	38442030	34708670	90.29	['fastq_index_2/G299_cleaned/G299_cleaned.1.fq', 'fastq_index_2/G299_cleaned/G299_cleaned.2.fq']	G299_cleaned_raw.cram	18390447	0.95	G299_cleaned.tsv.xz	47.84	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	435712	147	0.61	0.264737	154092	0.228592	120498	0.001467	678	0.001076	543	0.034487	16379	0.028529	12139	0.000245	71	1e-06	11	0.000581	130	0.000271	86
R32-0_cleaned	R32-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	24512420	21934218	89.48	['fastq_index_4/R32-0_cleaned/R32-0_cleaned.2.fq', 'fastq_index_4/R32-0_cleaned/R32-0_cleaned.1.fq']	R32-0_cleaned_raw.cram	11798936	0.95	R32-0_cleaned.tsv.xz	48.13	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	517644	174	0.63	0.305895	189986	0.263225	144592	0.001493	800	0.001139	640	0.03261	19334	0.026939	14302	0.00038	58	4.3e-05	9	0.000571	163	0.000306	120
G324_cleaned	G324_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-06	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	14125848	12808941	90.68	['fastq_index_2/G324_cleaned/G324_cleaned.2.fq', 'fastq_index_2/G324_cleaned/G324_cleaned.1.fq']	G324_cleaned_raw.cram	6878832	0.95	G324_cleaned.tsv.xz	48.7	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	276959	84	0.71	0.307617	106372	0.273563	76657	0.001664	452	0.001338	332	0.04437	9523	0.037971	6621	0.000272	43	4.2e-05	5	0.000537	95	0.00028	68
S0329_cleaned	S0329_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	36049238	32072400	88.97	['fastq_index_3/S0329_cleaned/S0329_cleaned.2.fq', 'fastq_index_3/S0329_cleaned/S0329_cleaned.1.fq']	S0329_cleaned_raw.cram	17226516	0.95	S0329_cleaned.tsv.xz	47.79	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	520251	170	0.66	0.285315	189765	0.247809	143720	0.001914	897	0.001534	707	0.034219	18726	0.028795	13760	0.000356	63	5e-06	13	0.000321	158	0.000137	109
R310-0_cleaned	R310-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	23975252	21099256	88.0	['fastq_index_3/R310-0_cleaned/R310-0_cleaned.1.fq', 'fastq_index_3/R310-0_cleaned/R310-0_cleaned.2.fq']	R310-0_cleaned_raw.cram	11301454	0.95	R310-0_cleaned.tsv.xz	47.14	2.0.22	2026-04-15	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	773686	284	0.61	0.316363	289364	0.265168	209851	0.001682	1349	0.001269	1065	0.030961	27209	0.024829	19016	0.000311	64	1.4e-05	10	0.000542	189	0.000278	129
R83-0_cleaned	R83-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	51201444	45009080	87.91	['fastq_index_4/R83-0_cleaned/R83-0_cleaned.2.fq', 'fastq_index_4/R83-0_cleaned/R83-0_cleaned.1.fq']	R83-0_cleaned_raw.cram	24405681	0.95	R83-0_cleaned.tsv.xz	47.67	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	844538	280	0.67	0.313915	295340	0.272704	214519	0.001759	1283	0.001422	1006	0.030794	26980	0.026978	19406	0.000242	59	8e-06	6	0.000588	210	0.000295	147
S0265_cleaned	S0265_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	37872766	34059637	89.93	['fastq_index_3/S0265_cleaned/S0265_cleaned.1.fq', 'fastq_index_3/S0265_cleaned/S0265_cleaned.2.fq']	S0265_cleaned_raw.cram	18292226	0.95	S0265_cleaned.tsv.xz	48.3	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	470632	153	0.6	0.269207	161275	0.230457	121124	0.001198	665	0.000955	528	0.035856	15306	0.028176	11011	0.000251	39	1e-06	4	0.000474	129	0.000238	88
DSMC-KB-0029_cleaned	DSMC-KB-0029_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-22	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	1022310	907618	88.78	['output/fastq_index/DSMC-KB-0029_cleaned/DSMC-KB-0029_cleaned.1.fq', 'output/fastq_index/DSMC-KB-0029_cleaned/DSMC-KB-0029_cleaned.2.fq']	DSMC-KB-0029_cleaned_raw.cram	494191	0.95	DSMC-KB-0029_cleaned.tsv.xz	48.34	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	123610	50	0.59	0.268821	45859	0.228704	36752	0.001284	211	0.000948	163	0.039575	6434	0.032215	4951	0.000223	24	3e-06	2	0.000556	41	0.000296	30
G326_cleaned	G326_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-06	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	36779800	32979085	89.67	['fastq_index_2/G326_cleaned/G326_cleaned.1.fq', 'fastq_index_2/G326_cleaned/G326_cleaned.2.fq']	G326_cleaned_raw.cram	17592090	0.95	G326_cleaned.tsv.xz	47.83	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	534138	190	0.62	0.272082	190955	0.229475	143914	0.001265	811	0.000886	640	0.0349	19834	0.027481	14284	0.000249	44	5e-06	5	0.000692	151	0.000279	121
DSMC-KB-0178_cleaned	DSMC-KB-0178_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-04	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	56835052	49782806	87.59	['fastq_index_2/DSMC-KB-0178_cleaned/DSMC-KB-0178_cleaned.1.fq', 'fastq_index_2/DSMC-KB-0178_cleaned/DSMC-KB-0178_cleaned.2.fq']	DSMC-KB-0178_cleaned_raw.cram	26829953	0.95	DSMC-KB-0178_cleaned.tsv.xz	47.21	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	801621	236	0.57	0.272999	276478	0.225052	200008	0.001454	1214	0.00106	949	0.025702	27416	0.019995	19247	0.000287	46	2.6e-05	6	0.00041	196	0.00018	132
KNUH-KB-0011_cleaned	KNUH-KB-0011_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	23808796	21408390	89.92	['fastq_index/KNUH-KB-0011_cleaned/KNUH-KB-0011_cleaned.2.fq', 'fastq_index/KNUH-KB-0011_cleaned/KNUH-KB-0011_cleaned.1.fq']	KNUH-KB-0011_cleaned_raw.cram	11514772	0.95	KNUH-KB-0011_cleaned.tsv.xz	48.36	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	508281	164	0.61	0.285489	185477	0.240391	134458	0.001364	790	0.001016	597	0.037764	18350	0.030959	12762	0.000248	37	0.0	7	0.000547	135	0.000306	99
control_1017_cleaned	control_1017_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-17	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	10074776	8937481	88.71	['output/fastq_index/control_1017_cleaned/control_1017_cleaned.1.fq', 'output/fastq_index/control_1017_cleaned/control_1017_cleaned.2.fq']	control_1017_cleaned_raw.cram	4867763	0.95	control_1017_cleaned.tsv.xz	48.32	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	453448	160	0.6	0.296118	157872	0.244995	115478	0.001463	697	0.001047	536	0.034368	16555	0.026869	11797	0.00023	31	0.0	2	0.000718	120	0.000315	88
G402_cleaned	G402_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-23	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	26668752	23394642	87.72	['fastq_index/G402_cleaned/G402_cleaned.2.fq', 'fastq_index/G402_cleaned/G402_cleaned.1.fq']	G402_cleaned_raw.cram	12629933	0.95	G402_cleaned.tsv.xz	47.36	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	527546	176	0.71	0.337885	193653	0.302009	144156	0.001365	819	0.00117	645	0.032688	16777	0.027389	11765	0.000179	52	1e-06	7	0.0004	149	0.000293	108
R314-0_cleaned	R314-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	25799900	22822469	88.46	['fastq_index_3/R314-0_cleaned/R314-0_cleaned.1.fq', 'fastq_index_3/R314-0_cleaned/R314-0_cleaned.2.fq']	R314-0_cleaned_raw.cram	12146524	0.95	R314-0_cleaned.tsv.xz	47.08	2.0.22	2026-04-15	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	360668	125	0.61	0.294856	129808	0.25162	101888	0.00149	580	0.000968	463	0.040181	12848	0.032275	9906	0.000758	51	7e-06	4	0.000589	105	0.000316	69
G404_cleaned	G404_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	24104630	21623432	89.71	['fastq_index_4/G404_cleaned/G404_cleaned.2.fq', 'fastq_index_4/G404_cleaned/G404_cleaned.1.fq']	G404_cleaned_raw.cram	11512018	0.95	G404_cleaned.tsv.xz	47.76	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	380621	163	0.63	0.319474	140426	0.282684	106838	0.001277	592	0.001092	472	0.028984	13691	0.024317	9860	0.00023	50	6e-06	5	0.000419	103	0.000281	73
S0316_cleaned	S0316_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	28935090	25329653	87.54	['fastq_index_3/S0316_cleaned/S0316_cleaned.1.fq', 'fastq_index_3/S0316_cleaned/S0316_cleaned.2.fq']	S0316_cleaned_raw.cram	13549179	0.95	S0316_cleaned.tsv.xz	46.83	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	316037	135	0.69	0.35727	124981	0.292342	93523	0.000996	589	0.000805	447	0.045665	11228	0.028799	8165	3.4e-05	57	2e-06	9	0.000366	100	0.000337	63
G338_cleaned	G338_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-06	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	39163508	35361241	90.29	['fastq_index_2/G338_cleaned/G338_cleaned.1.fq', 'fastq_index_2/G338_cleaned/G338_cleaned.2.fq']	G338_cleaned_raw.cram	18824370	0.95	G338_cleaned.tsv.xz	48.07	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	448506	171	0.56	0.271167	160425	0.221932	119063	0.001131	664	0.000807	539	0.034791	16609	0.026809	11769	0.000314	50	1.4e-05	7	0.000506	113	0.000272	89
BRM00092_cleaned	BRM00092_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-13	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	20865646	18231436	87.38	['fastq_index_1/BRM00092_cleaned/BRM00092_cleaned.2.fq', 'fastq_index_1/BRM00092_cleaned/BRM00092_cleaned.1.fq']	BRM00092_cleaned_raw.cram	9800391	0.95	BRM00092_cleaned.tsv.xz	46.97	2.0.22	2026-04-15	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	739579	263	0.59	0.274038	254661	0.233892	187721	0.001398	1119	0.001064	895	0.022746	25521	0.018942	18371	0.000267	51	1.2e-05	5	0.000405	180	0.000178	129
DSMC-KB-0166_cleaned	DSMC-KB-0166_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-04	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	45449386	40526576	89.17	['fastq_index_2/DSMC-KB-0166_cleaned/DSMC-KB-0166_cleaned.1.fq', 'fastq_index_2/DSMC-KB-0166_cleaned/DSMC-KB-0166_cleaned.2.fq']	DSMC-KB-0166_cleaned_raw.cram	21562524	0.95	DSMC-KB-0166_cleaned.tsv.xz	47.44	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	787178	226	0.61	0.293647	260663	0.24444	182933	0.001581	1146	0.001176	869	0.023775	23948	0.019947	16643	0.000176	55	1e-06	8	0.000365	207	0.000201	147
R172-0_cleaned	R172-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	25547108	23041253	90.19	['fastq_index_4/R172-0_cleaned/R172-0_cleaned.1.fq', 'fastq_index_4/R172-0_cleaned/R172-0_cleaned.2.fq']	R172-0_cleaned_raw.cram	12311808	0.95	R172-0_cleaned.tsv.xz	48.19	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	522630	197	0.65	0.314784	190122	0.269777	140636	0.001342	824	0.001144	642	0.037503	18099	0.029645	13056	0.000175	41	1e-06	5	0.000576	148	0.000349	106
BRMH-KB-0055_cleaned	BRMH-KB-0055_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-13	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	24294474	21435538	88.23	['fastq_index_1/BRMH-KB-0055_cleaned/BRMH-KB-0055_cleaned.2.fq', 'fastq_index_1/BRMH-KB-0055_cleaned/BRMH-KB-0055_cleaned.1.fq']	BRMH-KB-0055_cleaned_raw.cram	11461077	0.95	BRMH-KB-0055_cleaned.tsv.xz	47.18	2.0.22	2026-04-15	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	236920	124	0.76	0.343488	99179	0.319509	80055	0.001223	432	0.0011	356	0.050264	9626	0.049102	7252	0.000125	57	2.3e-05	14	0.000513	75	0.00042	51
KNUH-KB-0024_cleaned	KNUH-KB-0024_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	71550896	53275091	74.46	['fastq_index_4/KNUH-KB-0024_cleaned/KNUH-KB-0024_cleaned.2.fq', 'fastq_index_4/KNUH-KB-0024_cleaned/KNUH-KB-0024_cleaned.1.fq']	KNUH-KB-0024_cleaned_raw.cram	28340586	0.95	KNUH-KB-0024_cleaned.tsv.xz	39.61	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	917612	315	0.27	0.219524	319691	0.112853	227469	0.000689	1408	0.000502	1099	0.013338	29950	0.011015	20593	0.000137	71	2e-06	11	0.000243	225	0.00011	157
igAN_BRMKID765_cleaned	igAN_BRMKID765_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	16577778	14694117	88.64	['fastq_index/igAN_BRMKID765_cleaned/igAN_BRMKID765_cleaned.2.fq', 'fastq_index/igAN_BRMKID765_cleaned/igAN_BRMKID765_cleaned.1.fq']	igAN_BRMKID765_cleaned_raw.cram	7979921	0.95	igAN_BRMKID765_cleaned.tsv.xz	48.14	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	364398	122	0.63	0.303533	144676	0.262476	113503	0.001636	654	0.001	546	0.037222	13408	0.031008	10211	0.00048	55	1e-06	8	0.000617	118	0.000267	90
G331_cleaned	G331_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-06	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	37231016	33084774	88.86	['fastq_index_2/G331_cleaned/G331_cleaned.1.fq', 'fastq_index_2/G331_cleaned/G331_cleaned.2.fq']	G331_cleaned_raw.cram	17607494	0.95	G331_cleaned.tsv.xz	47.29	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	535799	195	0.62	0.293679	199423	0.248898	146607	0.001432	853	0.001113	662	0.037573	19085	0.028693	13437	0.000275	64	2e-06	12	0.0005	151	0.000268	106
SSV-KB-0045_cleaned	SSV-KB-0045_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	40885684	35841188	87.66	['fastq_index_3/SSV-KB-0045_cleaned/SSV-KB-0045_cleaned.1.fq', 'fastq_index_3/SSV-KB-0045_cleaned/SSV-KB-0045_cleaned.2.fq']	SSV-KB-0045_cleaned_raw.cram	19185819	0.95	SSV-KB-0045_cleaned.tsv.xz	46.93	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	580613	257	0.63	0.303743	214953	0.255611	162277	0.001213	925	0.001027	742	0.037984	21607	0.0301	15244	0.000109	60	2e-06	8	0.0004	151	0.000294	99
S0270_cleaned	S0270_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	36523352	32331204	88.52	['fastq_index_3/S0270_cleaned/S0270_cleaned.1.fq', 'fastq_index_3/S0270_cleaned/S0270_cleaned.2.fq']	S0270_cleaned_raw.cram	17282461	0.95	S0270_cleaned.tsv.xz	47.32	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	682976	197	0.58	0.297644	230728	0.244813	161247	0.001765	974	0.001257	717	0.026774	21935	0.021194	14573	0.000391	59	1.3e-05	5	0.000641	179	0.000281	122
S0246_cleaned	S0246_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-16	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	37273740	32734270	87.82	['last3fastq/S0246_cleaned/S0246_cleaned.2.fq', 'last3fastq/S0246_cleaned/S0246_cleaned.1.fq']	S0246_cleaned_raw.cram	17599167	0.95	S0246_cleaned.tsv.xz	47.22	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	575989	203	0.52	0.226773	200544	0.186738	141091	0.001484	820	0.000865	619	0.026401	21507	0.019493	15000	0.000535	47	6.4e-05	6	0.000353	152	0.00021	110
G258_cleaned	G258_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-05	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	18482264	15681629	84.85	['fastq_index_2/G258_cleaned/G258_cleaned.1.fq', 'fastq_index_2/G258_cleaned/G258_cleaned.2.fq']	G258_cleaned_raw.cram	8443016	0.95	G258_cleaned.tsv.xz	45.68	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	793264	373	0.59	0.29413	290562	0.239307	214356	0.001532	1450	0.001132	1173	0.0274	27728	0.020391	19745	0.000271	53	1.8e-05	5	0.000446	171	0.00019	132
G480_cleaned	G480_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	30971514	27563441	89.0	['fastq_index/G480_cleaned/G480_cleaned.1.fq', 'fastq_index/G480_cleaned/G480_cleaned.2.fq']	G480_cleaned_raw.cram	14681533	0.95	G480_cleaned.tsv.xz	47.4	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	498548	187	0.64	0.319228	187669	0.276633	138749	0.001781	806	0.001392	634	0.029734	17595	0.024995	12212	0.000401	56	4e-06	8	0.000391	147	0.000191	100
G472_cleaned	G472_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	41215354	37049531	89.89	['fastq_index/G472_cleaned/G472_cleaned.2.fq', 'fastq_index/G472_cleaned/G472_cleaned.1.fq']	G472_cleaned_raw.cram	19677196	0.95	G472_cleaned.tsv.xz	47.74	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	594000	228	0.66	0.296677	216225	0.258125	158099	0.001414	934	0.000979	735	0.037788	21592	0.032232	15613	0.000446	63	2.1e-05	9	0.000604	160	0.000295	118
SSV-KB-0086_cleaned	SSV-KB-0086_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	39014900	34928376	89.53	['fastq_index_3/SSV-KB-0086_cleaned/SSV-KB-0086_cleaned.2.fq', 'fastq_index_3/SSV-KB-0086_cleaned/SSV-KB-0086_cleaned.1.fq']	SSV-KB-0086_cleaned_raw.cram	18727280	0.95	SSV-KB-0086_cleaned.tsv.xz	48.0	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	966549	385	0.6	0.282139	336666	0.23832	247237	0.001558	1548	0.001127	1223	0.032643	34399	0.027034	24379	0.000278	67	1.8e-05	10	0.0005	226	0.000243	165
SSV00166_cleaned	SSV00166_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	42377584	35613334	84.04	['fastq_index_3/SSV00166_cleaned/SSV00166_cleaned.1.fq', 'fastq_index_3/SSV00166_cleaned/SSV00166_cleaned.2.fq']	SSV00166_cleaned_raw.cram	14374319	0.95	SSV00166_cleaned.tsv.xz	33.92	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	1162339	410	0.55	0.295445	410327	0.235717	296048	0.001512	1893	0.001131	1510	0.022336	38114	0.01715	25930	0.000158	84	8e-06	17	0.000316	271	0.000195	193
control_1011_cleaned	control_1011_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-17	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	18958412	16671177	87.94	['output/fastq_index/control_1011_cleaned/control_1011_cleaned.2.fq', 'output/fastq_index/control_1011_cleaned/control_1011_cleaned.1.fq']	control_1011_cleaned_raw.cram	9109708	0.95	control_1011_cleaned.tsv.xz	48.05	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	464531	164	0.63	0.280971	167348	0.241379	122149	0.001293	715	0.0011	557	0.032107	17166	0.02531	12021	0.000215	33	6.2e-05	1	0.000453	126	0.000261	97
BRM00114_cleaned	BRM00114_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-17	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	18229560	15753245	86.42	['output/fastq_index/BRM00114_cleaned/BRM00114_cleaned.2.fq', 'output/fastq_index/BRM00114_cleaned/BRM00114_cleaned.1.fq']	BRM00114_cleaned_raw.cram	8518369	0.95	BRM00114_cleaned.tsv.xz	46.73	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	389196	150	0.34	0.175818	139885	0.133576	105399	0.000701	560	0.000582	447	0.018334	13970	0.014975	9939	0.000121	45	1.1e-05	5	0.000265	109	0.000177	77
DSM00303_cleaned	DSM00303_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-22	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	41836926	37102960	88.68	['output/fastq_index/DSM00303_cleaned/DSM00303_cleaned.2.fq', 'output/fastq_index/DSM00303_cleaned/DSM00303_cleaned.1.fq']	DSM00303_cleaned_raw.cram	19657679	0.95	DSM00303_cleaned.tsv.xz	46.99	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	744603	243	0.54	0.277642	256645	0.223537	179581	0.001458	1074	0.001055	846	0.02451	22491	0.018548	15072	0.000215	46	1.6e-05	8	0.0004	181	0.000225	128
G255_cleaned	G255_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	32862086	29391909	89.44	['fastq_index_4/G255_cleaned/G255_cleaned.1.fq', 'fastq_index_4/G255_cleaned/G255_cleaned.2.fq']	G255_cleaned_raw.cram	15772383	0.95	G255_cleaned.tsv.xz	48.0	2.0.22	2026-04-15	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	574111	195	0.6	0.287446	202787	0.243333	148469	0.001478	895	0.001111	673	0.032122	19407	0.026768	13808	0.000357	48	0.0	2	0.000502	158	0.0003	112
DSMC-KB-0016_cleaned	DSMC-KB-0016_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-22	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	25269344	22410138	88.69	['output/fastq_index/DSMC-KB-0016_cleaned/DSMC-KB-0016_cleaned.2.fq', 'output/fastq_index/DSMC-KB-0016_cleaned/DSMC-KB-0016_cleaned.1.fq']	DSMC-KB-0016_cleaned_raw.cram	12007353	0.95	DSMC-KB-0016_cleaned.tsv.xz	47.52	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	961699	326	0.6	0.318376	342320	0.265457	248894	0.001613	1596	0.001296	1280	0.02816	32263	0.022875	22926	0.000203	54	7e-06	9	0.000435	216	0.000224	154
DSMC-KB-0003_cleaned	DSMC-KB-0003_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-22	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	5360698	4487186	83.71	['output/fastq_index/DSMC-KB-0003_cleaned/DSMC-KB-0003_cleaned.2.fq', 'output/fastq_index/DSMC-KB-0003_cleaned/DSMC-KB-0003_cleaned.1.fq']	DSMC-KB-0003_cleaned_raw.cram	2462470	0.95	DSMC-KB-0003_cleaned.tsv.xz	45.94	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	572903	264	0.58	0.321784	213809	0.250152	153010	0.001622	1001	0.001251	778	0.024614	20706	0.018488	14103	0.000273	47	1.7e-05	6	0.000397	130	0.000192	94
G339_cleaned	G339_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-06	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	36211710	32693156	90.28	['fastq_index_2/G339_cleaned/G339_cleaned.2.fq', 'fastq_index_2/G339_cleaned/G339_cleaned.1.fq']	G339_cleaned_raw.cram	17309504	0.95	G339_cleaned.tsv.xz	47.8	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	651477	238	0.64	0.289184	235303	0.247686	169701	0.001401	1043	0.001107	801	0.03502	21448	0.028471	14794	0.000234	67	1.6e-05	14	0.000461	184	0.000292	129
R68-0_cleaned	R68-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	26595580	21329197	80.2	['fastq_index_4/R68-0_cleaned/R68-0_cleaned.2.fq', 'fastq_index_4/R68-0_cleaned/R68-0_cleaned.1.fq']	R68-0_cleaned_raw.cram	11623651	0.95	R68-0_cleaned.tsv.xz	43.71	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	399087	150	0.66	0.367248	151874	0.312836	112404	0.002138	705	0.001469	530	0.01858	11477	0.016416	8490	0.000606	60	3e-06	7	0.000504	113	0.00027	73
R110-0_cleaned	R110-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	24859344	22256643	89.53	['fastq_index/R110-0_cleaned/R110-0_cleaned.1.fq', 'fastq_index/R110-0_cleaned/R110-0_cleaned.2.fq']	R110-0_cleaned_raw.cram	11972457	0.95	R110-0_cleaned.tsv.xz	48.16	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	481281	162	0.64	0.282695	161946	0.243958	121644	0.001101	739	0.000865	567	0.041854	17849	0.035734	13228	0.00022	44	0.0	4	0.000511	135	0.000315	95
R2-0_cleaned	R2-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	33193514	29019533	87.43	['fastq_index_4/R2-0_cleaned/R2-0_cleaned.1.fq', 'fastq_index_4/R2-0_cleaned/R2-0_cleaned.2.fq']	R2-0_cleaned_raw.cram	15616817	0.95	R2-0_cleaned.tsv.xz	47.05	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	598986	224	0.66	0.301587	205344	0.263614	154942	0.001423	967	0.001107	770	0.033611	19460	0.029182	14679	0.000426	57	1e-06	10	0.00049	141	0.000261	95
SSV-KB-0072_cleaned	SSV-KB-0072_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	47439144	41714560	87.93	['fastq_index_3/SSV-KB-0072_cleaned/SSV-KB-0072_cleaned.2.fq', 'fastq_index_3/SSV-KB-0072_cleaned/SSV-KB-0072_cleaned.1.fq']	SSV-KB-0072_cleaned_raw.cram	22400262	0.95	SSV-KB-0072_cleaned.tsv.xz	47.22	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	973994	329	0.59	0.272908	334641	0.230195	240229	0.001591	1452	0.00125	1147	0.029168	34376	0.02311	23873	0.000247	55	2.2e-05	5	0.000377	230	0.00017	168
R34-0_cleaned	R34-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	33171138	28504817	85.93	['fastq_index_4/R34-0_cleaned/R34-0_cleaned.2.fq', 'fastq_index_4/R34-0_cleaned/R34-0_cleaned.1.fq']	R34-0_cleaned_raw.cram	15560148	0.95	R34-0_cleaned.tsv.xz	46.91	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	877288	299	0.59	0.299966	305099	0.247578	220628	0.001813	1426	0.001471	1129	0.029091	28604	0.022473	20012	0.000349	65	4.8e-05	14	0.000401	185	0.000198	134
G303_cleaned	G303_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-06	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	41409092	37526799	90.62	['fastq_index_2/G303_cleaned/G303_cleaned.1.fq', 'fastq_index_2/G303_cleaned/G303_cleaned.2.fq']	G303_cleaned_raw.cram	19834879	0.95	G303_cleaned.tsv.xz	47.9	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	263585	119	0.74	0.278177	100663	0.252814	78311	0.001534	429	0.001063	338	0.04098	10249	0.037561	7715	0.000729	42	4.1e-05	9	0.000751	77	0.000344	52
CAUMC-KB-0011_cleaned	CAUMC-KB-0011_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-17	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	35636260	31507860	88.42	['output/fastq_index/CAUMC-KB-0011_cleaned/CAUMC-KB-0011_cleaned.1.fq', 'output/fastq_index/CAUMC-KB-0011_cleaned/CAUMC-KB-0011_cleaned.2.fq']	CAUMC-KB-0011_cleaned_raw.cram	16955483	0.95	CAUMC-KB-0011_cleaned.tsv.xz	47.58	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	540624	217	0.63	0.305808	196229	0.258681	146363	0.001662	844	0.00108	660	0.028179	17260	0.022555	12275	0.000647	54	0.0	5	0.00064	148	0.000272	103
R35-0_cleaned	R35-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	58220414	47356226	81.34	['fastq_index_4/R35-0_cleaned/R35-0_cleaned.2.fq', 'fastq_index_4/R35-0_cleaned/R35-0_cleaned.1.fq']	R35-0_cleaned_raw.cram	25992939	0.95	R35-0_cleaned.tsv.xz	44.65	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	1123453	399	0.59	0.304441	391878	0.25146	282154	0.001964	1888	0.001502	1513	0.025457	35867	0.020504	24903	0.000281	77	1.4e-05	21	0.000276	210	0.000102	151
S0233_cleaned	S0233_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	40507256	36312017	89.64	['fastq_index_3/S0233_cleaned/S0233_cleaned.1.fq', 'fastq_index_3/S0233_cleaned/S0233_cleaned.2.fq']	S0233_cleaned_raw.cram	19407385	0.95	S0233_cleaned.tsv.xz	47.91	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	334613	130	0.51	0.242495	120827	0.198994	94754	0.001219	525	0.000812	414	0.033363	12857	0.02438	9415	0.000482	53	2e-06	6	0.000374	101	0.00025	66
DMN_106_cleaned	DMN_106_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-13	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	16113668	13365245	82.94	['fastq_index_1/DMN_106_cleaned/DMN_106_cleaned.1.fq', 'fastq_index_1/DMN_106_cleaned/DMN_106_cleaned.2.fq']	DMN_106_cleaned_raw.cram	7309818	0.95	DMN_106_cleaned.tsv.xz	45.36	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	850639	355	0.6	0.289143	306435	0.242451	230882	0.001568	1536	0.001179	1236	0.026262	27065	0.022198	19966	0.000231	46	6e-06	6	0.00038	188	0.000161	133
R250-0_cleaned	R250-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-13	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	6438304	3896185	60.52	['fastq_index_2/R250-0_cleaned/R250-0_cleaned.2.fq', 'fastq_index_2/R250-0_cleaned/R250-0_cleaned.1.fq']	R250-0_cleaned_raw.cram	2100375	0.95	R250-0_cleaned.tsv.xz	32.62	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	436962	170	0.56	0.268843	159331	0.219205	116935	0.001531	705	0.000962	535	0.024291	15687	0.020226	11225	0.000381	39	1e-06	2	0.000421	130	0.000206	97
BRM00087_cleaned	BRM00087_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-17	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	18756196	16657036	88.81	['output/fastq_index/BRM00087_cleaned/BRM00087_cleaned.2.fq', 'output/fastq_index/BRM00087_cleaned/BRM00087_cleaned.1.fq']	BRM00087_cleaned_raw.cram	8923134	0.95	BRM00087_cleaned.tsv.xz	47.57	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	429225	172	0.61	0.271673	158316	0.232774	115363	0.001402	706	0.001216	555	0.031165	14996	0.0248	10436	0.000202	42	5.5e-05	3	0.000339	130	0.000237	92
control_BRM1008_cleaned	control_BRM1008_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-18	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	30519440	26652185	87.33	['output/fastq_index/control_BRM1008_cleaned/control_BRM1008_cleaned.2.fq', 'output/fastq_index/control_BRM1008_cleaned/control_BRM1008_cleaned.1.fq']	control_BRM1008_cleaned_raw.cram	14412614	0.95	control_BRM1008_cleaned.tsv.xz	47.22	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	563007	208	0.61	0.313682	220127	0.260572	156952	0.001986	957	0.001317	723	0.031141	20785	0.022799	13798	0.000887	70	4e-05	15	0.000672	172	0.000169	122
SNUH-KB-0008_cleaned	SNUH-KB-0008_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	17766276	15433514	86.87	['fastq_index_3/SNUH-KB-0008_cleaned/SNUH-KB-0008_cleaned.2.fq', 'fastq_index_3/SNUH-KB-0008_cleaned/SNUH-KB-0008_cleaned.1.fq']	SNUH-KB-0008_cleaned_raw.cram	8394200	0.95	SNUH-KB-0008_cleaned.tsv.xz	47.25	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	667999	268	0.58	0.275665	240450	0.226806	170467	0.001662	1141	0.001283	877	0.031387	23242	0.023355	15563	0.000371	44	6.1e-05	5	0.000401	133	0.00016	101
G435_cleaned	G435_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	30106278	26653621	88.53	['fastq_index/G435_cleaned/G435_cleaned.1.fq', 'fastq_index/G435_cleaned/G435_cleaned.2.fq']	G435_cleaned_raw.cram	14353570	0.95	G435_cleaned.tsv.xz	47.68	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	795735	245	0.57	0.299645	278216	0.242663	192697	0.001683	1175	0.00128	881	0.026102	26045	0.020444	17557	0.000239	54	1.2e-05	5	0.000438	209	0.000199	143
SSV00146_cleaned	SSV00146_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	40386796	34913796	86.45	['fastq_index_3/SSV00146_cleaned/SSV00146_cleaned.2.fq', 'fastq_index_3/SSV00146_cleaned/SSV00146_cleaned.1.fq']	SSV00146_cleaned_raw.cram	18751128	0.95	SSV00146_cleaned.tsv.xz	46.43	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	840024	303	0.57	0.284678	288609	0.233808	198520	0.001731	1299	0.00132	1006	0.024924	25904	0.019428	17115	0.000304	58	2.1e-05	5	0.000488	185	0.000177	123
DSMC-KB-0007_cleaned	DSMC-KB-0007_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-22	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	23059434	20805763	90.23	['output/fastq_index/DSMC-KB-0007_cleaned/DSMC-KB-0007_cleaned.1.fq', 'output/fastq_index/DSMC-KB-0007_cleaned/DSMC-KB-0007_cleaned.2.fq']	DSMC-KB-0007_cleaned_raw.cram	11163877	0.95	DSMC-KB-0007_cleaned.tsv.xz	48.41	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	268471	89	0.58	0.278957	99523	0.243671	77175	0.001063	447	0.000807	346	0.036912	9594	0.029945	6968	0.000324	51	1e-06	5	0.000531	103	0.000343	72
MN_78_cleaned	MN_78_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	21209038	18289477	86.23	['fastq_index/MN_78_cleaned/MN_78_cleaned.2.fq', 'fastq_index/MN_78_cleaned/MN_78_cleaned.1.fq']	MN_78_cleaned_raw.cram	10080698	0.95	MN_78_cleaned.tsv.xz	47.53	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	592474	190	0.66	0.326514	214750	0.282541	153240	0.001727	920	0.001242	699	0.031744	19505	0.026633	13742	0.000648	55	5.6e-05	11	0.000498	138	0.000211	101
R296-0_cleaned	R296-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	13299556	10984367	82.59	['fastq_index_2/R296-0_cleaned/R296-0_cleaned.1.fq', 'fastq_index_2/R296-0_cleaned/R296-0_cleaned.2.fq']	R296-0_cleaned_raw.cram	5906574	0.95	R296-0_cleaned.tsv.xz	44.41	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	605139	261	0.67	0.326241	217304	0.283613	166997	0.001903	1063	0.001463	886	0.029818	19839	0.026436	15460	0.000328	45	4e-06	4	0.000518	134	0.000264	94
S0009_cleaned	S0009_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	29928946	25787254	86.16	['fastq_index_4/S0009_cleaned/S0009_cleaned.2.fq', 'fastq_index_4/S0009_cleaned/S0009_cleaned.1.fq']	S0009_cleaned_raw.cram	13814406	0.95	S0009_cleaned.tsv.xz	46.16	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	623691	237	0.62	0.291359	217898	0.250401	156194	0.001322	971	0.000976	758	0.031357	19963	0.025533	14057	0.000252	66	2e-06	9	0.000328	144	0.000183	96
R132-0_cleaned	R132-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-23	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	32846866	27296692	83.1	['fastq_index_4/R132-0_cleaned/R132-0_cleaned.2.fq', 'fastq_index_4/R132-0_cleaned/R132-0_cleaned.1.fq']	R132-0_cleaned_raw.cram	14900711	0.95	R132-0_cleaned.tsv.xz	45.36	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	1105837	407	0.64	0.309048	381082	0.26244	277502	0.002081	1875	0.001656	1500	0.022713	32755	0.019175	23407	0.000386	67	3.3e-05	8	0.000402	212	0.000165	153
G463_cleaned	G463_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	36289222	31888164	87.87	['fastq_index/G463_cleaned/G463_cleaned.2.fq', 'fastq_index/G463_cleaned/G463_cleaned.1.fq']	G463_cleaned_raw.cram	17074486	0.95	G463_cleaned.tsv.xz	47.05	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	874455	294	0.59	0.304044	302362	0.249139	216350	0.001684	1360	0.001125	1080	0.025514	27884	0.020321	19483	0.000515	53	1.8e-05	6	0.000658	193	0.000233	141
SNUH-KB-0183_cleaned	SNUH-KB-0183_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	30559354	27451459	89.83	['fastq_index_3/SNUH-KB-0183_cleaned/SNUH-KB-0183_cleaned.1.fq', 'fastq_index_3/SNUH-KB-0183_cleaned/SNUH-KB-0183_cleaned.2.fq']	SNUH-KB-0183_cleaned_raw.cram	14722787	0.95	SNUH-KB-0183_cleaned.tsv.xz	48.18	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	461360	206	0.66	0.294756	173635	0.255013	127479	0.001362	795	0.001123	618	0.040413	15071	0.033088	10400	0.000179	42	8e-06	5	0.000486	124	0.000311	88
D69_cleaned	D69_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-20	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	26018974	22967418	88.27	['output/fastq_index/D69_cleaned/D69_cleaned.1.fq', 'output/fastq_index/D69_cleaned/D69_cleaned.2.fq']	D69_cleaned_raw.cram	12446788	0.95	D69_cleaned.tsv.xz	47.84	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	491373	186	0.71	0.295591	183154	0.267521	137017	0.001914	805	0.001558	639	0.031735	16492	0.030148	12049	0.000482	51	0.00011	10	0.000466	148	0.000317	105
SNUH-KB-0169_cleaned	SNUH-KB-0169_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	35402776	30307738	85.61	['fastq_index_3/SNUH-KB-0169_cleaned/SNUH-KB-0169_cleaned.1.fq', 'fastq_index_3/SNUH-KB-0169_cleaned/SNUH-KB-0169_cleaned.2.fq']	SNUH-KB-0169_cleaned_raw.cram	16176128	0.95	SNUH-KB-0169_cleaned.tsv.xz	45.69	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	580310	207	0.61	0.304271	206853	0.251965	152213	0.001408	931	0.001021	713	0.037454	18445	0.029733	13052	0.000312	67	5e-06	10	0.000553	167	0.000286	114
G268_cleaned	G268_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-05	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	31342300	28110148	89.69	['fastq_index_2/G268_cleaned/G268_cleaned.2.fq', 'fastq_index_2/G268_cleaned/G268_cleaned.1.fq']	G268_cleaned_raw.cram	14956012	0.95	G268_cleaned.tsv.xz	47.72	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	552920	206	0.65	0.298729	199577	0.255622	144207	0.001185	901	0.000831	693	0.035655	19131	0.029144	13672	0.000395	49	3e-06	6	0.000517	134	0.000284	88
DSM00247_cleaned	DSM00247_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-21	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	175642	155506	88.54	['output/fastq_index/DSM00247_cleaned/DSM00247_cleaned.2.fq', 'output/fastq_index/DSM00247_cleaned/DSM00247_cleaned.1.fq']	DSM00247_cleaned_raw.cram	83268	0.95	DSM00247_cleaned.tsv.xz	47.41	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	77384	73	0.57	0.260432	29886	0.21707	23194	0.001202	140	0.001024	114	0.030493	4661	0.02426	3386	0.000183	17	4e-06	1	0.000462	33	0.00029	22
R120-0_cleaned	R120-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-23	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	24023298	20458755	85.16	['fastq_index_4/R120-0_cleaned/R120-0_cleaned.2.fq', 'fastq_index_4/R120-0_cleaned/R120-0_cleaned.1.fq']	R120-0_cleaned_raw.cram	11085436	0.95	R120-0_cleaned.tsv.xz	46.14	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	243765	103	0.7	0.337251	90167	0.298476	72537	0.001425	410	0.001296	344	0.045825	9165	0.040906	6928	9.6e-05	44	6e-06	7	0.000366	81	0.000284	48
R249-0_cleaned	R249-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-13	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	25064856	22576038	90.07	['fastq_index_2/R249-0_cleaned/R249-0_cleaned.2.fq', 'fastq_index_2/R249-0_cleaned/R249-0_cleaned.1.fq']	R249-0_cleaned_raw.cram	12062566	0.95	R249-0_cleaned.tsv.xz	48.13	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	433339	150	0.68	0.30529	154233	0.262752	110015	0.001278	674	0.001079	521	0.049473	13997	0.039938	9673	0.000142	28	1e-06	1	0.000403	125	0.000289	86
KNUH-KB-0043_cleaned	KNUH-KB-0043_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	33383254	27934293	83.68	['fastq_index/KNUH-KB-0043_cleaned/KNUH-KB-0043_cleaned.1.fq', 'fastq_index/KNUH-KB-0043_cleaned/KNUH-KB-0043_cleaned.2.fq']	KNUH-KB-0043_cleaned_raw.cram	14950778	0.95	KNUH-KB-0043_cleaned.tsv.xz	44.79	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	779990	231	0.56	0.292971	273400	0.23732	198008	0.001542	1190	0.001172	947	0.027521	25529	0.022572	18002	0.000299	52	1e-05	8	0.000468	195	0.000257	142
SSV-KB-0079_cleaned	SSV-KB-0079_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	38454714	33689376	87.61	['fastq_index_3/SSV-KB-0079_cleaned/SSV-KB-0079_cleaned.1.fq', 'fastq_index_3/SSV-KB-0079_cleaned/SSV-KB-0079_cleaned.2.fq']	SSV-KB-0079_cleaned_raw.cram	18036728	0.95	SSV-KB-0079_cleaned.tsv.xz	46.9	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	1127150	414	0.59	0.3194	404923	0.26109	290264	0.001502	1865	0.001217	1467	0.028243	37584	0.022504	25756	0.000169	69	2e-06	13	0.000399	228	0.000227	169
DSMC-KB-0104_cleaned	DSMC-KB-0104_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	35798138	32512090	90.82	['fastq_index_2/DSMC-KB-0104_cleaned/DSMC-KB-0104_cleaned.1.fq', 'fastq_index_2/DSMC-KB-0104_cleaned/DSMC-KB-0104_cleaned.2.fq']	DSMC-KB-0104_cleaned_raw.cram	17406818	0.95	DSMC-KB-0104_cleaned.tsv.xz	48.62	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	553009	187	0.63	0.282088	189780	0.243732	134896	0.001406	791	0.000997	590	0.034065	18575	0.029639	12968	0.000373	60	1.3e-05	9	0.0006	158	0.000304	111
SSV-KB-0050_cleaned	SSV-KB-0050_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	45012272	38888320	86.39	['fastq_index_3/SSV-KB-0050_cleaned/SSV-KB-0050_cleaned.1.fq', 'fastq_index_3/SSV-KB-0050_cleaned/SSV-KB-0050_cleaned.2.fq']	SSV-KB-0050_cleaned_raw.cram	20819629	0.95	SSV-KB-0050_cleaned.tsv.xz	46.25	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	883000	310	0.58	0.288595	330255	0.23255	234434	0.001548	1513	0.001143	1164	0.031838	31341	0.023582	21335	0.000379	82	6.7e-05	19	0.000426	215	0.00021	160
DMN_196_cleaned	DMN_196_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	13679152	12131375	88.69	['fastq_index_1/DMN_196_cleaned/DMN_196_cleaned.1.fq', 'fastq_index_1/DMN_196_cleaned/DMN_196_cleaned.2.fq']	DMN_196_cleaned_raw.cram	6593158	0.95	DMN_196_cleaned.tsv.xz	48.2	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	567700	191	0.59	0.292155	205787	0.241533	149762	0.001451	934	0.001097	734	0.033023	18663	0.025041	12944	0.000361	50	8e-06	10	0.000564	156	0.000295	117
R341-0_cleaned	R341-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	21111318	17938746	84.97	['fastq_index_4/R341-0_cleaned/R341-0_cleaned.1.fq', 'fastq_index_4/R341-0_cleaned/R341-0_cleaned.2.fq']	R341-0_cleaned_raw.cram	9761007	0.95	R341-0_cleaned.tsv.xz	46.24	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	365141	132	0.55	0.266954	126039	0.227444	95289	0.001278	598	0.000888	463	0.028363	11418	0.024371	8285	0.000417	58	6e-06	4	0.000426	100	0.00027	61
S0281_cleaned	S0281_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	39592896	35496354	89.65	['fastq_index_3/S0281_cleaned/S0281_cleaned.1.fq', 'fastq_index_3/S0281_cleaned/S0281_cleaned.2.fq']	S0281_cleaned_raw.cram	18919779	0.95	S0281_cleaned.tsv.xz	47.79	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	457535	151	0.62	0.269781	162053	0.236303	121304	0.001327	683	0.00113	551	0.034126	17203	0.02808	12405	0.000179	47	3.2e-05	10	0.000463	115	0.000293	81
S0235_cleaned	S0235_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-04	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	35497418	31305958	88.19	['fastq_index_4/S0235_cleaned/S0235_cleaned.1.fq', 'fastq_index_4/S0235_cleaned/S0235_cleaned.2.fq']	S0235_cleaned_raw.cram	16810246	0.95	S0235_cleaned.tsv.xz	47.36	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	586866	206	0.63	0.290123	211505	0.24188	154512	0.001342	899	0.001026	683	0.023802	18820	0.019238	13057	0.00018	56	7e-06	7	0.00039	158	0.000233	108
SSV-KB-0105_cleaned	SSV-KB-0105_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	29547976	26868324	90.93	['fastq_index_3/SSV-KB-0105_cleaned/SSV-KB-0105_cleaned.1.fq', 'fastq_index_3/SSV-KB-0105_cleaned/SSV-KB-0105_cleaned.2.fq']	SSV-KB-0105_cleaned_raw.cram	14318088	0.95	SSV-KB-0105_cleaned.tsv.xz	48.46	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	472574	247	0.65	0.31144	184200	0.273022	145476	0.001334	831	0.001109	677	0.037895	18993	0.031266	13895	0.000226	71	2.2e-05	18	0.000605	136	0.00038	96
SSV00138_cleaned	SSV00138_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	28588548	25556066	89.39	['fastq_index_3/SSV00138_cleaned/SSV00138_cleaned.1.fq', 'fastq_index_3/SSV00138_cleaned/SSV00138_cleaned.2.fq']	SSV00138_cleaned_raw.cram	13729427	0.95	SSV00138_cleaned.tsv.xz	48.02	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	530219	169	0.58	0.250597	177534	0.211731	123399	0.001341	707	0.001069	554	0.028181	17262	0.020978	11657	0.000364	40	5.2e-05	1	0.000701	130	0.000248	93
KNU00068_cleaned	KNU00068_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	63670524	54927674	86.27	['fastq_index/KNU00068_cleaned/KNU00068_cleaned.1.fq', 'fastq_index/KNU00068_cleaned/KNU00068_cleaned.2.fq']	KNU00068_cleaned_raw.cram	29563923	0.95	KNU00068_cleaned.tsv.xz	46.43	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	1149886	396	0.6	0.308009	392129	0.259273	283657	0.00186	1798	0.001368	1427	0.022452	36997	0.018541	25919	0.000387	80	1.2e-05	12	0.00066	257	0.000171	179
R280-0_cleaned	R280-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	29178566	24374231	83.53	['fastq_index_4/R280-0_cleaned/R280-0_cleaned.2.fq', 'fastq_index_4/R280-0_cleaned/R280-0_cleaned.1.fq']	R280-0_cleaned_raw.cram	13032109	0.95	R280-0_cleaned.tsv.xz	44.66	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	358759	181	0.73	0.341344	143288	0.305712	114260	0.001583	650	0.001347	516	0.048144	15229	0.041395	11523	0.00023	49	3.9e-05	5	0.000457	89	0.000357	69
control_D37_cleaned	control_D37_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-18	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	18923886	16367651	86.49	['output/fastq_index/control_D37_cleaned/control_D37_cleaned.2.fq', 'output/fastq_index/control_D37_cleaned/control_D37_cleaned.1.fq']	control_D37_cleaned_raw.cram	8923203	0.95	control_D37_cleaned.tsv.xz	47.15	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	570013	194	0.57	0.276184	212306	0.232574	154712	0.001391	1004	0.001118	789	0.02748	19863	0.021949	14113	0.000328	61	3.6e-05	12	0.000483	150	0.000242	106
BRM00096_cleaned	BRM00096_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-17	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	45042000	40194574	89.24	['output/fastq_index/BRM00096_cleaned/BRM00096_cleaned.1.fq', 'output/fastq_index/BRM00096_cleaned/BRM00096_cleaned.2.fq']	BRM00096_cleaned_raw.cram	21590047	0.95	BRM00096_cleaned.tsv.xz	47.93	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	586236	200	0.66	0.347501	220335	0.29488	159918	0.002101	928	0.001158	712	0.029433	20414	0.024257	14895	0.001375	81	9.9e-05	17	0.001244	169	0.000549	115
R69-0_cleaned	R69-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	48592420	41197057	84.78	['fastq_index_4/R69-0_cleaned/R69-0_cleaned.1.fq', 'fastq_index_4/R69-0_cleaned/R69-0_cleaned.2.fq']	R69-0_cleaned_raw.cram	22350193	0.95	R69-0_cleaned.tsv.xz	46.0	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	1242441	399	0.59	0.320015	417334	0.265518	307110	0.002103	2017	0.001569	1640	0.024253	36845	0.019491	26835	0.000268	56	1e-06	5	0.000455	241	0.000182	176
R201-0_cleaned	R201-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	33202868	27906795	84.05	['fastq_index_4/R201-0_cleaned/R201-0_cleaned.1.fq', 'fastq_index_4/R201-0_cleaned/R201-0_cleaned.2.fq']	R201-0_cleaned_raw.cram	15192516	0.95	R201-0_cleaned.tsv.xz	45.76	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	712761	254	0.65	0.329831	258975	0.279228	201037	0.002313	1270	0.001537	1051	0.021406	23042	0.018094	17155	0.000635	70	0.000144	10	0.000717	181	0.000367	129
R183-0_cleaned	R183-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	39237226	35116402	89.5	['fastq_index_4/R183-0_cleaned/R183-0_cleaned.2.fq', 'fastq_index_4/R183-0_cleaned/R183-0_cleaned.1.fq']	R183-0_cleaned_raw.cram	18884074	0.95	R183-0_cleaned.tsv.xz	48.13	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	804057	304	0.64	0.310343	283335	0.26549	210327	0.001669	1307	0.001303	1061	0.033563	28111	0.027542	20542	0.000243	56	2.2e-05	10	0.000565	178	0.000227	130
DSM00278_cleaned	DSM00278_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-22	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	35963466	31724082	88.21	['output/fastq_index/DSM00278_cleaned/DSM00278_cleaned.1.fq', 'output/fastq_index/DSM00278_cleaned/DSM00278_cleaned.2.fq']	DSM00278_cleaned_raw.cram	17097241	0.95	DSM00278_cleaned.tsv.xz	47.54	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	671036	263	0.59	0.293196	245016	0.238515	179421	0.001465	1084	0.001088	835	0.03033	25320	0.024798	17361	0.000271	74	1.3e-05	12	0.000468	200	0.000234	145
DSMC-KB-0033_cleaned	DSMC-KB-0033_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-22	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	44205786	39968224	90.41	['output/fastq_index/DSMC-KB-0033_cleaned/DSMC-KB-0033_cleaned.2.fq', 'output/fastq_index/DSMC-KB-0033_cleaned/DSMC-KB-0033_cleaned.1.fq']	DSMC-KB-0033_cleaned_raw.cram	21402873	0.95	DSMC-KB-0033_cleaned.tsv.xz	48.42	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	388951	158	0.59	0.262991	139436	0.225908	107334	0.001433	633	0.00111	510	0.036072	15300	0.027772	11072	0.000258	46	7e-05	7	0.000458	107	0.000293	76
R169-0_cleaned	R169-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	34400324	30420329	88.43	['fastq_index_4/R169-0_cleaned/R169-0_cleaned.2.fq', 'fastq_index_4/R169-0_cleaned/R169-0_cleaned.1.fq']	R169-0_cleaned_raw.cram	16394169	0.95	R169-0_cleaned.tsv.xz	47.66	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	754516	291	0.67	0.316625	270283	0.276703	201969	0.001572	1254	0.001249	1027	0.040484	26232	0.034678	19584	0.000341	56	1e-06	6	0.000482	165	0.000268	114
DMN_125_cleaned	DMN_125_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-13	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	1654806	1452734	87.79	['fastq_index_1/DMN_125_cleaned/DMN_125_cleaned.2.fq', 'fastq_index_1/DMN_125_cleaned/DMN_125_cleaned.1.fq']	DMN_125_cleaned_raw.cram	786758	0.95	DMN_125_cleaned.tsv.xz	47.54	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	264353	148	0.6	0.294428	98123	0.245275	74345	0.001665	457	0.0012	358	0.031017	12375	0.024427	9181	0.000418	36	2.5e-05	1	0.000486	68	0.000218	41
D106_cleaned	D106_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-18	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	33086990	29221394	88.32	['output/fastq_index/D106_cleaned/D106_cleaned.1.fq', 'output/fastq_index/D106_cleaned/D106_cleaned.2.fq']	D106_cleaned_raw.cram	15768981	0.95	D106_cleaned.tsv.xz	47.66	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	669088	212	0.64	0.332413	235664	0.285349	162550	0.001783	1057	0.001528	792	0.027803	22903	0.021865	15049	0.000284	48	0.000112	11	0.000398	157	0.000201	109
DSMC-KB-0021_cleaned	DSMC-KB-0021_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-22	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	38359428	34010520	88.66	['output/fastq_index/DSMC-KB-0021_cleaned/DSMC-KB-0021_cleaned.1.fq', 'output/fastq_index/DSMC-KB-0021_cleaned/DSMC-KB-0021_cleaned.2.fq']	DSMC-KB-0021_cleaned_raw.cram	18304118	0.95	DSMC-KB-0021_cleaned.tsv.xz	47.72	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	505543	205	0.65	0.29461	191750	0.261649	141975	0.001799	860	0.0013	672	0.034992	18776	0.028847	13063	0.000786	71	6.4e-05	13	0.000506	134	0.000203	101
R47-0_cleaned	R47-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	31226136	27995773	89.65	['fastq_index_4/R47-0_cleaned/R47-0_cleaned.2.fq', 'fastq_index_4/R47-0_cleaned/R47-0_cleaned.1.fq']	R47-0_cleaned_raw.cram	15129281	0.95	R47-0_cleaned.tsv.xz	48.45	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	563551	200	0.63	0.298572	197725	0.257598	144823	0.001735	857	0.001197	665	0.035108	21344	0.029228	15110	0.00068	64	5e-06	9	0.000655	168	0.000306	121
R88-0_cleaned	R88-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	26743282	23895785	89.35	['fastq_index_4/R88-0_cleaned/R88-0_cleaned.2.fq', 'fastq_index_4/R88-0_cleaned/R88-0_cleaned.1.fq']	R88-0_cleaned_raw.cram	12787970	0.95	R88-0_cleaned.tsv.xz	47.82	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	784287	265	0.59	0.307295	280450	0.251933	204306	0.001503	1278	0.001136	986	0.03099	27234	0.02346	18998	0.000244	56	9e-06	7	0.000515	223	0.000233	150
MN_BRMKID764_cleaned	MN_BRMKID764_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	12811348	11169973	87.19	['fastq_index/MN_BRMKID764_cleaned/MN_BRMKID764_cleaned.2.fq', 'fastq_index/MN_BRMKID764_cleaned/MN_BRMKID764_cleaned.1.fq']	MN_BRMKID764_cleaned_raw.cram	6077476	0.95	MN_BRMKID764_cleaned.tsv.xz	47.44	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	214064	66	0.64	0.298367	88084	0.261257	72435	0.001552	426	0.001162	339	0.041288	7269	0.034152	5849	0.000394	51	4.2e-05	10	0.000776	88	0.000428	59
G236_cleaned	G236_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	3808098	3155595	82.87	['fastq_index_1/G236_cleaned/G236_cleaned.2.fq', 'fastq_index_1/G236_cleaned/G236_cleaned.1.fq']	G236_cleaned_raw.cram	1684215	0.95	G236_cleaned.tsv.xz	44.23	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	330673	195	0.63	0.290648	127382	0.249673	98300	0.001652	616	0.001289	512	0.035263	14597	0.026964	10660	0.000527	54	2.3e-05	8	0.000542	106	0.000318	68
SSV-KB-0078_cleaned	SSV-KB-0078_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	38248638	33027087	86.35	['fastq_index_3/SSV-KB-0078_cleaned/SSV-KB-0078_cleaned.2.fq', 'fastq_index_3/SSV-KB-0078_cleaned/SSV-KB-0078_cleaned.1.fq']	SSV-KB-0078_cleaned_raw.cram	17739039	0.95	SSV-KB-0078_cleaned.tsv.xz	46.38	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	843130	336	0.55	0.263111	291210	0.216208	211941	0.001492	1364	0.001181	1066	0.027612	28361	0.021299	20296	0.000356	72	3.2e-05	9	0.000413	198	0.00022	139
igAN_186_cleaned	igAN_186_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	16447602	13932140	84.71	['fastq_index/igAN_186_cleaned/igAN_186_cleaned.2.fq', 'fastq_index/igAN_186_cleaned/igAN_186_cleaned.1.fq']	igAN_186_cleaned_raw.cram	7606830	0.95	igAN_186_cleaned.tsv.xz	46.25	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	546173	175	0.6	0.34082	213142	0.262226	149612	0.001222	905	0.000997	671	0.033168	18502	0.022811	12487	0.000231	62	1.5e-05	16	0.000415	153	0.000236	114
R93-0_cleaned	R93-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	30375096	25916993	85.32	['fastq_index_4/R93-0_cleaned/R93-0_cleaned.2.fq', 'fastq_index_4/R93-0_cleaned/R93-0_cleaned.1.fq']	R93-0_cleaned_raw.cram	14153755	0.95	R93-0_cleaned.tsv.xz	46.6	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	668949	238	0.7	0.409288	249128	0.369632	194851	0.002501	1110	0.002301	903	0.029294	23526	0.02498	17898	0.000238	58	8.4e-05	11	0.000539	196	0.000392	147
S0164_cleaned	S0164_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	51172328	46356902	90.59	['fastq_index_4/S0164_cleaned/S0164_cleaned.2.fq', 'fastq_index_4/S0164_cleaned/S0164_cleaned.1.fq']	S0164_cleaned_raw.cram	24736096	0.95	S0164_cleaned.tsv.xz	48.34	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	608860	197	0.66	0.306531	223982	0.266277	166465	0.001257	946	0.001079	748	0.041313	21069	0.033206	14890	0.000117	78	1.1e-05	20	0.000503	176	0.000358	132
R135-0_cleaned	R135-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	22575228	19643314	87.01	['fastq_index_4/R135-0_cleaned/R135-0_cleaned.2.fq', 'fastq_index_4/R135-0_cleaned/R135-0_cleaned.1.fq']	R135-0_cleaned_raw.cram	10590697	0.95	R135-0_cleaned.tsv.xz	46.91	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	518512	227	0.69	0.39989	186015	0.347752	141301	0.00183	908	0.001544	745	0.02247	18373	0.019247	14142	0.000241	60	1e-05	4	0.000552	127	0.000422	86
DSMC-KB-0176_cleaned	DSMC-KB-0176_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-04	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	38725984	34691800	89.58	['fastq_index_2/DSMC-KB-0176_cleaned/DSMC-KB-0176_cleaned.2.fq', 'fastq_index_2/DSMC-KB-0176_cleaned/DSMC-KB-0176_cleaned.1.fq']	DSMC-KB-0176_cleaned_raw.cram	18429983	0.95	DSMC-KB-0176_cleaned.tsv.xz	47.59	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	644750	222	0.59	0.264387	233025	0.225895	164187	0.001549	1015	0.001234	775	0.033939	23607	0.025772	15574	0.000258	48	6e-05	4	0.00025	158	0.000157	117
BRMH-KB-0059_cleaned	BRMH-KB-0059_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-17	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	52768234	45601827	86.42	['output/fastq_index/BRMH-KB-0059_cleaned/BRMH-KB-0059_cleaned.1.fq', 'output/fastq_index/BRMH-KB-0059_cleaned/BRMH-KB-0059_cleaned.2.fq']	BRMH-KB-0059_cleaned_raw.cram	24533610	0.95	BRMH-KB-0059_cleaned.tsv.xz	46.49	2.0.22	2026-04-07	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	663887	242	0.64	0.29999	238777	0.265452	173363	0.002045	1102	0.00135	850	0.02947	24391	0.025186	17154	0.000807	56	4e-06	12	0.000411	158	6.1e-05	122
R78-0_cleaned	R78-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	51300154	39147282	76.31	['fastq_index_4/R78-0_cleaned/R78-0_cleaned.1.fq', 'fastq_index_4/R78-0_cleaned/R78-0_cleaned.2.fq']	R78-0_cleaned_raw.cram	21045756	0.95	R78-0_cleaned.tsv.xz	41.02	2.0.22	2026-04-07	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	989702	367	0.62	0.321682	345309	0.272534	252540	0.001758	1643	0.00146	1321	0.035409	33500	0.028805	23926	0.000258	70	2e-06	8	0.000404	212	0.000198	153
MN_126_cleaned	MN_126_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	17287432	15336620	88.72	['fastq_index/MN_126_cleaned/MN_126_cleaned.1.fq', 'fastq_index/MN_126_cleaned/MN_126_cleaned.2.fq']	MN_126_cleaned_raw.cram	8356615	0.95	MN_126_cleaned.tsv.xz	48.34	2.0.22	2026-04-07	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	235034	76	0.61	0.278007	92780	0.23761	71912	0.001558	423	0.001052	311	0.036144	9109	0.030522	6740	0.000244	55	2.6e-05	7	0.000588	94	0.000362	59
SNUH-KB-0067_cleaned	SNUH-KB-0067_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	29109792	25369356	87.15	['fastq_index_3/SNUH-KB-0067_cleaned/SNUH-KB-0067_cleaned.2.fq', 'fastq_index_3/SNUH-KB-0067_cleaned/SNUH-KB-0067_cleaned.1.fq']	SNUH-KB-0067_cleaned_raw.cram	13702409	0.95	SNUH-KB-0067_cleaned.tsv.xz	47.07	2.0.22	2026-04-07	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	593775	171	0.58	0.300206	218039	0.252522	158913	0.001327	912	0.001089	679	0.028374	20546	0.021855	13747	0.000281	64	2.9e-05	12	0.000425	174	0.000219	116
SNUH-KB-0070_cleaned	SNUH-KB-0070_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	11706106	10463014	89.38	['fastq_index_3/SNUH-KB-0070_cleaned/SNUH-KB-0070_cleaned.2.fq', 'fastq_index_3/SNUH-KB-0070_cleaned/SNUH-KB-0070_cleaned.1.fq']	SNUH-KB-0070_cleaned_raw.cram	5645258	0.95	SNUH-KB-0070_cleaned.tsv.xz	48.22	2.0.22	2026-04-07	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	412796	144	0.58	0.295664	150861	0.242515	110114	0.001244	659	0.000872	513	0.034003	14010	0.025905	9586	0.000279	44	1e-06	7	0.000547	117	0.000285	86
SSV00117_cleaned	SSV00117_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	37887748	33663986	88.85	['fastq_index_3/SSV00117_cleaned/SSV00117_cleaned.1.fq', 'fastq_index_3/SSV00117_cleaned/SSV00117_cleaned.2.fq']	SSV00117_cleaned_raw.cram	18068322	0.95	SSV00117_cleaned.tsv.xz	47.69	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	751722	238	0.63	0.315092	270865	0.267698	194085	0.001253	1154	0.000979	903	0.02878	25981	0.023207	17522	0.000145	57	1e-06	9	0.000374	185	0.000222	131
control_1014_cleaned	control_1014_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-17	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	18061208	16134518	89.33	['output/fastq_index/control_1014_cleaned/control_1014_cleaned.1.fq', 'output/fastq_index/control_1014_cleaned/control_1014_cleaned.2.fq']	control_1014_cleaned_raw.cram	8733080	0.95	control_1014_cleaned.tsv.xz	48.35	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	177799	56	0.54	0.25298	64456	0.211895	50197	0.001608	275	0.000849	211	0.041746	5487	0.032341	4081	0.001336	45	6e-06	2	0.00079	65	0.00037	45
R122-0_cleaned	R122-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	63518	53954	84.94	['fastq_index_4/R122-0_cleaned/R122-0_cleaned.2.fq', 'fastq_index_4/R122-0_cleaned/R122-0_cleaned.1.fq']	R122-0_cleaned_raw.cram	29152	0.95	R122-0_cleaned.tsv.xz	45.9	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	32555	33	0.62	0.287034	13325	0.240308	10781	0.00185	67	0.001261	46	0.027968	2009	0.023205	1614	0.000321	19	2.6e-05	1	0.000442	21	0.000246	8
MN_175_cleaned	MN_175_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	24672330	21238596	86.08	['fastq_index/MN_175_cleaned/MN_175_cleaned.1.fq', 'fastq_index/MN_175_cleaned/MN_175_cleaned.2.fq']	MN_175_cleaned_raw.cram	11604181	0.95	MN_175_cleaned.tsv.xz	47.03	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	854158	326	0.61	0.308586	306372	0.256695	223100	0.001916	1544	0.001447	1211	0.026106	29019	0.02137	20640	0.000348	52	1.4e-05	7	0.000385	185	0.000151	134
SSV-KB-0062_cleaned	SSV-KB-0062_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	48475080	42920120	88.54	['fastq_index_3/SSV-KB-0062_cleaned/SSV-KB-0062_cleaned.1.fq', 'fastq_index_3/SSV-KB-0062_cleaned/SSV-KB-0062_cleaned.2.fq']	SSV-KB-0062_cleaned_raw.cram	23038613	0.95	SSV-KB-0062_cleaned.tsv.xz	47.53	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	897275	270	0.57	0.269103	302855	0.222955	212673	0.001452	1344	0.001154	1024	0.02556	29290	0.019755	19817	0.000173	57	2e-05	9	0.000383	214	0.000199	153
G446_cleaned	G446_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	41603892	37460025	90.04	['fastq_index/G446_cleaned/G446_cleaned.2.fq', 'fastq_index/G446_cleaned/G446_cleaned.1.fq']	G446_cleaned_raw.cram	19951362	0.95	G446_cleaned.tsv.xz	47.96	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	557963	200	0.6	0.264704	197175	0.220971	141463	0.00103	842	0.000758	665	0.035945	19322	0.027965	13690	0.000221	52	1e-06	5	0.000542	152	0.000255	103
BRMH-KB-0007_cleaned	BRMH-KB-0007_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-17	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	10226146	8937255	87.4	['output/fastq_index/BRMH-KB-0007_cleaned/BRMH-KB-0007_cleaned.2.fq', 'output/fastq_index/BRMH-KB-0007_cleaned/BRMH-KB-0007_cleaned.1.fq']	BRMH-KB-0007_cleaned_raw.cram	4800376	0.95	BRMH-KB-0007_cleaned.tsv.xz	46.94	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	230839	91	0.72	0.316111	93104	0.284569	71739	0.00163	455	0.001314	349	0.041694	7175	0.039097	5227	0.000453	53	2.6e-05	12	0.000442	66	0.00026	42
KNUH-KB-0033_cleaned	KNUH-KB-0033_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	59022030	51795661	87.76	['fastq_index_4/KNUH-KB-0033_cleaned/KNUH-KB-0033_cleaned.1.fq', 'fastq_index_4/KNUH-KB-0033_cleaned/KNUH-KB-0033_cleaned.2.fq']	KNUH-KB-0033_cleaned_raw.cram	27852742	0.95	KNUH-KB-0033_cleaned.tsv.xz	47.19	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	615500	246	0.65	0.331543	223053	0.297491	175327	0.001404	978	0.001057	816	0.017694	21418	0.015034	15876	0.000379	77	1.5e-05	16	0.000446	177	0.000271	127
control_D21_cleaned	control_D21_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-18	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	12110570	10734769	88.64	['output/fastq_index/control_D21_cleaned/control_D21_cleaned.2.fq', 'output/fastq_index/control_D21_cleaned/control_D21_cleaned.1.fq']	control_D21_cleaned_raw.cram	5853164	0.95	control_D21_cleaned.tsv.xz	48.33	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	451026	148	0.62	0.317977	164744	0.262686	116861	0.001465	667	0.001049	487	0.030465	15124	0.023859	9974	0.000319	38	2e-06	4	0.000541	121	0.000289	93
G011_cleaned	G011_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-05	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	34337954	27189580	79.18	['fastq_index_2/G011_cleaned/G011_cleaned.2.fq', 'fastq_index_2/G011_cleaned/G011_cleaned.1.fq']	G011_cleaned_raw.cram	14477258	0.95	G011_cleaned.tsv.xz	42.16	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	243752	123	0.74	0.498545	100584	0.44435	80320	0.002858	489	0.002597	403	0.023894	10968	0.020533	8244	0.000423	58	0.000189	12	0.000421	79	0.000282	53
MN_BRMKID816_cleaned	MN_BRMKID816_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	17018212	15295784	89.88	['fastq_index/MN_BRMKID816_cleaned/MN_BRMKID816_cleaned.2.fq', 'fastq_index/MN_BRMKID816_cleaned/MN_BRMKID816_cleaned.1.fq']	MN_BRMKID816_cleaned_raw.cram	8287578	0.95	MN_BRMKID816_cleaned.tsv.xz	48.7	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	87130	28	0.59	0.258855	35510	0.226447	30269	0.001218	158	0.000972	141	0.042735	3151	0.036743	2540	0.002645	12	4e-06	3	0.000656	28	0.000361	19
R85-0_cleaned	R85-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	45564776	39767482	87.28	['fastq_index_4/R85-0_cleaned/R85-0_cleaned.1.fq', 'fastq_index_4/R85-0_cleaned/R85-0_cleaned.2.fq']	R85-0_cleaned_raw.cram	21639194	0.95	R85-0_cleaned.tsv.xz	47.49	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	943058	368	0.65	0.32812	335982	0.281993	247698	0.001832	1627	0.001559	1321	0.032396	33078	0.025684	23624	0.000288	58	5.2e-05	9	0.000391	204	0.000207	144
control_D31_cleaned	control_D31_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-18	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	22744512	20521656	90.23	['output/fastq_index/control_D31_cleaned/control_D31_cleaned.1.fq', 'output/fastq_index/control_D31_cleaned/control_D31_cleaned.2.fq']	control_D31_cleaned_raw.cram	11054193	0.95	control_D31_cleaned.tsv.xz	48.6	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	324133	85	0.66	0.323332	120359	0.277196	89024	0.001328	488	0.001198	388	0.044847	10129	0.03439	6578	0.000102	40	8e-06	5	0.000538	101	0.000406	66
S0300_cleaned	S0300_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	40346578	34255218	84.9	['fastq_index_3/S0300_cleaned/S0300_cleaned.1.fq', 'fastq_index_3/S0300_cleaned/S0300_cleaned.2.fq']	S0300_cleaned_raw.cram	18324164	0.95	S0300_cleaned.tsv.xz	45.42	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	237222	121	0.69	0.4317	99493	0.363529	72882	0.002874	462	0.001405	338	0.015492	8941	0.012442	6294	0.002085	56	0.000235	11	0.001909	90	0.000731	56
R90-0_cleaned	R90-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	35632508	31405225	88.14	['fastq_index_4/R90-0_cleaned/R90-0_cleaned.2.fq', 'fastq_index_4/R90-0_cleaned/R90-0_cleaned.1.fq']	R90-0_cleaned_raw.cram	17090500	0.95	R90-0_cleaned.tsv.xz	47.96	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	681935	282	0.7	0.386238	262183	0.3435	196018	0.002338	1162	0.001925	920	0.028987	24694	0.02422	17443	0.000399	66	1.4e-05	11	0.000856	214	0.000531	150
BRM00097_cleaned	BRM00097_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-17	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	25392026	21434899	84.42	['output/fastq_index/BRM00097_cleaned/BRM00097_cleaned.1.fq', 'output/fastq_index/BRM00097_cleaned/BRM00097_cleaned.2.fq']	BRM00097_cleaned_raw.cram	11531675	0.95	BRM00097_cleaned.tsv.xz	45.41	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	895840	345	0.57	0.299268	316376	0.245441	233742	0.001912	1481	0.001387	1178	0.018901	28350	0.015513	20357	0.000257	51	1e-06	5	0.000418	205	0.000169	148
SSV-KB-0083_cleaned	SSV-KB-0083_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	40621410	34910552	85.94	['fastq_index_3/SSV-KB-0083_cleaned/SSV-KB-0083_cleaned.1.fq', 'fastq_index_3/SSV-KB-0083_cleaned/SSV-KB-0083_cleaned.2.fq']	SSV-KB-0083_cleaned_raw.cram	18832595	0.95	SSV-KB-0083_cleaned.tsv.xz	46.36	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	1173728	407	0.55	0.28642	398993	0.231945	288462	0.001749	1801	0.00131	1455	0.022746	38292	0.018025	26312	0.000308	60	1e-05	7	0.000548	242	0.000185	179
SSV-KB-0081_cleaned	SSV-KB-0081_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	50604254	43925141	86.8	['fastq_index_3/SSV-KB-0081_cleaned/SSV-KB-0081_cleaned.1.fq', 'fastq_index_3/SSV-KB-0081_cleaned/SSV-KB-0081_cleaned.2.fq']	SSV-KB-0081_cleaned_raw.cram	23697785	0.95	SSV-KB-0081_cleaned.tsv.xz	46.83	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	877357	331	0.57	0.252715	305821	0.210021	210359	0.001501	1373	0.001148	1071	0.028669	30365	0.021619	20245	0.000341	74	5.7e-05	13	0.000319	196	0.000175	141
R170-0_cleaned	R170-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	25905830	22739484	87.78	['fastq_index_4/R170-0_cleaned/R170-0_cleaned.2.fq', 'fastq_index_4/R170-0_cleaned/R170-0_cleaned.1.fq']	R170-0_cleaned_raw.cram	12307616	0.95	R170-0_cleaned.tsv.xz	47.51	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	679169	282	0.65	0.282223	236336	0.246742	177148	0.001748	1179	0.0012	922	0.028611	22063	0.024801	16329	0.000434	56	1.3e-05	6	0.000453	152	0.000249	112
DSM00280_cleaned	DSM00280_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-22	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	36395196	32301035	88.75	['output/fastq_index/DSM00280_cleaned/DSM00280_cleaned.1.fq', 'output/fastq_index/DSM00280_cleaned/DSM00280_cleaned.2.fq']	DSM00280_cleaned_raw.cram	17227415	0.95	DSM00280_cleaned.tsv.xz	47.33	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	610080	185	0.58	0.24352	209699	0.21075	149932	0.001287	933	0.001014	730	0.025192	20033	0.021348	13622	0.000228	52	1e-05	8	0.000431	176	0.000211	124
MN_BRMKID707_cleaned	MN_BRMKID707_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	15001664	12799391	85.32	['fastq_index/MN_BRMKID707_cleaned/MN_BRMKID707_cleaned.2.fq', 'fastq_index/MN_BRMKID707_cleaned/MN_BRMKID707_cleaned.1.fq']	MN_BRMKID707_cleaned_raw.cram	7038319	0.95	MN_BRMKID707_cleaned.tsv.xz	46.92	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	473670	176	0.62	0.306323	186724	0.258616	138647	0.001785	826	0.001562	645	0.03445	18257	0.027951	13004	0.000189	51	4.7e-05	15	0.000218	116	0.000133	88
DMN_207_cleaned	DMN_207_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	11683032	10190654	87.23	['fastq_index_1/DMN_207_cleaned/DMN_207_cleaned.1.fq', 'fastq_index_1/DMN_207_cleaned/DMN_207_cleaned.2.fq']	DMN_207_cleaned_raw.cram	5560376	0.95	DMN_207_cleaned.tsv.xz	47.59	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	575483	225	0.61	0.298576	211827	0.252747	157546	0.001771	1035	0.001307	830	0.031099	20008	0.025338	14441	0.000242	43	2e-06	5	0.000518	154	0.00022	107
D64_cleaned	D64_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-20	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	18763316	16496381	87.92	['output/fastq_index/D64_cleaned/D64_cleaned.1.fq', 'output/fastq_index/D64_cleaned/D64_cleaned.2.fq']	D64_cleaned_raw.cram	8922169	0.95	D64_cleaned.tsv.xz	47.55	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	555842	233	0.62	0.292996	191553	0.247405	138080	0.001518	928	0.001254	726	0.033969	20354	0.026921	14228	0.000278	52	3.4e-05	7	0.000394	127	0.000197	93
MN-2_cleaned	MN-2_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	26362252	23637426	89.66	['fastq_index/MN-2_cleaned/MN-2_cleaned.1.fq', 'fastq_index/MN-2_cleaned/MN-2_cleaned.2.fq']	MN-2_cleaned_raw.cram	12813490	0.95	MN-2_cleaned.tsv.xz	48.61	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	412534	142	0.66	0.288362	144271	0.242025	103185	0.001641	640	0.000962	493	0.046536	14033	0.037659	9823	0.000178	40	0.0	3	0.000809	114	0.000297	78
G214_cleaned	G214_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-05	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	28242720	24850521	87.99	['fastq_index_2/G214_cleaned/G214_cleaned.1.fq', 'fastq_index_2/G214_cleaned/G214_cleaned.2.fq']	G214_cleaned_raw.cram	13336919	0.95	G214_cleaned.tsv.xz	47.22	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	449471	198	0.63	0.293297	173885	0.253833	124319	0.001636	776	0.001398	601	0.034509	17139	0.026647	11387	0.000339	49	6.7e-05	14	0.000309	97	0.000166	74
G302_cleaned	G302_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	37929964	33891512	89.35	['fastq_index_4/G302_cleaned/G302_cleaned.2.fq', 'fastq_index_4/G302_cleaned/G302_cleaned.1.fq']	G302_cleaned_raw.cram	17981716	0.95	G302_cleaned.tsv.xz	47.41	2.0.22	2026-04-15	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	185643	110	0.63	0.333878	78665	0.277252	62259	0.00164	395	0.001501	333	0.053218	8730	0.041928	6601	8.2e-05	47	3.1e-05	5	0.000427	69	0.000314	46
SNUH-KB-0031_cleaned	SNUH-KB-0031_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	2676772	539031	20.14	['fastq_index_3/SNUH-KB-0031_cleaned/SNUH-KB-0031_cleaned.1.fq', 'fastq_index_3/SNUH-KB-0031_cleaned/SNUH-KB-0031_cleaned.2.fq']	SNUH-KB-0031_cleaned_raw.cram	279453	0.95	SNUH-KB-0031_cleaned.tsv.xz	10.44	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	89768	73	0.63	0.256629	36634	0.233706	28798	0.001662	191	0.001458	157	0.019394	4976	0.017043	3729	0.000423	32	7e-05	7	0.000316	39	0.00021	21
G362_cleaned	G362_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-06	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	45177064	40770774	90.25	['fastq_index_2/G362_cleaned/G362_cleaned.1.fq', 'fastq_index_2/G362_cleaned/G362_cleaned.2.fq']	G362_cleaned_raw.cram	21797532	0.95	G362_cleaned.tsv.xz	48.25	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	421152	141	0.62	0.35563	160303	0.28787	117103	0.001741	729	0.001264	551	0.025821	14740	0.020279	10151	0.000359	62	1.9e-05	9	0.000532	143	0.000261	96
G436_cleaned	G436_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	29363400	26682913	90.87	['fastq_index/G436_cleaned/G436_cleaned.2.fq', 'fastq_index/G436_cleaned/G436_cleaned.1.fq']	G436_cleaned_raw.cram	14291765	0.95	G436_cleaned.tsv.xz	48.67	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	420651	143	0.68	0.312986	152331	0.276208	113827	0.001358	659	0.00115	525	0.046596	14897	0.038817	10676	0.0002	38	7e-06	8	0.000532	120	0.000376	91
control_1020_cleaned	control_1020_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-18	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	14312614	12492530	87.28	['output/fastq_index/control_1020_cleaned/control_1020_cleaned.1.fq', 'output/fastq_index/control_1020_cleaned/control_1020_cleaned.2.fq']	control_1020_cleaned_raw.cram	6844128	0.95	control_1020_cleaned.tsv.xz	47.82	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	276710	98	0.66	0.313948	104503	0.277378	74785	0.001613	472	0.001186	357	0.029149	9876	0.023062	6584	0.000539	37	5.8e-05	7	0.000675	87	0.000238	62
control_D29_cleaned	control_D29_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-18	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	6881996	6010260	87.33	['output/fastq_index/control_D29_cleaned/control_D29_cleaned.1.fq', 'output/fastq_index/control_D29_cleaned/control_D29_cleaned.2.fq']	control_D29_cleaned_raw.cram	3298447	0.95	control_D29_cleaned.tsv.xz	47.93	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	308865	107	0.66	0.318225	115196	0.279952	92774	0.001525	527	0.001193	432	0.031143	11248	0.027174	9089	0.000535	47	1.5e-05	7	0.000571	95	0.00031	69
DMN_158_cleaned	DMN_158_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-13	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	18897334	16551596	87.59	['fastq_index_1/DMN_158_cleaned/DMN_158_cleaned.2.fq', 'fastq_index_1/DMN_158_cleaned/DMN_158_cleaned.1.fq']	DMN_158_cleaned_raw.cram	8998488	0.95	DMN_158_cleaned.tsv.xz	47.62	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	258618	70	0.74	0.403081	90746	0.370818	74474	0.00192	386	0.001692	317	0.031136	8533	0.027109	6758	0.000449	42	0.000208	6	0.000414	72	0.000232	53
R67-0_cleaned	R67-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	39813894	34698465	87.15	['fastq_index_4/R67-0_cleaned/R67-0_cleaned.1.fq', 'fastq_index_4/R67-0_cleaned/R67-0_cleaned.2.fq']	R67-0_cleaned_raw.cram	18768199	0.95	R67-0_cleaned.tsv.xz	47.14	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	855890	286	0.6	0.312265	298479	0.257869	208589	0.001747	1333	0.001439	1045	0.030292	27757	0.024917	19063	0.000273	45	3.8e-05	5	0.0004	196	0.000179	132
BRM00116_cleaned	BRM00116_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-17	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	46520330	41638596	89.51	['output/fastq_index/BRM00116_cleaned/BRM00116_cleaned.1.fq', 'output/fastq_index/BRM00116_cleaned/BRM00116_cleaned.2.fq']	BRM00116_cleaned_raw.cram	22207800	0.95	BRM00116_cleaned.tsv.xz	47.74	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	683340	246	0.63	0.281975	238854	0.237899	173415	0.001306	1033	0.000991	802	0.033221	21895	0.027351	15306	0.000246	58	1.3e-05	5	0.000484	177	0.000279	129
control_BRMKID814_cleaned	control_BRMKID814_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-18	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	17948022	15921479	88.71	['output/fastq_index/control_BRMKID814_cleaned/control_BRMKID814_cleaned.2.fq', 'output/fastq_index/control_BRMKID814_cleaned/control_BRMKID814_cleaned.1.fq']	control_BRMKID814_cleaned_raw.cram	8644692	0.95	control_BRMKID814_cleaned.tsv.xz	48.17	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	543769	169	0.67	0.308251	194523	0.265077	137991	0.001318	793	0.000977	610	0.035679	17559	0.030178	12256	0.000342	46	0.0	1	0.000538	150	0.000296	105
R146-0_cleaned	R146-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	27206348	23855341	87.68	['fastq_index_4/R146-0_cleaned/R146-0_cleaned.1.fq', 'fastq_index_4/R146-0_cleaned/R146-0_cleaned.2.fq']	R146-0_cleaned_raw.cram	12811635	0.95	R146-0_cleaned.tsv.xz	47.09	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	501364	136	0.61	0.316766	177830	0.258979	141843	0.00115	774	0.000895	642	0.032989	18709	0.025003	14809	0.000207	42	0.0	3	0.000511	149	0.000287	110
control_1005_cleaned	control_1005_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-17	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	21270108	18432537	86.66	['output/fastq_index/control_1005_cleaned/control_1005_cleaned.2.fq', 'output/fastq_index/control_1005_cleaned/control_1005_cleaned.1.fq']	control_1005_cleaned_raw.cram	10102147	0.95	control_1005_cleaned.tsv.xz	47.49	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	695760	244	0.61	0.291108	247554	0.245673	176070	0.001616	1117	0.001323	910	0.032196	23407	0.025301	15733	0.00032	37	3.7e-05	2	0.000367	148	0.000134	112
SSV-KB-0073_cleaned	SSV-KB-0073_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	36355204	33001862	90.78	['fastq_index_3/SSV-KB-0073_cleaned/SSV-KB-0073_cleaned.1.fq', 'fastq_index_3/SSV-KB-0073_cleaned/SSV-KB-0073_cleaned.2.fq']	SSV-KB-0073_cleaned_raw.cram	17597234	0.95	SSV-KB-0073_cleaned.tsv.xz	48.4	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	777963	292	0.66	0.311352	273414	0.269491	194243	0.001152	1176	0.00096	918	0.032247	27278	0.026923	18569	0.000127	58	1e-06	7	0.0005	192	0.000291	137
R367-0_cleaned	R367-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	32396678	27032577	83.44	['fastq_index_4/R367-0_cleaned/R367-0_cleaned.1.fq', 'fastq_index_4/R367-0_cleaned/R367-0_cleaned.2.fq']	R367-0_cleaned_raw.cram	14548896	0.95	R367-0_cleaned.tsv.xz	44.91	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	754063	253	0.61	0.326497	283305	0.270642	213091	0.001618	1274	0.00129	1027	0.035988	25851	0.028805	19477	0.000297	73	2e-05	13	0.000438	186	0.000258	140
G391_cleaned	G391_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-16	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	27563232	24663077	89.48	['output/fastq_index/G391_cleaned/G391_cleaned.1.fq', 'output/fastq_index/G391_cleaned/G391_cleaned.2.fq']	G391_cleaned_raw.cram	13319388	0.95	G391_cleaned.tsv.xz	48.32	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	514432	164	0.57	0.294794	190025	0.233057	136001	0.00125	852	0.000817	628	0.034229	17491	0.025642	12531	0.000398	37	2e-06	6	0.000412	129	0.000263	95
R217-0_cleaned	R217-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-13	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	22002204	18738731	85.17	['fastq_index_2/R217-0_cleaned/R217-0_cleaned.2.fq', 'fastq_index_2/R217-0_cleaned/R217-0_cleaned.1.fq']	R217-0_cleaned_raw.cram	10088759	0.95	R217-0_cleaned.tsv.xz	45.85	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	244489	91	0.7	0.399018	96030	0.342942	76804	0.004253	461	0.001459	378	0.027258	8284	0.023885	6396	0.002813	56	0.000112	11	0.001577	75	0.00049	47
KNU00074_cleaned	KNU00074_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	77756772	65756463	84.57	['fastq_index/KNU00074_cleaned/KNU00074_cleaned.1.fq', 'fastq_index/KNU00074_cleaned/KNU00074_cleaned.2.fq']	KNU00074_cleaned_raw.cram	35407528	0.95	KNU00074_cleaned.tsv.xz	45.54	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	1286263	386	0.56	0.268868	441278	0.222877	316186	0.001399	1939	0.0011	1545	0.028729	42731	0.022582	29189	0.000277	73	2.6e-05	12	0.000371	268	0.000175	192
G467_cleaned	G467_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	33067774	29614833	89.56	['fastq_index/G467_cleaned/G467_cleaned.2.fq', 'fastq_index/G467_cleaned/G467_cleaned.1.fq']	G467_cleaned_raw.cram	15834707	0.95	G467_cleaned.tsv.xz	47.89	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	675007	248	0.59	0.286013	250508	0.236644	179090	0.001492	1119	0.001128	843	0.029323	24550	0.022945	16629	0.000416	60	3e-05	7	0.000558	171	0.000195	115
G321_cleaned	G321_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-06	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	31250832	26192131	83.81	['fastq_index_2/G321_cleaned/G321_cleaned.2.fq', 'fastq_index_2/G321_cleaned/G321_cleaned.1.fq']	G321_cleaned_raw.cram	13916805	0.95	G321_cleaned.tsv.xz	44.53	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	708371	252	0.67	0.40331	266810	0.345322	193918	0.002249	1246	0.001775	975	0.028086	22648	0.024138	15659	0.000353	74	7.5e-05	21	0.000475	173	0.000233	132
DSMC-KB-0112_cleaned	DSMC-KB-0112_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	7358128	6331902	86.05	['fastq_index_1/DSMC-KB-0112_cleaned/DSMC-KB-0112_cleaned.1.fq', 'fastq_index_1/DSMC-KB-0112_cleaned/DSMC-KB-0112_cleaned.2.fq']	DSMC-KB-0112_cleaned_raw.cram	3470119	0.95	DSMC-KB-0112_cleaned.tsv.xz	47.16	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	418515	158	0.56	0.281757	158618	0.230392	118111	0.001676	766	0.0012	604	0.028766	16576	0.02269	12037	0.000335	49	1.7e-05	10	0.000446	113	0.000179	82
R215-0_cleaned	R215-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-13	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	20636120	17900616	86.74	['fastq_index_2/R215-0_cleaned/R215-0_cleaned.1.fq', 'fastq_index_2/R215-0_cleaned/R215-0_cleaned.2.fq']	R215-0_cleaned_raw.cram	9600424	0.95	R215-0_cleaned.tsv.xz	46.52	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	327032	114	0.41	0.227589	117658	0.173426	86329	0.001033	484	0.000801	384	0.022762	9747	0.017232	6951	0.000277	54	6e-06	6	0.00035	109	0.000199	65
SSV-KB-0009_cleaned	SSV-KB-0009_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	11885698	10299029	86.65	['fastq_index_3/SSV-KB-0009_cleaned/SSV-KB-0009_cleaned.2.fq', 'fastq_index_3/SSV-KB-0009_cleaned/SSV-KB-0009_cleaned.1.fq']	SSV-KB-0009_cleaned_raw.cram	5640732	0.95	SSV-KB-0009_cleaned.tsv.xz	47.46	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	543153	211	0.67	0.315837	199393	0.280825	146277	0.001601	881	0.00128	671	0.032344	19422	0.027284	13900	0.000328	46	4.8e-05	7	0.000268	124	0.000166	89
S0236_cleaned	S0236_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	40001712	35822200	89.55	['fastq_index_3/S0236_cleaned/S0236_cleaned.2.fq', 'fastq_index_3/S0236_cleaned/S0236_cleaned.1.fq']	S0236_cleaned_raw.cram	19168081	0.95	S0236_cleaned.tsv.xz	47.92	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	459021	168	0.58	0.264657	157636	0.227464	122876	0.001177	727	0.000836	580	0.033598	17841	0.02734	13103	0.000366	50	1e-06	7	0.000552	125	0.000251	91
SNUH-KB-0030_cleaned	SNUH-KB-0030_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	39334690	35458415	90.15	['fastq_index_3/SNUH-KB-0030_cleaned/SNUH-KB-0030_cleaned.2.fq', 'fastq_index_3/SNUH-KB-0030_cleaned/SNUH-KB-0030_cleaned.1.fq']	SNUH-KB-0030_cleaned_raw.cram	18953201	0.95	SNUH-KB-0030_cleaned.tsv.xz	48.18	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	588058	212	0.63	0.330854	213472	0.288444	156132	0.00178	875	0.001464	696	0.030284	20107	0.024963	14162	0.000383	58	0.0	4	0.000544	159	0.00018	113
R54-0_cleaned	R54-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	39155040	35075664	89.58	['fastq_index_4/R54-0_cleaned/R54-0_cleaned.2.fq', 'fastq_index_4/R54-0_cleaned/R54-0_cleaned.1.fq']	R54-0_cleaned_raw.cram	18849685	0.95	R54-0_cleaned.tsv.xz	48.14	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	363495	123	0.71	0.285309	125922	0.256639	96987	0.001313	534	0.000952	425	0.044112	12072	0.041502	9351	0.000525	49	2e-06	5	0.000457	108	0.000327	72
DMN_70_cleaned	DMN_70_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	16047100	13390997	83.45	['fastq_index_1/DMN_70_cleaned/DMN_70_cleaned.2.fq', 'fastq_index_1/DMN_70_cleaned/DMN_70_cleaned.1.fq']	DMN_70_cleaned_raw.cram	7359678	0.95	DMN_70_cleaned.tsv.xz	45.86	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	687234	307	0.62	0.304442	254107	0.260383	190475	0.001882	1343	0.001407	1095	0.027192	23392	0.022332	16698	0.000446	62	2.3e-05	10	0.000419	162	0.000182	111
MN_BRMKID842_cleaned	MN_BRMKID842_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	26421112	24522672	92.81	['fastq_index/MN_BRMKID842_cleaned/MN_BRMKID842_cleaned.2.fq', 'fastq_index/MN_BRMKID842_cleaned/MN_BRMKID842_cleaned.1.fq']	MN_BRMKID842_cleaned_raw.cram	12903721	0.95	MN_BRMKID842_cleaned.tsv.xz	48.84	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	172628	46	0.71	0.396972	70066	0.34535	54364	0.002684	320	0.001588	251	0.033003	6494	0.028957	4813	0.001346	42	0.000183	12	0.001318	63	0.000603	42
S0317_cleaned	S0317_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	35175988	31727760	90.2	['fastq_index_3/S0317_cleaned/S0317_cleaned.1.fq', 'fastq_index_3/S0317_cleaned/S0317_cleaned.2.fq']	S0317_cleaned_raw.cram	16895116	0.95	S0317_cleaned.tsv.xz	48.03	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	561738	173	0.6	0.295169	199296	0.244521	135126	0.00143	802	0.001044	589	0.033483	18665	0.026046	12275	0.000326	55	1.7e-05	6	0.000633	160	0.000306	110
DSMC-KB-0125_cleaned	DSMC-KB-0125_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	55580320	49939643	89.85	['fastq_index_2/DSMC-KB-0125_cleaned/DSMC-KB-0125_cleaned.1.fq', 'fastq_index_2/DSMC-KB-0125_cleaned/DSMC-KB-0125_cleaned.2.fq']	DSMC-KB-0125_cleaned_raw.cram	26557860	0.95	DSMC-KB-0125_cleaned.tsv.xz	47.78	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	814035	287	0.58	0.305976	296445	0.245466	212858	0.001492	1281	0.00113	972	0.032136	28226	0.025241	19065	0.000289	78	1.3e-05	16	0.000492	199	0.000308	139
G289_cleaned	G289_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-05	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	38561192	34793530	90.23	['fastq_index_2/G289_cleaned/G289_cleaned.1.fq', 'fastq_index_2/G289_cleaned/G289_cleaned.2.fq']	G289_cleaned_raw.cram	18568461	0.95	G289_cleaned.tsv.xz	48.15	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	579765	166	0.65	0.316386	205214	0.274392	144598	0.001357	886	0.001065	643	0.034543	17483	0.02904	11905	0.000285	65	1.4e-05	7	0.000518	157	0.000299	103
S0278_cleaned	S0278_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	40491036	36576194	90.33	['fastq_index_3/S0278_cleaned/S0278_cleaned.2.fq', 'fastq_index_3/S0278_cleaned/S0278_cleaned.1.fq']	S0278_cleaned_raw.cram	19497565	0.95	S0278_cleaned.tsv.xz	48.15	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	427191	148	0.56	0.256912	148328	0.219679	108568	0.001044	629	0.000828	494	0.035898	15863	0.029096	11289	0.000269	44	2e-06	6	0.000469	119	0.000251	77
control_D44_cleaned	control_D44_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-18	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	14858192	12690801	85.41	['output/fastq_index/control_D44_cleaned/control_D44_cleaned.1.fq', 'output/fastq_index/control_D44_cleaned/control_D44_cleaned.2.fq']	control_D44_cleaned_raw.cram	7001509	0.95	control_D44_cleaned.tsv.xz	47.12	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	576458	214	0.64	0.310217	214460	0.272182	157492	0.002422	947	0.001394	737	0.032185	20316	0.027605	14443	0.000629	54	7e-06	12	0.000598	153	0.000126	112
G245_cleaned	G245_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-05	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	28459482	25547942	89.77	['fastq_index_2/G245_cleaned/G245_cleaned.1.fq', 'fastq_index_2/G245_cleaned/G245_cleaned.2.fq']	G245_cleaned_raw.cram	13699091	0.95	G245_cleaned.tsv.xz	48.14	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	720902	226	0.58	0.290486	250044	0.238563	176721	0.001476	1069	0.001062	824	0.036005	23203	0.029443	15944	0.00015	41	0.0	3	0.000476	158	0.000264	114
G358_cleaned	G358_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	47899392	43848589	91.54	['fastq_index_4/G358_cleaned/G358_cleaned.1.fq', 'fastq_index_4/G358_cleaned/G358_cleaned.2.fq']	G358_cleaned_raw.cram	23313799	0.95	G358_cleaned.tsv.xz	48.67	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	384521	100	0.62	0.273985	134986	0.236864	105575	0.001473	562	0.00098	459	0.043792	14061	0.03582	10503	0.000601	44	1e-06	6	0.000679	116	0.000341	91
SNUH-KB-0166_cleaned	SNUH-KB-0166_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	14017232	12051786	85.98	['fastq_index_3/SNUH-KB-0166_cleaned/SNUH-KB-0166_cleaned.1.fq', 'fastq_index_3/SNUH-KB-0166_cleaned/SNUH-KB-0166_cleaned.2.fq']	SNUH-KB-0166_cleaned_raw.cram	6580289	0.95	SNUH-KB-0166_cleaned.tsv.xz	46.94	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	701529	266	0.61	0.293859	247759	0.24625	180838	0.001989	1153	0.001572	905	0.024978	24613	0.020629	17331	0.000298	51	9e-06	3	0.000326	164	0.000121	111
DSM00238_cleaned	DSM00238_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-21	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	35107338	30987631	88.27	['output/fastq_index/DSM00238_cleaned/DSM00238_cleaned.1.fq', 'output/fastq_index/DSM00238_cleaned/DSM00238_cleaned.2.fq']	DSM00238_cleaned_raw.cram	16588613	0.95	DSM00238_cleaned.tsv.xz	47.25	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	988908	321	0.59	0.302858	340524	0.249864	240409	0.001645	1559	0.001271	1218	0.025885	32203	0.020658	21863	0.000331	70	2.8e-05	11	0.000417	216	0.000197	149
MN_61_cleaned	MN_61_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	17474164	15264311	87.35	['fastq_index/MN_61_cleaned/MN_61_cleaned.2.fq', 'fastq_index/MN_61_cleaned/MN_61_cleaned.1.fq']	MN_61_cleaned_raw.cram	8352202	0.95	MN_61_cleaned.tsv.xz	47.8	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	426582	152	0.61	0.29965	158931	0.247505	110102	0.00157	709	0.00125	526	0.034421	15957	0.024876	10178	0.000334	35	4.1e-05	4	0.000545	122	0.000275	87
DSMC-KB-0064_cleaned	DSMC-KB-0064_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-23	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	14272956	12658185	88.69	['output/fastq_index/DSMC-KB-0064_cleaned/DSMC-KB-0064_cleaned.1.fq', 'output/fastq_index/DSMC-KB-0064_cleaned/DSMC-KB-0064_cleaned.2.fq']	DSMC-KB-0064_cleaned_raw.cram	6873429	0.95	DSMC-KB-0064_cleaned.tsv.xz	48.16	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	327161	122	0.64	0.319821	126088	0.277947	98572	0.002235	551	0.001154	447	0.032919	11807	0.02703	9033	0.001226	56	1.7e-05	10	0.000665	103	0.000316	71
R23-0_cleaned	R23-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	28996728	25364246	87.47	['fastq_index_4/R23-0_cleaned/R23-0_cleaned.2.fq', 'fastq_index_4/R23-0_cleaned/R23-0_cleaned.1.fq']	R23-0_cleaned_raw.cram	13638453	0.95	R23-0_cleaned.tsv.xz	47.03	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	741681	300	0.65	0.321332	287303	0.272191	207874	0.001501	1307	0.001164	1021	0.030191	24496	0.024258	17005	0.000292	73	2.6e-05	13	0.000514	182	0.000269	120
G438_cleaned	G438_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	27642146	24767403	89.6	['fastq_index/G438_cleaned/G438_cleaned.1.fq', 'fastq_index/G438_cleaned/G438_cleaned.2.fq']	G438_cleaned_raw.cram	13263509	0.95	G438_cleaned.tsv.xz	47.98	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	159802	65	0.58	0.346365	63877	0.26382	51158	0.00168	258	0.001323	214	0.064453	5972	0.039381	4214	0.000158	26	0.0	4	0.000436	53	0.000344	39
SSV-KB-0032_cleaned	SSV-KB-0032_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	12164084	10832630	89.05	['fastq_index_3/SSV-KB-0032_cleaned/SSV-KB-0032_cleaned.2.fq', 'fastq_index_3/SSV-KB-0032_cleaned/SSV-KB-0032_cleaned.1.fq']	SSV-KB-0032_cleaned_raw.cram	5856120	0.95	SSV-KB-0032_cleaned.tsv.xz	48.14	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	363797	113	0.61	0.295635	126993	0.248912	91731	0.001428	558	0.000985	404	0.036768	12094	0.028848	8340	0.000476	44	0.0	1	0.000558	104	0.000299	70
DSMC-KB-0041_cleaned	DSMC-KB-0041_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-23	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	73249856	62867694	85.83	['output/fastq_index/DSMC-KB-0041_cleaned/DSMC-KB-0041_cleaned.1.fq', 'output/fastq_index/DSMC-KB-0041_cleaned/DSMC-KB-0041_cleaned.2.fq']	DSMC-KB-0041_cleaned_raw.cram	33719492	0.95	DSMC-KB-0041_cleaned.tsv.xz	46.03	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	1043652	364	0.61	0.296797	374242	0.249635	264130	0.001478	1665	0.001251	1309	0.028876	34611	0.023166	23397	0.000203	75	3e-05	22	0.000306	192	0.000113	135
DSM00273_cleaned	DSM00273_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-21	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	17055884	15520006	91.0	['output/fastq_index/DSM00273_cleaned/DSM00273_cleaned.1.fq', 'output/fastq_index/DSM00273_cleaned/DSM00273_cleaned.2.fq']	DSM00273_cleaned_raw.cram	8192707	0.95	DSM00273_cleaned.tsv.xz	48.03	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	404884	184	0.59	0.256598	151205	0.219994	111828	0.001143	677	0.000921	538	0.037517	15635	0.030443	10926	9.2e-05	43	3e-06	5	0.000498	137	0.000354	94
R166-0_cleaned	R166-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	31950586	28791363	90.11	['fastq_index_4/R166-0_cleaned/R166-0_cleaned.1.fq', 'fastq_index_4/R166-0_cleaned/R166-0_cleaned.2.fq']	R166-0_cleaned_raw.cram	15317516	0.95	R166-0_cleaned.tsv.xz	47.94	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	357486	133	0.67	0.288469	130784	0.257136	103948	0.001065	587	0.000898	476	0.043837	14654	0.037503	11300	0.000204	44	2e-06	5	0.000583	111	0.00031	79
control_D36_cleaned	control_D36_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-18	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	4002882	909956	22.73	['output/fastq_index/control_D36_cleaned/control_D36_cleaned.1.fq', 'output/fastq_index/control_D36_cleaned/control_D36_cleaned.2.fq']	control_D36_cleaned_raw.cram	490080	0.95	control_D36_cleaned.tsv.xz	12.24	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	147179	65	0.53	0.249485	57938	0.209575	41471	0.001089	273	0.000851	194	0.015275	5767	0.012415	3915	0.00014	23	1e-06	1	0.000352	47	0.000275	32
DSMC-KB-0188_cleaned	DSMC-KB-0188_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-04	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	23463870	20942829	89.26	['fastq_index_2/DSMC-KB-0188_cleaned/DSMC-KB-0188_cleaned.2.fq', 'fastq_index_2/DSMC-KB-0188_cleaned/DSMC-KB-0188_cleaned.1.fq']	DSMC-KB-0188_cleaned_raw.cram	11145232	0.95	DSMC-KB-0188_cleaned.tsv.xz	47.5	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	459761	182	0.63	0.355875	175445	0.300339	123594	0.001249	806	0.001086	590	0.021888	16436	0.018305	10883	0.000145	66	9e-06	11	0.000355	135	0.000276	93
R31-0_cleaned	R31-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	24138044	21659236	89.73	['fastq_index_4/R31-0_cleaned/R31-0_cleaned.1.fq', 'fastq_index_4/R31-0_cleaned/R31-0_cleaned.2.fq']	R31-0_cleaned_raw.cram	11665506	0.95	R31-0_cleaned.tsv.xz	48.33	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	510864	161	0.63	0.316956	176392	0.266087	123149	0.001743	760	0.001247	581	0.028119	16614	0.022522	11411	0.000558	43	1.4e-05	4	0.000645	148	0.00032	96
SNUH-KB-0095_cleaned	SNUH-KB-0095_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	37050052	33224657	89.68	['fastq_index_3/SNUH-KB-0095_cleaned/SNUH-KB-0095_cleaned.1.fq', 'fastq_index_3/SNUH-KB-0095_cleaned/SNUH-KB-0095_cleaned.2.fq']	SNUH-KB-0095_cleaned_raw.cram	17795210	0.95	SNUH-KB-0095_cleaned.tsv.xz	48.03	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	537492	194	0.63	0.294499	196146	0.251803	143722	0.001561	871	0.001149	667	0.043425	19789	0.035304	13685	0.000368	48	7e-06	4	0.000733	144	0.000324	105
BRM00111_cleaned	BRM00111_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-17	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	23655556	20169578	85.26	['output/fastq_index/BRM00111_cleaned/BRM00111_cleaned.2.fq', 'output/fastq_index/BRM00111_cleaned/BRM00111_cleaned.1.fq']	BRM00111_cleaned_raw.cram	8034909	0.95	BRM00111_cleaned.tsv.xz	33.97	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	309102	142	0.69	0.35828	125785	0.313417	96126	0.001517	572	0.001278	440	0.039869	11074	0.036005	8191	0.000505	69	0.000122	11	0.000809	115	0.000571	76
R52-0_cleaned	R52-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	25050810	22058476	88.05	['fastq_index_4/R52-0_cleaned/R52-0_cleaned.1.fq', 'fastq_index_4/R52-0_cleaned/R52-0_cleaned.2.fq']	R52-0_cleaned_raw.cram	11917432	0.95	R52-0_cleaned.tsv.xz	47.57	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	737854	247	0.61	0.312318	263068	0.260958	194197	0.001856	1167	0.001315	938	0.026939	25735	0.021703	18599	0.000501	53	1.8e-05	3	0.00054	186	0.000257	130
DSMC-KB-0200_cleaned	DSMC-KB-0200_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	17470644	14750594	84.43	['fastq_index_1/DSMC-KB-0200_cleaned/DSMC-KB-0200_cleaned.1.fq', 'fastq_index_1/DSMC-KB-0200_cleaned/DSMC-KB-0200_cleaned.2.fq']	DSMC-KB-0200_cleaned_raw.cram	8049561	0.95	DSMC-KB-0200_cleaned.tsv.xz	46.07	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	762279	330	0.59	0.302344	275121	0.251349	199787	0.001734	1346	0.001386	1072	0.02959	25536	0.023308	17609	0.000298	48	3.3e-05	5	0.000283	154	0.000156	115
DSMC-KB-0127_cleaned	DSMC-KB-0127_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	52125820	47180300	90.51	['fastq_index_2/DSMC-KB-0127_cleaned/DSMC-KB-0127_cleaned.2.fq', 'fastq_index_2/DSMC-KB-0127_cleaned/DSMC-KB-0127_cleaned.1.fq']	DSMC-KB-0127_cleaned_raw.cram	25166211	0.95	DSMC-KB-0127_cleaned.tsv.xz	48.28	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	417908	203	0.68	0.295485	157826	0.260348	121323	0.001741	763	0.001209	609	0.037607	16464	0.033107	11657	0.001491	64	4.8e-05	11	0.000718	117	0.000351	77
DSMC-KB-0009_cleaned	DSMC-KB-0009_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-22	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	10360534	8657957	83.57	['output/fastq_index/DSMC-KB-0009_cleaned/DSMC-KB-0009_cleaned.1.fq', 'output/fastq_index/DSMC-KB-0009_cleaned/DSMC-KB-0009_cleaned.2.fq']	DSMC-KB-0009_cleaned_raw.cram	4826726	0.95	DSMC-KB-0009_cleaned.tsv.xz	46.59	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	297489	115	0.61	0.271994	115069	0.231363	81902	0.001391	494	0.001099	368	0.038081	10429	0.028575	6990	0.000303	40	6.1e-05	6	0.000672	105	0.000308	73
R118-0_cleaned	R118-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	21491608	19366701	90.11	['fastq_index/R118-0_cleaned/R118-0_cleaned.1.fq', 'fastq_index/R118-0_cleaned/R118-0_cleaned.2.fq']	R118-0_cleaned_raw.cram	10484418	0.95	R118-0_cleaned.tsv.xz	48.78	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	406386	181	0.68	0.322523	158880	0.282141	117493	0.001434	725	0.001207	558	0.047191	14867	0.038911	10609	0.000167	54	0.0	7	0.000709	126	0.000496	91
G296_cleaned	G296_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-06	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	27098876	24172185	89.2	['fastq_index_2/G296_cleaned/G296_cleaned.1.fq', 'fastq_index_2/G296_cleaned/G296_cleaned.2.fq']	G296_cleaned_raw.cram	12951466	0.95	G296_cleaned.tsv.xz	47.79	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	614474	194	0.57	0.288398	216566	0.233528	155550	0.001312	969	0.000947	743	0.034619	20143	0.025139	14085	0.000257	48	3e-06	7	0.00054	166	0.000286	123
S0220_cleaned	S0220_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	42695882	37601852	88.07	['fastq_index_3/S0220_cleaned/S0220_cleaned.1.fq', 'fastq_index_3/S0220_cleaned/S0220_cleaned.2.fq']	S0220_cleaned_raw.cram	20012677	0.95	S0220_cleaned.tsv.xz	46.87	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	636696	234	0.6	0.281658	229197	0.232702	165502	0.001472	990	0.000965	756	0.035596	22000	0.02667	15061	0.000326	56	2e-06	6	0.000502	181	0.00028	128
igAN_BRMKID798_cleaned	igAN_BRMKID798_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	13812932	12182136	88.19	['fastq_index/igAN_BRMKID798_cleaned/igAN_BRMKID798_cleaned.2.fq', 'fastq_index/igAN_BRMKID798_cleaned/igAN_BRMKID798_cleaned.1.fq']	igAN_BRMKID798_cleaned_raw.cram	6655829	0.95	igAN_BRMKID798_cleaned.tsv.xz	48.19	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	263291	89	0.67	0.316712	98341	0.277921	74328	0.001469	427	0.001158	328	0.03189	10431	0.02835	7501	0.000434	50	5e-06	4	0.000558	80	0.00023	54
R39-0_cleaned	R39-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	36579944	33231312	90.85	['fastq_index_4/R39-0_cleaned/R39-0_cleaned.2.fq', 'fastq_index_4/R39-0_cleaned/R39-0_cleaned.1.fq']	R39-0_cleaned_raw.cram	17855098	0.95	R39-0_cleaned.tsv.xz	48.81	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	468298	167	0.63	0.291506	175892	0.251862	134298	0.001325	794	0.001029	632	0.041564	17732	0.034834	13246	0.000274	54	3e-06	7	0.000566	133	0.000336	89
DSMC-KB-0135_cleaned	DSMC-KB-0135_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-04	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	63443296	56303357	88.75	['fastq_index_2/DSMC-KB-0135_cleaned/DSMC-KB-0135_cleaned.2.fq', 'fastq_index_2/DSMC-KB-0135_cleaned/DSMC-KB-0135_cleaned.1.fq']	DSMC-KB-0135_cleaned_raw.cram	30108066	0.95	DSMC-KB-0135_cleaned.tsv.xz	47.46	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	680487	271	0.58	0.284507	256768	0.24258	191991	0.001161	1144	0.000979	897	0.036062	24144	0.029542	16714	0.00028	62	5e-06	11	0.000457	164	0.000356	122
igAN_BRMKID789_cleaned	igAN_BRMKID789_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	13941080	12697382	91.08	['fastq_index/igAN_BRMKID789_cleaned/igAN_BRMKID789_cleaned.2.fq', 'fastq_index/igAN_BRMKID789_cleaned/igAN_BRMKID789_cleaned.1.fq']	igAN_BRMKID789_cleaned_raw.cram	6811327	0.95	igAN_BRMKID789_cleaned.tsv.xz	48.86	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	218556	81	0.65	0.317507	86408	0.276134	64211	0.001392	386	0.001086	280	0.040013	7378	0.032808	5257	0.000335	38	9e-06	8	0.000712	78	0.000395	49
SSV-KB-0069_cleaned	SSV-KB-0069_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	42607892	38508397	90.38	['fastq_index_3/SSV-KB-0069_cleaned/SSV-KB-0069_cleaned.1.fq', 'fastq_index_3/SSV-KB-0069_cleaned/SSV-KB-0069_cleaned.2.fq']	SSV-KB-0069_cleaned_raw.cram	20542811	0.95	SSV-KB-0069_cleaned.tsv.xz	48.21	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	608364	257	0.64	0.298214	222263	0.257768	161654	0.001336	978	0.001138	759	0.039427	23088	0.032049	16096	0.000326	61	5.9e-05	6	0.000661	162	0.000327	115
DSMC-KB-0142_cleaned	DSMC-KB-0142_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-04	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	35523850	31738060	89.34	['fastq_index_2/DSMC-KB-0142_cleaned/DSMC-KB-0142_cleaned.2.fq', 'fastq_index_2/DSMC-KB-0142_cleaned/DSMC-KB-0142_cleaned.1.fq']	DSMC-KB-0142_cleaned_raw.cram	16965678	0.95	DSMC-KB-0142_cleaned.tsv.xz	47.76	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	561900	217	0.48	0.229901	200991	0.192756	157411	0.00114	889	0.000844	718	0.02537	19587	0.022169	14709	0.000284	69	1.4e-05	14	0.000401	163	0.000243	120
G424_cleaned	G424_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	31354706	28325618	90.34	['fastq_index/G424_cleaned/G424_cleaned.2.fq', 'fastq_index/G424_cleaned/G424_cleaned.1.fq']	G424_cleaned_raw.cram	15127137	0.95	G424_cleaned.tsv.xz	48.25	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	175076	90	0.72	0.411912	72199	0.360229	54627	0.002059	369	0.001486	266	0.020738	7123	0.018559	5205	0.001028	58	0.000196	11	0.00148	76	0.000869	48
DSMC-KB-0014_cleaned	DSMC-KB-0014_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-22	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	16230500	14299172	88.1	['output/fastq_index/DSMC-KB-0014_cleaned/DSMC-KB-0014_cleaned.1.fq', 'output/fastq_index/DSMC-KB-0014_cleaned/DSMC-KB-0014_cleaned.2.fq']	DSMC-KB-0014_cleaned_raw.cram	7797104	0.95	DSMC-KB-0014_cleaned.tsv.xz	48.04	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	552165	202	0.62	0.289924	196754	0.248457	143167	0.001463	866	0.001086	689	0.035797	21437	0.02849	15458	0.000288	50	2.2e-05	8	0.000512	146	0.000244	104
control_D47_cleaned	control_D47_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-18	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	15136032	13318136	87.99	['output/fastq_index/control_D47_cleaned/control_D47_cleaned.2.fq', 'output/fastq_index/control_D47_cleaned/control_D47_cleaned.1.fq']	control_D47_cleaned_raw.cram	7262078	0.95	control_D47_cleaned.tsv.xz	47.98	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	429923	162	0.59	0.275464	154662	0.225372	105436	0.001548	637	0.001166	466	0.034633	15722	0.025144	10453	0.000354	44	7.5e-05	4	0.000484	110	0.000266	81
S0088_cleaned	S0088_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	40519336	36458759	89.98	['fastq_index_4/S0088_cleaned/S0088_cleaned.1.fq', 'fastq_index_4/S0088_cleaned/S0088_cleaned.2.fq']	S0088_cleaned_raw.cram	19581051	0.95	S0088_cleaned.tsv.xz	48.33	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	563919	202	0.76	0.332562	210763	0.301294	154854	0.001601	897	0.001486	683	0.047282	20692	0.043361	14683	0.000117	53	5.2e-05	8	0.000432	155	0.000337	118
BRMH-KB-0008_cleaned	BRMH-KB-0008_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-17	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	19221052	17529607	91.2	['output/fastq_index/BRMH-KB-0008_cleaned/BRMH-KB-0008_cleaned.1.fq', 'output/fastq_index/BRMH-KB-0008_cleaned/BRMH-KB-0008_cleaned.2.fq']	BRMH-KB-0008_cleaned_raw.cram	9343312	0.95	BRMH-KB-0008_cleaned.tsv.xz	48.61	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	292425	128	0.63	0.34319	108941	0.293548	81319	0.001435	487	0.00117	376	0.033358	10645	0.026641	7543	0.00021	49	5e-06	6	0.000704	94	0.000423	62
D63_cleaned	D63_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-20	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	28704178	24857878	86.6	['output/fastq_index/D63_cleaned/D63_cleaned.1.fq', 'output/fastq_index/D63_cleaned/D63_cleaned.2.fq']	D63_cleaned_raw.cram	13445318	0.95	D63_cleaned.tsv.xz	46.84	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	877951	322	0.62	0.311271	310579	0.261582	218173	0.00161	1446	0.001289	1123	0.029263	29141	0.023336	19481	0.000345	43	1.9e-05	4	0.000399	193	0.000183	134
SNUH-KB-0066_cleaned	SNUH-KB-0066_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	37334442	32997433	88.38	['fastq_index_3/SNUH-KB-0066_cleaned/SNUH-KB-0066_cleaned.1.fq', 'fastq_index_3/SNUH-KB-0066_cleaned/SNUH-KB-0066_cleaned.2.fq']	SNUH-KB-0066_cleaned_raw.cram	17772182	0.95	SNUH-KB-0066_cleaned.tsv.xz	47.6	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	895511	296	0.66	0.347409	310080	0.302141	224244	0.001764	1405	0.001425	1126	0.028024	27581	0.023076	19610	0.000212	54	2.7e-05	9	0.000506	183	0.000271	139
control_1010_cleaned	control_1010_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-17	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	15238682	12667029	83.12	['output/fastq_index/control_1010_cleaned/control_1010_cleaned.1.fq', 'output/fastq_index/control_1010_cleaned/control_1010_cleaned.2.fq']	control_1010_cleaned_raw.cram	7032217	0.95	control_1010_cleaned.tsv.xz	46.15	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	261844	99	0.68	0.334664	100308	0.299849	69557	0.001479	442	0.001199	322	0.030081	9452	0.026309	6038	0.000562	34	1e-06	3	0.000199	83	7.7e-05	63
R358-0_cleaned	R358-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	19321632	17047659	88.23	['fastq_index_4/R358-0_cleaned/R358-0_cleaned.2.fq', 'fastq_index_4/R358-0_cleaned/R358-0_cleaned.1.fq']	R358-0_cleaned_raw.cram	9197386	0.95	R358-0_cleaned.tsv.xz	47.6	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	482619	160	0.64	0.296467	173199	0.256594	136265	0.001773	793	0.001263	641	0.036895	16429	0.029555	12473	0.000787	56	1.4e-05	10	0.000643	124	0.000331	85
DSMC-KB-0190_cleaned	DSMC-KB-0190_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-04	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	53106110	46364193	87.3	['fastq_index_2/DSMC-KB-0190_cleaned/DSMC-KB-0190_cleaned.1.fq', 'fastq_index_2/DSMC-KB-0190_cleaned/DSMC-KB-0190_cleaned.2.fq']	DSMC-KB-0190_cleaned_raw.cram	24723067	0.95	DSMC-KB-0190_cleaned.tsv.xz	46.55	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	861954	242	0.55	0.259003	288770	0.214983	202781	0.001367	1216	0.001073	920	0.024094	26616	0.020114	18131	0.000247	61	3e-06	5	0.000399	222	0.000181	146
D132_cleaned	D132_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-18	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	25675636	22222413	86.55	['output/fastq_index/D132_cleaned/D132_cleaned.2.fq', 'output/fastq_index/D132_cleaned/D132_cleaned.1.fq']	D132_cleaned_raw.cram	12036076	0.95	D132_cleaned.tsv.xz	46.88	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	655799	279	0.63	0.311402	234767	0.267815	165644	0.001686	1056	0.001482	837	0.034424	23608	0.02833	16507	0.000435	47	1e-05	7	0.000425	144	0.000117	96
DSMC-KB-0088_cleaned	DSMC-KB-0088_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	20332920	17835067	87.72	['fastq_index_1/DSMC-KB-0088_cleaned/DSMC-KB-0088_cleaned.1.fq', 'fastq_index_1/DSMC-KB-0088_cleaned/DSMC-KB-0088_cleaned.2.fq']	DSMC-KB-0088_cleaned_raw.cram	7346246	0.95	DSMC-KB-0088_cleaned.tsv.xz	36.13	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	453256	252	0.71	0.4348	172143	0.369204	129687	0.002601	806	0.001499	648	0.017311	18921	0.014535	14031	0.001051	49	9.9e-05	6	0.000965	126	0.000537	94
DSMC-KB-0008_cleaned	DSMC-KB-0008_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-22	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	20897024	18127832	86.75	['output/fastq_index/DSMC-KB-0008_cleaned/DSMC-KB-0008_cleaned.2.fq', 'output/fastq_index/DSMC-KB-0008_cleaned/DSMC-KB-0008_cleaned.1.fq']	DSMC-KB-0008_cleaned_raw.cram	9909196	0.95	DSMC-KB-0008_cleaned.tsv.xz	47.42	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	720294	257	0.59	0.286822	264095	0.238321	190258	0.001677	1192	0.001148	937	0.031033	25553	0.024009	18017	0.0006	66	2e-05	15	0.000472	159	0.000182	112
R275-0_cleaned	R275-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	21993514	19174128	87.18	['fastq_index_2/R275-0_cleaned/R275-0_cleaned.2.fq', 'fastq_index_2/R275-0_cleaned/R275-0_cleaned.1.fq']	R275-0_cleaned_raw.cram	10311867	0.95	R275-0_cleaned.tsv.xz	46.89	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	587720	220	0.65	0.32028	207285	0.279687	151792	0.001657	939	0.001315	742	0.03168	19757	0.027458	14112	0.000272	51	1e-06	2	0.000456	140	0.00021	99
igAN_172_cleaned	igAN_172_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	18644640	15847593	85.0	['fastq_index/igAN_172_cleaned/igAN_172_cleaned.1.fq', 'fastq_index/igAN_172_cleaned/igAN_172_cleaned.2.fq']	igAN_172_cleaned_raw.cram	8717551	0.95	igAN_172_cleaned.tsv.xz	46.76	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	511095	172	0.58	0.268987	187960	0.225306	139762	0.001746	837	0.001507	658	0.030117	20211	0.024379	14528	0.000349	40	8.8e-05	5	0.000383	128	0.000181	93
R6-0_cleaned	R6-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	33492896	30354831	90.63	['fastq_index_4/R6-0_cleaned/R6-0_cleaned.2.fq', 'fastq_index_4/R6-0_cleaned/R6-0_cleaned.1.fq']	R6-0_cleaned_raw.cram	16260969	0.95	R6-0_cleaned.tsv.xz	48.55	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	325669	132	0.66	0.297552	123704	0.261187	98892	0.001465	521	0.00094	432	0.038297	11670	0.032602	8961	0.000676	61	3.3e-05	11	0.00074	111	0.000424	75
DSMC-KB-0160_cleaned	DSMC-KB-0160_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-04	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	84757862	75876249	89.52	['fastq_index_2/DSMC-KB-0160_cleaned/DSMC-KB-0160_cleaned.2.fq', 'fastq_index_2/DSMC-KB-0160_cleaned/DSMC-KB-0160_cleaned.1.fq']	DSMC-KB-0160_cleaned_raw.cram	30404559	0.95	DSMC-KB-0160_cleaned.tsv.xz	35.87	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	488470	194	0.75	0.404298	183538	0.361816	142647	0.002174	773	0.001487	632	0.023127	18262	0.01953	13437	0.001268	72	0.000216	13	0.001336	141	0.000641	96
S0065_cleaned	S0065_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	58634238	52695464	89.87	['fastq_index_4/S0065_cleaned/S0065_cleaned.2.fq', 'fastq_index_4/S0065_cleaned/S0065_cleaned.1.fq']	S0065_cleaned_raw.cram	28132997	0.95	S0065_cleaned.tsv.xz	47.98	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	904126	291	0.61	0.290665	313105	0.243696	221962	0.00154	1426	0.001149	1089	0.029034	29707	0.022983	20413	0.000239	64	1e-06	11	0.000476	236	0.000259	169
DSMC-KB-0096_cleaned	DSMC-KB-0096_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	36242440	32498347	89.67	['fastq_index_2/DSMC-KB-0096_cleaned/DSMC-KB-0096_cleaned.2.fq', 'fastq_index_2/DSMC-KB-0096_cleaned/DSMC-KB-0096_cleaned.1.fq']	DSMC-KB-0096_cleaned_raw.cram	17385591	0.95	DSMC-KB-0096_cleaned.tsv.xz	47.97	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	727932	297	0.6	0.271283	262633	0.228328	186854	0.001494	1125	0.001088	880	0.029752	25988	0.02309	18035	0.000365	57	3.9e-05	6	0.000466	177	0.000204	120
S0295_cleaned	S0295_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	32194420	27519837	85.48	['fastq_index_3/S0295_cleaned/S0295_cleaned.1.fq', 'fastq_index_3/S0295_cleaned/S0295_cleaned.2.fq']	S0295_cleaned_raw.cram	14747568	0.95	S0295_cleaned.tsv.xz	45.81	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	886702	301	0.56	0.280516	304357	0.230112	219853	0.001498	1413	0.001098	1101	0.028283	29217	0.022833	20811	0.000201	51	2e-06	5	0.000471	192	0.0002	144
G457_cleaned	G457_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	40451298	36275928	89.68	['fastq_index_4/G457_cleaned/G457_cleaned.2.fq', 'fastq_index_4/G457_cleaned/G457_cleaned.1.fq']	G457_cleaned_raw.cram	19414624	0.95	G457_cleaned.tsv.xz	48.0	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	822501	263	0.61	0.306732	291506	0.255892	211773	0.00139	1264	0.001061	996	0.033704	28483	0.025982	19813	0.000241	49	1e-06	7	0.000418	199	0.000249	146
igAN_180_cleaned	igAN_180_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	17618934	15484604	87.89	['fastq_index/igAN_180_cleaned/igAN_180_cleaned.1.fq', 'fastq_index/igAN_180_cleaned/igAN_180_cleaned.2.fq']	igAN_180_cleaned_raw.cram	8469494	0.95	igAN_180_cleaned.tsv.xz	48.07	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	359447	126	0.58	0.258171	125388	0.21483	90955	0.001662	529	0.001279	428	0.03375	14209	0.025106	9967	0.00051	29	0.000146	1	0.000604	94	0.000291	73
R342-0_cleaned	R342-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	29436498	25953028	88.17	['fastq_index_4/R342-0_cleaned/R342-0_cleaned.1.fq', 'fastq_index_4/R342-0_cleaned/R342-0_cleaned.2.fq']	R342-0_cleaned_raw.cram	14023078	0.95	R342-0_cleaned.tsv.xz	47.64	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	361686	134	0.64	0.295604	134350	0.255206	107339	0.001451	633	0.001096	515	0.022995	10244	0.019346	8180	0.00031	76	1.1e-05	13	0.000452	121	0.00022	81
S0231_cleaned	S0231_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-04	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	42606396	35096604	82.37	['fastq_index_4/S0231_cleaned/S0231_cleaned.2.fq', 'fastq_index_4/S0231_cleaned/S0231_cleaned.1.fq']	S0231_cleaned_raw.cram	18834456	0.95	S0231_cleaned.tsv.xz	44.21	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	955989	325	0.57	0.273353	332158	0.221132	239176	0.001389	1571	0.001091	1226	0.02657	31823	0.02079	22778	0.000207	62	1.9e-05	6	0.0004	211	0.000212	154
SSV-KB-0075_cleaned	SSV-KB-0075_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	43816066	39279125	89.65	['fastq_index_3/SSV-KB-0075_cleaned/SSV-KB-0075_cleaned.1.fq', 'fastq_index_3/SSV-KB-0075_cleaned/SSV-KB-0075_cleaned.2.fq']	SSV-KB-0075_cleaned_raw.cram	21007806	0.95	SSV-KB-0075_cleaned.tsv.xz	47.95	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	925349	348	0.61	0.316556	329620	0.26254	238125	0.001397	1381	0.001106	1099	0.029867	31717	0.024219	21783	0.000216	66	1e-06	8	0.000464	220	0.000228	162
R33-0_cleaned	R33-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	41184604	36268400	88.06	['fastq_index_4/R33-0_cleaned/R33-0_cleaned.2.fq', 'fastq_index_4/R33-0_cleaned/R33-0_cleaned.1.fq']	R33-0_cleaned_raw.cram	19643648	0.95	R33-0_cleaned.tsv.xz	47.7	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	736715	280	0.63	0.327994	256423	0.280861	188398	0.001681	1260	0.001417	1031	0.022911	22469	0.019543	16423	0.000208	48	1.4e-05	9	0.000397	145	0.000254	103
BRM00090_cleaned	BRM00090_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-13	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	23481814	20831551	88.71	['fastq_index_1/BRM00090_cleaned/BRM00090_cleaned.1.fq', 'fastq_index_1/BRM00090_cleaned/BRM00090_cleaned.2.fq']	BRM00090_cleaned_raw.cram	11124690	0.95	BRM00090_cleaned.tsv.xz	47.38	2.0.22	2026-04-15	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	653238	228	0.63	0.27648	231714	0.239261	174838	0.001457	1032	0.001212	837	0.030099	22912	0.025438	16697	0.000192	62	1e-06	6	0.000445	188	0.000253	135
MN_BRMKID753_cleaned	MN_BRMKID753_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	14413420	12538752	86.99	['fastq_index/MN_BRMKID753_cleaned/MN_BRMKID753_cleaned.2.fq', 'fastq_index/MN_BRMKID753_cleaned/MN_BRMKID753_cleaned.1.fq']	MN_BRMKID753_cleaned_raw.cram	6909392	0.95	MN_BRMKID753_cleaned.tsv.xz	47.94	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	405375	120	0.62	0.343883	156085	0.28294	110014	0.001645	641	0.001274	471	0.0237	11957	0.018745	7745	0.000218	54	3e-06	12	0.000426	118	0.000242	80
DSM00276_cleaned	DSM00276_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-21	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	39416896	34124061	86.57	['output/fastq_index/DSM00276_cleaned/DSM00276_cleaned.1.fq', 'output/fastq_index/DSM00276_cleaned/DSM00276_cleaned.2.fq']	DSM00276_cleaned_raw.cram	18134765	0.95	DSM00276_cleaned.tsv.xz	46.01	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	785400	253	0.59	0.263539	267203	0.226362	194531	0.00131	1201	0.000994	958	0.028545	25119	0.024483	18178	0.000267	66	1e-06	11	0.00047	177	0.000259	123
R277-0_cleaned	R277-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	18816910	16510192	87.74	['fastq_index_2/R277-0_cleaned/R277-0_cleaned.2.fq', 'fastq_index_2/R277-0_cleaned/R277-0_cleaned.1.fq']	R277-0_cleaned_raw.cram	8877800	0.95	R277-0_cleaned.tsv.xz	47.18	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	664011	220	0.58	0.30933	233175	0.25063	171456	0.001906	1102	0.001305	874	0.025404	21655	0.020606	15725	0.000414	51	1e-06	4	0.000674	183	0.000274	129
R17-0_cleaned	R17-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	29375828	25041764	85.25	['fastq_index_4/R17-0_cleaned/R17-0_cleaned.1.fq', 'fastq_index_4/R17-0_cleaned/R17-0_cleaned.2.fq']	R17-0_cleaned_raw.cram	13539717	0.95	R17-0_cleaned.tsv.xz	46.09	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	986686	364	0.6	0.311116	339714	0.25722	246096	0.001646	1665	0.001326	1364	0.029178	30586	0.023267	21502	0.000209	42	1.4e-05	3	0.000375	168	0.000178	127
R305-0_cleaned	R305-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	26884406	22226559	82.67	['fastq_index_2/R305-0_cleaned/R305-0_cleaned.1.fq', 'fastq_index_2/R305-0_cleaned/R305-0_cleaned.2.fq']	R305-0_cleaned_raw.cram	11960079	0.95	R305-0_cleaned.tsv.xz	44.49	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	502634	169	0.68	0.343096	184762	0.298051	142078	0.001894	848	0.001506	694	0.021512	15208	0.018194	11309	0.000363	60	5e-06	7	0.000561	141	0.000305	103
R145-0_cleaned	R145-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	5339526	4546762	85.15	['fastq_index_4/R145-0_cleaned/R145-0_cleaned.1.fq', 'fastq_index_4/R145-0_cleaned/R145-0_cleaned.2.fq']	R145-0_cleaned_raw.cram	2500009	0.95	R145-0_cleaned.tsv.xz	46.82	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	252778	127	0.75	0.375357	100136	0.336894	78704	0.001971	417	0.001596	326	0.033885	10136	0.030808	7618	0.000605	48	5.9e-05	4	0.000674	90	0.000408	59
R89-0_cleaned	R89-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	35281912	30057707	85.19	['fastq_index_4/R89-0_cleaned/R89-0_cleaned.2.fq', 'fastq_index_4/R89-0_cleaned/R89-0_cleaned.1.fq']	R89-0_cleaned_raw.cram	16277276	0.95	R89-0_cleaned.tsv.xz	46.13	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	957637	336	0.67	0.337433	330923	0.29292	242688	0.001878	1562	0.001435	1270	0.024605	29106	0.020325	20972	0.00027	58	1.5e-05	8	0.0006	216	0.000317	164
R174-0_cleaned	R174-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	23397298	20916181	89.4	['fastq_index_4/R174-0_cleaned/R174-0_cleaned.2.fq', 'fastq_index_4/R174-0_cleaned/R174-0_cleaned.1.fq']	R174-0_cleaned_raw.cram	11172143	0.95	R174-0_cleaned.tsv.xz	47.75	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	366178	126	0.55	0.268979	136930	0.224009	103044	0.001099	552	0.000856	418	0.03941	13367	0.032474	9801	0.000241	34	3e-06	2	0.000523	118	0.000287	88
SSV-KB-0067_cleaned	SSV-KB-0067_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	39708344	36101542	90.92	['fastq_index_3/SSV-KB-0067_cleaned/SSV-KB-0067_cleaned.1.fq', 'fastq_index_3/SSV-KB-0067_cleaned/SSV-KB-0067_cleaned.2.fq']	SSV-KB-0067_cleaned_raw.cram	19280361	0.95	SSV-KB-0067_cleaned.tsv.xz	48.55	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	434643	227	0.75	0.320252	172836	0.294596	135462	0.001352	778	0.001239	643	0.044248	17911	0.040228	13294	0.00014	58	4.4e-05	11	0.000391	114	0.000305	80
R56-0_cleaned	R56-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	42572614	38078967	89.44	['fastq_index_4/R56-0_cleaned/R56-0_cleaned.2.fq', 'fastq_index_4/R56-0_cleaned/R56-0_cleaned.1.fq']	R56-0_cleaned_raw.cram	20585749	0.95	R56-0_cleaned.tsv.xz	48.35	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	242197	81	0.72	0.356112	98385	0.321885	81167	0.001917	434	0.001483	365	0.034436	9155	0.030321	7274	0.000723	59	0.000127	15	0.000834	95	0.000489	64
BRM00104_cleaned	BRM00104_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-17	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	48238292	43292025	89.75	['output/fastq_index/BRM00104_cleaned/BRM00104_cleaned.2.fq', 'output/fastq_index/BRM00104_cleaned/BRM00104_cleaned.1.fq']	BRM00104_cleaned_raw.cram	23058663	0.95	BRM00104_cleaned.tsv.xz	47.8	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	661220	224	0.65	0.290095	241373	0.247369	179375	0.001261	1024	0.00103	810	0.04008	23749	0.032876	16609	0.000165	74	1.5e-05	17	0.000447	176	0.000232	126
SSV00145_cleaned	SSV00145_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	38571398	33817878	87.68	['fastq_index_3/SSV00145_cleaned/SSV00145_cleaned.1.fq', 'fastq_index_3/SSV00145_cleaned/SSV00145_cleaned.2.fq']	SSV00145_cleaned_raw.cram	18124344	0.95	SSV00145_cleaned.tsv.xz	46.99	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	999475	395	0.68	0.345981	361068	0.303725	262264	0.001382	1664	0.001121	1367	0.019503	32364	0.016143	22575	0.000231	67	5e-06	11	0.000734	223	0.000413	152
DSMC-KB-0079_cleaned	DSMC-KB-0079_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-16	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	66916472	57484902	85.91	['last3fastq/DSMC-KB-0079_cleaned/DSMC-KB-0079_cleaned.2.fq', 'last3fastq/DSMC-KB-0079_cleaned/DSMC-KB-0079_cleaned.1.fq']	DSMC-KB-0079_cleaned_raw.cram	30922303	0.95	DSMC-KB-0079_cleaned.tsv.xz	46.21	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	1254174	372	0.57	0.28895	423788	0.232567	298279	0.001596	1873	0.001171	1502	0.02612	39214	0.020062	26667	0.000268	62	3.5e-05	6	0.000372	248	0.000146	174
SSV-KB-0025_cleaned	SSV-KB-0025_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	11541156	9861689	85.45	['fastq_index_3/SSV-KB-0025_cleaned/SSV-KB-0025_cleaned.2.fq', 'fastq_index_3/SSV-KB-0025_cleaned/SSV-KB-0025_cleaned.1.fq']	SSV-KB-0025_cleaned_raw.cram	5469864	0.95	SSV-KB-0025_cleaned.tsv.xz	47.39	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	439109	161	0.66	0.301886	157400	0.265054	117384	0.00138	698	0.001059	545	0.037328	16584	0.03142	12024	0.00035	47	0.0	1	0.000461	133	0.000255	96
R133-0_cleaned	R133-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-23	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	30741212	26588626	86.49	['fastq_index_4/R133-0_cleaned/R133-0_cleaned.1.fq', 'fastq_index_4/R133-0_cleaned/R133-0_cleaned.2.fq']	R133-0_cleaned_raw.cram	14423822	0.95	R133-0_cleaned.tsv.xz	46.92	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	663550	233	0.67	0.293046	228347	0.258692	171407	0.001401	1028	0.001049	802	0.027924	22990	0.0245	17120	0.000314	55	0.0	4	0.000435	163	0.000196	119
R97-0_cleaned	R97-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	40016212	35376603	88.41	['fastq_index_4/R97-0_cleaned/R97-0_cleaned.2.fq', 'fastq_index_4/R97-0_cleaned/R97-0_cleaned.1.fq']	R97-0_cleaned_raw.cram	19222412	0.95	R97-0_cleaned.tsv.xz	48.04	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	632572	214	0.63	0.340368	237117	0.280679	165093	0.00177	989	0.001424	738	0.031441	23700	0.024977	15915	0.000342	45	2.4e-05	5	0.000291	178	0.000162	127
G293_cleaned	G293_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-06	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	40060924	36309778	90.64	['fastq_index_2/G293_cleaned/G293_cleaned.2.fq', 'fastq_index_2/G293_cleaned/G293_cleaned.1.fq']	G293_cleaned_raw.cram	19166086	0.95	G293_cleaned.tsv.xz	47.84	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	377081	137	0.62	0.272262	133166	0.236286	102804	0.001308	599	0.000983	475	0.041421	14240	0.033871	10509	0.000305	50	4e-06	6	0.000511	119	0.000314	82
control_D41_cleaned	control_D41_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-18	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	12439214	10690816	85.94	['output/fastq_index/control_D41_cleaned/control_D41_cleaned.2.fq', 'output/fastq_index/control_D41_cleaned/control_D41_cleaned.1.fq']	control_D41_cleaned_raw.cram	5817608	0.95	control_D41_cleaned.tsv.xz	46.77	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	684702	259	0.55	0.295578	246230	0.239384	176820	0.001557	1192	0.001168	919	0.026564	22066	0.020868	15533	0.000263	52	2e-06	6	0.000486	198	0.000233	140
control_D46_cleaned	control_D46_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-18	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	14846776	13124583	88.4	['output/fastq_index/control_D46_cleaned/control_D46_cleaned.2.fq', 'output/fastq_index/control_D46_cleaned/control_D46_cleaned.1.fq']	control_D46_cleaned_raw.cram	7139357	0.95	control_D46_cleaned.tsv.xz	48.09	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	253032	91	0.71	0.332688	106328	0.292285	81881	0.001891	508	0.001377	396	0.041059	8570	0.033661	6201	0.000378	64	7.9e-05	15	0.000628	81	0.000255	54
R41-0_cleaned	R41-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	38517256	34701157	90.09	['fastq_index_4/R41-0_cleaned/R41-0_cleaned.2.fq', 'fastq_index_4/R41-0_cleaned/R41-0_cleaned.1.fq']	R41-0_cleaned_raw.cram	18679910	0.95	R41-0_cleaned.tsv.xz	48.5	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	364404	140	0.59	0.292799	139264	0.246274	111732	0.0013	591	0.000966	478	0.0454	14222	0.033164	10888	0.000354	63	1e-06	15	0.000464	105	0.000317	74
DMN_BRMKID788_cleaned	DMN_BRMKID788_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	20484810	15675310	76.52	['fastq_index_1/DMN_BRMKID788_cleaned/DMN_BRMKID788_cleaned.1.fq', 'fastq_index_1/DMN_BRMKID788_cleaned/DMN_BRMKID788_cleaned.2.fq']	DMN_BRMKID788_cleaned_raw.cram	8761148	0.95	DMN_BRMKID788_cleaned.tsv.xz	42.77	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	202121	67	0.74	0.393879	87485	0.362724	70107	0.0025	442	0.002095	360	0.032065	6455	0.030381	5121	0.000388	55	6e-06	15	0.000428	75	0.000256	49
G432_cleaned	G432_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	26555618	24049347	90.56	['fastq_index/G432_cleaned/G432_cleaned.1.fq', 'fastq_index/G432_cleaned/G432_cleaned.2.fq']	G432_cleaned_raw.cram	12904927	0.95	G432_cleaned.tsv.xz	48.6	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	311153	114	0.67	0.311089	112166	0.27425	87402	0.001446	489	0.001124	394	0.041256	10998	0.035586	8058	0.000346	49	0.0	5	0.000567	101	0.000371	67
N0-1_cleaned	N0-1_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	731768	570610	77.98	['fastq_index/N0-1_cleaned/N0-1_cleaned.1.fq', 'fastq_index/N0-1_cleaned/N0-1_cleaned.2.fq']	N0-1_cleaned_raw.cram	258778	0.95	N0-1_cleaned.tsv.xz	35.36	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	148760	93	0.59	0.262531	59178	0.224272	46668	0.001275	255	0.000933	204	0.023772	7375	0.019697	5609	0.000419	48	5.8e-05	5	0.000566	60	0.000328	35
MN-1_cleaned	MN-1_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	36875938	32948578	89.35	['fastq_index/MN-1_cleaned/MN-1_cleaned.1.fq', 'fastq_index/MN-1_cleaned/MN-1_cleaned.2.fq']	MN-1_cleaned_raw.cram	17913044	0.95	MN-1_cleaned.tsv.xz	48.58	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	337175	118	0.63	0.310216	126359	0.264123	94032	0.001488	586	0.00114	455	0.043848	12147	0.036816	8807	0.000334	53	2e-06	7	0.000604	103	0.000334	76
G464_cleaned	G464_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	30086340	25944909	86.23	['fastq_index/G464_cleaned/G464_cleaned.2.fq', 'fastq_index/G464_cleaned/G464_cleaned.1.fq']	G464_cleaned_raw.cram	14039517	0.95	G464_cleaned.tsv.xz	46.66	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	785658	248	0.58	0.306277	278415	0.247634	191756	0.001769	1204	0.001352	942	0.027653	25256	0.021321	16274	0.000324	48	2e-05	8	0.00046	173	0.000152	117
R289-0_cleaned	R289-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	13131772	11422667	86.98	['fastq_index_2/R289-0_cleaned/R289-0_cleaned.2.fq', 'fastq_index_2/R289-0_cleaned/R289-0_cleaned.1.fq']	R289-0_cleaned_raw.cram	6178267	0.95	R289-0_cleaned.tsv.xz	47.05	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	565715	224	0.64	0.320063	206449	0.274481	158991	0.001979	957	0.001508	768	0.028368	20356	0.023355	15291	0.000426	48	1e-06	4	0.000532	157	0.000275	115
R356-0_cleaned	R356-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	12404246	10573429	85.24	['fastq_index_4/R356-0_cleaned/R356-0_cleaned.1.fq', 'fastq_index_4/R356-0_cleaned/R356-0_cleaned.2.fq']	R356-0_cleaned_raw.cram	5720342	0.95	R356-0_cleaned.tsv.xz	46.12	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	475267	174	0.63	0.308069	176874	0.259657	131779	0.001772	791	0.00123	611	0.032465	15205	0.02661	10605	0.000305	62	1e-06	7	0.000527	136	0.000282	92
R64-0_cleaned	R64-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	39689366	35025549	88.25	['fastq_index_4/R64-0_cleaned/R64-0_cleaned.1.fq', 'fastq_index_4/R64-0_cleaned/R64-0_cleaned.2.fq']	R64-0_cleaned_raw.cram	18842103	0.95	R64-0_cleaned.tsv.xz	47.47	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	815123	275	0.64	0.308556	279945	0.263588	196501	0.001753	1281	0.00126	966	0.034051	25504	0.027114	17369	0.000256	61	1e-06	8	0.000412	183	0.000221	123
D111_cleaned	D111_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-18	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	23862746	20937272	87.74	['output/fastq_index/D111_cleaned/D111_cleaned.1.fq', 'output/fastq_index/D111_cleaned/D111_cleaned.2.fq']	D111_cleaned_raw.cram	11294047	0.95	D111_cleaned.tsv.xz	47.33	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	731919	274	0.62	0.313877	261621	0.270765	191082	0.001585	1161	0.001227	922	0.034968	26125	0.028941	18492	0.000407	46	2e-06	3	0.000419	168	0.000192	128
D58_cleaned	D58_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-20	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	20390122	17938893	87.98	['output/fastq_index/D58_cleaned/D58_cleaned.1.fq', 'output/fastq_index/D58_cleaned/D58_cleaned.2.fq']	D58_cleaned_raw.cram	9698126	0.95	D58_cleaned.tsv.xz	47.56	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	460081	195	0.63	0.2822	160476	0.24462	113250	0.001751	683	0.001188	523	0.03441	17819	0.027188	11909	0.000486	44	6.7e-05	4	0.000577	119	0.000277	79
G109_cleaned	G109_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-05	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	38292520	34881687	91.09	['fastq_index_2/G109_cleaned/G109_cleaned.2.fq', 'fastq_index_2/G109_cleaned/G109_cleaned.1.fq']	G109_cleaned_raw.cram	18403940	0.95	G109_cleaned.tsv.xz	48.06	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	528096	170	0.65	0.305178	190221	0.271514	136870	0.001297	740	0.001022	586	0.026564	18179	0.022054	12398	0.000364	50	3.7e-05	6	0.00048	147	0.000282	103
KNUH-KB-0052_cleaned	KNUH-KB-0052_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	50632772	44067843	87.03	['fastq_index/KNUH-KB-0052_cleaned/KNUH-KB-0052_cleaned.1.fq', 'fastq_index/KNUH-KB-0052_cleaned/KNUH-KB-0052_cleaned.2.fq']	KNUH-KB-0052_cleaned_raw.cram	23715265	0.95	KNUH-KB-0052_cleaned.tsv.xz	46.84	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	676907	241	0.41	0.236173	241512	0.179755	179078	0.00089	1031	0.000672	822	0.021371	23768	0.015814	16752	0.000136	57	1e-06	6	0.000349	189	0.000212	141
R65-0_cleaned	R65-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	29825242	26802854	89.87	['fastq_index_4/R65-0_cleaned/R65-0_cleaned.1.fq', 'fastq_index_4/R65-0_cleaned/R65-0_cleaned.2.fq']	R65-0_cleaned_raw.cram	14307729	0.95	R65-0_cleaned.tsv.xz	47.97	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	822962	318	0.58	0.308248	292477	0.248374	211894	0.001435	1414	0.001024	1107	0.029828	26140	0.023263	18085	0.000266	60	2e-06	10	0.000444	199	0.000242	149
KNUH-KB-0045_cleaned	KNUH-KB-0045_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	67101534	56224470	83.79	['fastq_index/KNUH-KB-0045_cleaned/KNUH-KB-0045_cleaned.2.fq', 'fastq_index/KNUH-KB-0045_cleaned/KNUH-KB-0045_cleaned.1.fq']	KNUH-KB-0045_cleaned_raw.cram	29952690	0.95	KNUH-KB-0045_cleaned.tsv.xz	44.64	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	1336288	463	0.6	0.334808	472202	0.272437	338503	0.002032	2164	0.001514	1716	0.023777	40555	0.020115	28549	0.00034	79	5e-06	15	0.00039	257	0.000166	184
igAN_191_cleaned	igAN_191_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	14376988	12830895	89.25	['fastq_index/igAN_191_cleaned/igAN_191_cleaned.2.fq', 'fastq_index/igAN_191_cleaned/igAN_191_cleaned.1.fq']	igAN_191_cleaned_raw.cram	6953855	0.95	igAN_191_cleaned.tsv.xz	48.37	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	481542	139	0.55	0.281332	166868	0.227389	120195	0.001315	711	0.001035	549	0.030678	15844	0.024092	11116	0.000285	35	0.0	0	0.000447	137	0.000282	96
R26-0_cleaned	R26-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	186323304	161768788	86.82	['fastq_index_4/R26-0_cleaned/R26-0_cleaned.1.fq', 'fastq_index_4/R26-0_cleaned/R26-0_cleaned.2.fq']	R26-0_cleaned_raw.cram	88307582	0.95	R26-0_cleaned.tsv.xz	47.39	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	926228	310	0.62	0.297599	309265	0.254542	221697	0.001692	1396	0.001158	1081	0.040071	29507	0.032815	20889	0.000525	71	2e-06	7	0.000487	209	0.000214	144
MN-3_cleaned	MN-3_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	31489556	26734047	84.9	['fastq_index/MN-3_cleaned/MN-3_cleaned.2.fq', 'fastq_index/MN-3_cleaned/MN-3_cleaned.1.fq']	MN-3_cleaned_raw.cram	14777116	0.95	MN-3_cleaned.tsv.xz	46.93	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	932632	309	0.55	0.278544	328394	0.221393	238527	0.001573	1468	0.001038	1149	0.022839	31394	0.017349	22006	0.000415	61	1.7e-05	10	0.000479	232	0.00021	167
R327-0_cleaned	R327-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	24628894	21844995	88.7	['fastq_index_3/R327-0_cleaned/R327-0_cleaned.2.fq', 'fastq_index_3/R327-0_cleaned/R327-0_cleaned.1.fq']	R327-0_cleaned_raw.cram	11769150	0.95	R327-0_cleaned.tsv.xz	47.79	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	474892	180	0.68	0.301721	172549	0.258884	129199	0.0014	804	0.001153	623	0.032385	15589	0.027319	11316	0.000188	48	9e-06	4	0.00039	119	0.000255	85
G380_cleaned	G380_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-07	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	32352280	28759369	88.89	['fastq_index_2/G380_cleaned/G380_cleaned.1.fq', 'fastq_index_2/G380_cleaned/G380_cleaned.2.fq']	G380_cleaned_raw.cram	15395271	0.95	G380_cleaned.tsv.xz	47.59	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	638313	215	0.63	0.314678	221955	0.265516	157987	0.001366	983	0.001044	783	0.035045	21253	0.026957	14566	0.000327	41	7e-06	8	0.000631	136	0.000328	103
G350_cleaned	G350_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-06	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	31152714	27706574	88.94	['fastq_index_2/G350_cleaned/G350_cleaned.1.fq', 'fastq_index_2/G350_cleaned/G350_cleaned.2.fq']	G350_cleaned_raw.cram	14798807	0.95	G350_cleaned.tsv.xz	47.5	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	501944	191	0.67	0.340174	186922	0.303649	136714	0.001597	780	0.001313	637	0.03234	19622	0.026967	13448	0.000444	49	0.000114	9	0.000477	148	0.000225	106
control_D16_cleaned	control_D16_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-18	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	13718210	12137197	88.48	['output/fastq_index/control_D16_cleaned/control_D16_cleaned.2.fq', 'output/fastq_index/control_D16_cleaned/control_D16_cleaned.1.fq']	control_D16_cleaned_raw.cram	6609300	0.95	control_D16_cleaned.tsv.xz	48.18	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	599338	212	0.62	0.304329	216227	0.253	159117	0.001438	959	0.001021	750	0.034358	21450	0.026796	15631	0.000331	43	3e-06	7	0.000612	171	0.000306	126
G209_cleaned	G209_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-05	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	31476524	27645305	87.83	['fastq_index_2/G209_cleaned/G209_cleaned.2.fq', 'fastq_index_2/G209_cleaned/G209_cleaned.1.fq']	G209_cleaned_raw.cram	14799499	0.95	G209_cleaned.tsv.xz	47.02	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	361171	164	0.63	0.290715	146782	0.254469	109690	0.001576	709	0.001358	589	0.032684	14888	0.026426	10355	0.000305	57	5.3e-05	15	0.00037	88	0.00011	57
S0184_cleaned	S0184_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	49787636	43045335	86.46	['fastq_index_4/S0184_cleaned/S0184_cleaned.2.fq', 'fastq_index_4/S0184_cleaned/S0184_cleaned.1.fq']	S0184_cleaned_raw.cram	23135080	0.95	S0184_cleaned.tsv.xz	46.47	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	713453	221	0.62	0.30353	238081	0.257703	177705	0.001564	1091	0.001137	859	0.026083	22374	0.022708	16895	0.000429	63	1e-06	8	0.000455	178	0.000231	117
SSV-KB-0053_cleaned	SSV-KB-0053_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	41207546	35082173	85.14	['fastq_index_3/SSV-KB-0053_cleaned/SSV-KB-0053_cleaned.1.fq', 'fastq_index_3/SSV-KB-0053_cleaned/SSV-KB-0053_cleaned.2.fq']	SSV-KB-0053_cleaned_raw.cram	18904123	0.95	SSV-KB-0053_cleaned.tsv.xz	45.88	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	986097	335	0.57	0.284679	350951	0.238373	255224	0.001632	1542	0.001143	1210	0.022904	32958	0.01897	22847	0.000231	66	7e-06	13	0.000339	231	0.000164	168
DSM00297_cleaned	DSM00297_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-22	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	4415574	3835920	86.87	['output/fastq_index/DSM00297_cleaned/DSM00297_cleaned.1.fq', 'output/fastq_index/DSM00297_cleaned/DSM00297_cleaned.2.fq']	DSM00297_cleaned_raw.cram	1584399	0.95	DSM00297_cleaned.tsv.xz	35.88	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	272643	147	0.75	0.416746	112336	0.372623	87897	0.002828	498	0.001635	403	0.020075	12286	0.01759	9211	0.001151	69	2.8e-05	11	0.00157	89	0.000488	59
G240_cleaned	G240_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-05	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	17911520	15776532	88.08	['fastq_index_2/G240_cleaned/G240_cleaned.1.fq', 'fastq_index_2/G240_cleaned/G240_cleaned.2.fq']	G240_cleaned_raw.cram	8572394	0.95	G240_cleaned.tsv.xz	47.86	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	513389	159	0.6	0.303461	181601	0.255418	129053	0.001399	767	0.001086	573	0.032611	18055	0.024341	12731	0.000236	41	1e-05	3	0.000574	140	0.000261	97
DSM00281_cleaned	DSM00281_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-22	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	3254026	2857430	87.81	['output/fastq_index/DSM00281_cleaned/DSM00281_cleaned.2.fq', 'output/fastq_index/DSM00281_cleaned/DSM00281_cleaned.1.fq']	DSM00281_cleaned_raw.cram	1559368	0.95	DSM00281_cleaned.tsv.xz	47.92	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	210276	81	0.64	0.290622	77213	0.253154	59183	0.001509	338	0.00135	275	0.036379	10060	0.02994	7311	0.000243	32	4.9e-05	5	0.00033	64	0.000185	44
S0315_cleaned	S0315_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	26753892	23999758	89.71	['fastq_index_3/S0315_cleaned/S0315_cleaned.2.fq', 'fastq_index_3/S0315_cleaned/S0315_cleaned.1.fq']	S0315_cleaned_raw.cram	12850935	0.95	S0315_cleaned.tsv.xz	48.03	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	369094	127	0.74	0.306944	134793	0.273988	94616	0.001876	547	0.001656	402	0.034887	11645	0.032134	7739	0.000243	45	9.3e-05	4	0.00046	123	0.000299	85
SSV-KB-0074_cleaned	SSV-KB-0074_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	38732630	33906666	87.54	['fastq_index_3/SSV-KB-0074_cleaned/SSV-KB-0074_cleaned.2.fq', 'fastq_index_3/SSV-KB-0074_cleaned/SSV-KB-0074_cleaned.1.fq']	SSV-KB-0074_cleaned_raw.cram	18250301	0.95	SSV-KB-0074_cleaned.tsv.xz	47.12	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	853677	308	0.53	0.254158	295230	0.209294	214074	0.001175	1296	0.000866	1033	0.022138	29685	0.018343	20671	0.000266	63	1e-05	5	0.000453	211	0.0002	151
control_D19_cleaned	control_D19_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-18	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	11667202	9830573	84.26	['output/fastq_index/control_D19_cleaned/control_D19_cleaned.1.fq', 'output/fastq_index/control_D19_cleaned/control_D19_cleaned.2.fq']	control_D19_cleaned_raw.cram	5423956	0.95	control_D19_cleaned.tsv.xz	46.49	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	413259	217	0.6	0.299164	153670	0.246348	107382	0.001758	742	0.001437	578	0.032535	14652	0.024803	9523	0.000385	45	6.2e-05	6	0.000313	75	0.000131	51
SNUH-KB-0050_cleaned	SNUH-KB-0050_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	31114852	28344517	91.1	['fastq_index_3/SNUH-KB-0050_cleaned/SNUH-KB-0050_cleaned.2.fq', 'fastq_index_3/SNUH-KB-0050_cleaned/SNUH-KB-0050_cleaned.1.fq']	SNUH-KB-0050_cleaned_raw.cram	15151395	0.95	SNUH-KB-0050_cleaned.tsv.xz	48.7	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	382123	151	0.66	0.300629	144723	0.264189	110535	0.001372	646	0.00097	508	0.046608	13891	0.038919	9940	0.000557	64	3e-06	11	0.000688	130	0.000435	94
R264-0_cleaned	R264-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	16069230	14432670	89.82	['fastq_index_2/R264-0_cleaned/R264-0_cleaned.1.fq', 'fastq_index_2/R264-0_cleaned/R264-0_cleaned.2.fq']	R264-0_cleaned_raw.cram	7747590	0.95	R264-0_cleaned.tsv.xz	48.21	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	480576	171	0.6	0.293812	172833	0.24475	127310	0.001411	824	0.001038	640	0.035385	18199	0.028597	13216	0.000281	57	2e-06	10	0.000478	119	0.000281	82
igAN_145_cleaned	igAN_145_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	11936272	10451291	87.56	['fastq_index/igAN_145_cleaned/igAN_145_cleaned.2.fq', 'fastq_index/igAN_145_cleaned/igAN_145_cleaned.1.fq']	igAN_145_cleaned_raw.cram	5739393	0.95	igAN_145_cleaned.tsv.xz	48.08	2.0.22	2026-04-07	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	313861	97	0.6	0.298924	115870	0.242849	83201	0.001321	514	0.00102	377	0.030279	10187	0.02305	7345	0.000394	38	1e-06	4	0.000544	102	0.00034	67
R119-0_cleaned	R119-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	26931858	24184992	89.8	['fastq_index/R119-0_cleaned/R119-0_cleaned.2.fq', 'fastq_index/R119-0_cleaned/R119-0_cleaned.1.fq']	R119-0_cleaned_raw.cram	12914034	0.95	R119-0_cleaned.tsv.xz	47.95	2.0.22	2026-04-07	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	430146	167	0.62	0.308836	160436	0.256927	121129	0.001168	673	0.001015	519	0.042213	15451	0.03246	10825	0.000125	54	3e-06	6	0.000492	132	0.00034	88
DSMC-KB-0049_cleaned	DSMC-KB-0049_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-23	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	24522950	21630403	88.2	['output/fastq_index/DSMC-KB-0049_cleaned/DSMC-KB-0049_cleaned.2.fq', 'output/fastq_index/DSMC-KB-0049_cleaned/DSMC-KB-0049_cleaned.1.fq']	DSMC-KB-0049_cleaned_raw.cram	11655352	0.95	DSMC-KB-0049_cleaned.tsv.xz	47.53	2.0.22	2026-04-07	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	594070	226	0.64	0.312204	211312	0.27019	155780	0.001808	956	0.00158	769	0.034969	21388	0.027812	15109	0.000316	41	6e-05	9	0.000274	122	0.000132	96
S0304_cleaned	S0304_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	37516522	33135262	88.32	['fastq_index_3/S0304_cleaned/S0304_cleaned.1.fq', 'fastq_index_3/S0304_cleaned/S0304_cleaned.2.fq']	S0304_cleaned_raw.cram	17766613	0.95	S0304_cleaned.tsv.xz	47.36	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	586324	205	0.62	0.293961	208755	0.253154	157292	0.001561	992	0.001115	788	0.032847	19715	0.027092	14079	0.000295	74	3.1e-05	11	0.000403	154	0.0002	107
DSMC-KB-0001_cleaned	DSMC-KB-0001_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-22	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	74968100	65348555	87.17	['output/fastq_index/DSMC-KB-0001_cleaned/DSMC-KB-0001_cleaned.1.fq', 'output/fastq_index/DSMC-KB-0001_cleaned/DSMC-KB-0001_cleaned.2.fq']	DSMC-KB-0001_cleaned_raw.cram	35054542	0.95	DSMC-KB-0001_cleaned.tsv.xz	46.76	2.0.22	2026-04-07	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	591756	227	0.64	0.312479	225075	0.268384	160060	0.002184	908	0.001679	697	0.034463	21045	0.027888	14499	0.000705	62	6.3e-05	12	0.0003	162	0.000109	116
control_1004_cleaned	control_1004_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-17	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	9240736	7785350	84.25	['output/fastq_index/control_1004_cleaned/control_1004_cleaned.1.fq', 'output/fastq_index/control_1004_cleaned/control_1004_cleaned.2.fq']	control_1004_cleaned_raw.cram	4335679	0.95	control_1004_cleaned.tsv.xz	46.92	2.0.22	2026-04-07	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	160919	54	0.71	0.457267	75940	0.388915	58194	0.001933	345	0.001733	269	0.017564	4780	0.014296	3437	0.000432	57	2.5e-05	13	0.000768	70	0.000503	48
D51_cleaned	D51_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-18	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	18717356	16470873	88.0	['output/fastq_index/D51_cleaned/D51_cleaned.2.fq', 'output/fastq_index/D51_cleaned/D51_cleaned.1.fq']	D51_cleaned_raw.cram	8903828	0.95	D51_cleaned.tsv.xz	47.57	2.0.22	2026-04-07	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	344078	150	0.62	0.281644	124930	0.241356	89297	0.001438	542	0.001213	420	0.035352	13707	0.027685	9359	0.000294	40	3.9e-05	3	0.00041	89	0.000197	58
S0285_cleaned	S0285_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	23409928	20067449	85.72	['fastq_index_3/S0285_cleaned/S0285_cleaned.2.fq', 'fastq_index_3/S0285_cleaned/S0285_cleaned.1.fq']	S0285_cleaned_raw.cram	10905572	0.95	S0285_cleaned.tsv.xz	46.59	2.0.22	2026-04-07	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	660694	270	0.6	0.270735	233178	0.231255	166382	0.001527	1104	0.00125	874	0.029738	23179	0.023319	16141	0.000275	45	6.4e-05	6	0.000528	154	0.000175	112
G433_cleaned	G433_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	24682038	22326023	90.45	['fastq_index/G433_cleaned/G433_cleaned.2.fq', 'fastq_index/G433_cleaned/G433_cleaned.1.fq']	G433_cleaned_raw.cram	11964593	0.95	G433_cleaned.tsv.xz	48.47	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	442708	145	0.63	0.30629	161422	0.260101	119207	0.001375	730	0.001121	561	0.039441	16381	0.031005	11092	0.000238	52	1.9e-05	6	0.000683	132	0.000375	97
R211-0_cleaned	R211-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-13	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	7173770	4857149	67.71	['fastq_index_2/R211-0_cleaned/R211-0_cleaned.1.fq', 'fastq_index_2/R211-0_cleaned/R211-0_cleaned.2.fq']	R211-0_cleaned_raw.cram	2593568	0.95	R211-0_cleaned.tsv.xz	36.15	2.0.22	2026-04-15	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	171556	89	0.81	0.304698	65476	0.286891	51522	0.001892	290	0.001525	235	0.030533	7372	0.029407	5853	0.00059	39	0.000123	3	0.000699	63	0.000403	42
DMN_105_cleaned	DMN_105_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-13	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	23052044	20233979	87.78	['fastq_index_1/DMN_105_cleaned/DMN_105_cleaned.2.fq', 'fastq_index_1/DMN_105_cleaned/DMN_105_cleaned.1.fq']	DMN_105_cleaned_raw.cram	10980976	0.95	DMN_105_cleaned.tsv.xz	47.64	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	449311	177	0.61	0.268061	160052	0.227458	115093	0.00209	756	0.001453	571	0.034978	16777	0.025342	11301	0.000554	53	6.3e-05	8	0.000482	123	0.000196	82
R3-0_cleaned	R3-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	39301636	35371429	90.0	['fastq_index_4/R3-0_cleaned/R3-0_cleaned.1.fq', 'fastq_index_4/R3-0_cleaned/R3-0_cleaned.2.fq']	R3-0_cleaned_raw.cram	18983875	0.95	R3-0_cleaned.tsv.xz	48.3	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	544348	200	0.64	0.31736	198571	0.268879	148141	0.001286	856	0.000986	653	0.037948	18793	0.030728	13720	0.000303	48	1e-06	6	0.000614	137	0.000327	100
DSMC-KB-0204_cleaned	DSMC-KB-0204_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-05	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	56028020	48252743	86.12	['fastq_index_2/DSMC-KB-0204_cleaned/DSMC-KB-0204_cleaned.1.fq', 'fastq_index_2/DSMC-KB-0204_cleaned/DSMC-KB-0204_cleaned.2.fq']	DSMC-KB-0204_cleaned_raw.cram	25921978	0.95	DSMC-KB-0204_cleaned.tsv.xz	46.27	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	512435	237	0.74	0.446473	191716	0.405759	141900	0.002261	898	0.001985	710	0.021396	20469	0.017649	14296	0.00021	66	6.2e-05	14	0.000545	152	0.000301	104
control_D13_cleaned	control_D13_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-18	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	12105764	10676639	88.19	['output/fastq_index/control_D13_cleaned/control_D13_cleaned.1.fq', 'output/fastq_index/control_D13_cleaned/control_D13_cleaned.2.fq']	control_D13_cleaned_raw.cram	5827972	0.95	control_D13_cleaned.tsv.xz	48.14	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	476984	191	0.64	0.310061	179162	0.262017	128370	0.001516	789	0.001213	612	0.034073	18263	0.026575	12428	0.00039	39	3e-05	4	0.000547	126	0.000277	96
G075_cleaned	G075_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-05	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	30014414	26882736	89.57	['fastq_index_2/G075_cleaned/G075_cleaned.2.fq', 'fastq_index_2/G075_cleaned/G075_cleaned.1.fq']	G075_cleaned_raw.cram	14320774	0.95	G075_cleaned.tsv.xz	47.71	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	511182	222	0.68	0.270836	177903	0.241087	135493	0.001447	854	0.001174	687	0.041663	20131	0.036918	14992	0.000297	44	3.7e-05	6	0.00052	139	0.000297	100
SSV00158_cleaned	SSV00158_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	224739038	180630448	80.37	['fastq_index_3/SSV00158_cleaned/SSV00158_cleaned.1.fq', 'fastq_index_3/SSV00158_cleaned/SSV00158_cleaned.2.fq']	SSV00158_cleaned_raw.cram	72879168	0.95	SSV00158_cleaned.tsv.xz	32.43	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	1586506	467	0.48	0.243704	534708	0.201539	375431	0.001262	2434	0.001045	1900	0.020879	47290	0.016953	31572	0.000168	96	8e-06	17	0.000278	310	0.000122	223
S0260_cleaned	S0260_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	25130848	21159193	84.2	['fastq_index_3/S0260_cleaned/S0260_cleaned.1.fq', 'fastq_index_3/S0260_cleaned/S0260_cleaned.2.fq']	S0260_cleaned_raw.cram	11328598	0.95	S0260_cleaned.tsv.xz	45.08	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	473586	158	0.61	0.338012	173046	0.284282	119469	0.002147	695	0.001752	529	0.035967	16597	0.029814	11063	0.000177	42	1e-06	7	0.00052	129	0.000191	93
DSMC-KB-0193_cleaned	DSMC-KB-0193_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-04	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	17414068	14931454	85.74	['fastq_index_2/DSMC-KB-0193_cleaned/DSMC-KB-0193_cleaned.1.fq', 'fastq_index_2/DSMC-KB-0193_cleaned/DSMC-KB-0193_cleaned.2.fq']	DSMC-KB-0193_cleaned_raw.cram	8023527	0.95	DSMC-KB-0193_cleaned.tsv.xz	46.07	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	573362	262	0.63	0.308998	223913	0.269661	170350	0.001661	1050	0.001271	829	0.031408	21996	0.025756	15891	0.000369	80	2.7e-05	17	0.000559	190	0.000335	136
DMN_192_cleaned	DMN_192_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-13	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	17683044	15838597	89.57	['fastq_index_1/DMN_192_cleaned/DMN_192_cleaned.2.fq', 'fastq_index_1/DMN_192_cleaned/DMN_192_cleaned.1.fq']	DMN_192_cleaned_raw.cram	8567683	0.95	DMN_192_cleaned.tsv.xz	48.45	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	211089	70	0.67	0.303395	82966	0.266715	66374	0.001568	366	0.001131	302	0.040012	8091	0.031692	5867	0.00045	52	4.2e-05	13	0.000608	69	0.000377	48
G286_cleaned	G286_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-05	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	43617594	39761819	91.16	['fastq_index_2/G286_cleaned/G286_cleaned.1.fq', 'fastq_index_2/G286_cleaned/G286_cleaned.2.fq']	G286_cleaned_raw.cram	21173571	0.95	G286_cleaned.tsv.xz	48.54	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	446614	167	0.61	0.269566	162950	0.235399	125555	0.001153	709	0.000962	543	0.037175	15181	0.031421	11170	0.00029	61	1e-06	8	0.000581	147	0.000328	98
SNUH-KB-0159_cleaned	SNUH-KB-0159_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	31065774	27694953	89.15	['fastq_index_3/SNUH-KB-0159_cleaned/SNUH-KB-0159_cleaned.1.fq', 'fastq_index_3/SNUH-KB-0159_cleaned/SNUH-KB-0159_cleaned.2.fq']	SNUH-KB-0159_cleaned_raw.cram	14867185	0.95	SNUH-KB-0159_cleaned.tsv.xz	47.86	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	581881	207	0.59	0.279327	206528	0.233283	143882	0.001569	846	0.001185	647	0.034031	19807	0.025811	13252	0.000359	55	4.4e-05	4	0.000614	161	0.000257	108
SNUH-KB-0059_cleaned	SNUH-KB-0059_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	13834390	12160401	87.9	['fastq_index_3/SNUH-KB-0059_cleaned/SNUH-KB-0059_cleaned.2.fq', 'fastq_index_3/SNUH-KB-0059_cleaned/SNUH-KB-0059_cleaned.1.fq']	SNUH-KB-0059_cleaned_raw.cram	6602293	0.95	SNUH-KB-0059_cleaned.tsv.xz	47.72	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	462823	148	0.62	0.318519	167566	0.269836	126986	0.001699	735	0.001197	569	0.029244	15771	0.023776	11641	0.000376	48	1e-05	7	0.000533	121	0.000242	91
DSM00218_cleaned	DSM00218_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-21	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	40643706	35601787	87.59	['output/fastq_index/DSM00218_cleaned/DSM00218_cleaned.1.fq', 'output/fastq_index/DSM00218_cleaned/DSM00218_cleaned.2.fq']	DSM00218_cleaned_raw.cram	19031935	0.95	DSM00218_cleaned.tsv.xz	46.83	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	297548	125	0.67	0.360608	116574	0.326999	90884	0.002086	511	0.001945	415	0.039418	11265	0.034467	8518	0.000257	41	9.2e-05	7	0.000466	106	0.000323	79
G437_cleaned	G437_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	24549128	21966178	89.48	['fastq_index/G437_cleaned/G437_cleaned.2.fq', 'fastq_index/G437_cleaned/G437_cleaned.1.fq']	G437_cleaned_raw.cram	11853695	0.95	G437_cleaned.tsv.xz	48.29	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	419313	118	0.67	0.319026	154749	0.277508	118016	0.00153	664	0.001194	531	0.036816	15697	0.02945	11430	0.000368	49	4.9e-05	8	0.000636	110	0.000293	80
igAN_203_cleaned	igAN_203_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	12758072	10812075	84.75	['fastq_index/igAN_203_cleaned/igAN_203_cleaned.2.fq', 'fastq_index/igAN_203_cleaned/igAN_203_cleaned.1.fq']	igAN_203_cleaned_raw.cram	5960794	0.95	igAN_203_cleaned.tsv.xz	46.72	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	506094	186	0.63	0.306158	186256	0.265176	137666	0.001702	879	0.001436	697	0.032212	17204	0.027418	12374	0.000398	42	3e-06	11	0.000326	115	0.000154	90
R347-0_cleaned	R347-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	17716062	14585635	82.33	['fastq_index_4/R347-0_cleaned/R347-0_cleaned.2.fq', 'fastq_index_4/R347-0_cleaned/R347-0_cleaned.1.fq']	R347-0_cleaned_raw.cram	7943142	0.95	R347-0_cleaned.tsv.xz	44.84	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	824797	341	0.58	0.302092	291402	0.250134	215633	0.00171	1421	0.00131	1154	0.020936	27966	0.017278	20601	0.000291	58	1e-06	5	0.000396	197	0.000163	139
G431_cleaned	G431_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	14583226	13205566	90.55	['fastq_index/G431_cleaned/G431_cleaned.1.fq', 'fastq_index/G431_cleaned/G431_cleaned.2.fq']	G431_cleaned_raw.cram	7070298	0.95	G431_cleaned.tsv.xz	48.48	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	155731	69	0.65	0.288766	55871	0.250648	42547	0.001122	265	0.000904	206	0.054188	6723	0.046123	4890	0.000289	30	2e-06	5	0.000458	51	0.000326	34
DSMC-KB-0202_cleaned	DSMC-KB-0202_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-05	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	47380026	41170115	86.89	['fastq_index_2/DSMC-KB-0202_cleaned/DSMC-KB-0202_cleaned.1.fq', 'fastq_index_2/DSMC-KB-0202_cleaned/DSMC-KB-0202_cleaned.2.fq']	DSMC-KB-0202_cleaned_raw.cram	22050012	0.95	DSMC-KB-0202_cleaned.tsv.xz	46.54	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	1162347	372	0.56	0.303615	399418	0.242384	281197	0.00169	1796	0.001241	1407	0.0239	36237	0.018853	24379	0.00019	46	1e-05	3	0.000353	223	0.000143	158
SSV-KB-0033_cleaned	SSV-KB-0033_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	44828570	40833659	91.09	['fastq_index_3/SSV-KB-0033_cleaned/SSV-KB-0033_cleaned.2.fq', 'fastq_index_3/SSV-KB-0033_cleaned/SSV-KB-0033_cleaned.1.fq']	SSV-KB-0033_cleaned_raw.cram	21744835	0.95	SSV-KB-0033_cleaned.tsv.xz	48.51	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	442220	217	0.61	0.297801	160734	0.236867	122989	0.001129	690	0.000846	560	0.046109	18065	0.033371	13068	0.000218	64	2e-06	12	0.0005	132	0.000298	92
control_BRM802_cleaned	control_BRM802_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-18	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	14544980	12623146	86.79	['output/fastq_index/control_BRM802_cleaned/control_BRM802_cleaned.1.fq', 'output/fastq_index/control_BRM802_cleaned/control_BRM802_cleaned.2.fq']	control_BRM802_cleaned_raw.cram	6931604	0.95	control_BRM802_cleaned.tsv.xz	47.66	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	539018	207	0.66	0.319083	193967	0.275824	138095	0.00186	906	0.001335	708	0.032582	19946	0.026192	13750	0.000586	33	5e-06	2	0.000495	123	0.000132	87
DMN_193_cleaned	DMN_193_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	13887650	11966088	86.16	['fastq_index_1/DMN_193_cleaned/DMN_193_cleaned.2.fq', 'fastq_index_1/DMN_193_cleaned/DMN_193_cleaned.1.fq']	DMN_193_cleaned_raw.cram	6559224	0.95	DMN_193_cleaned.tsv.xz	47.23	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	569475	222	0.6	0.287913	194740	0.241177	141248	0.001647	898	0.00133	719	0.030958	20472	0.024267	14167	0.000328	34	3e-05	1	0.000437	116	0.000172	85
R129-0_cleaned	R129-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	20252442	17925155	88.51	['fastq_index_4/R129-0_cleaned/R129-0_cleaned.2.fq', 'fastq_index_4/R129-0_cleaned/R129-0_cleaned.1.fq']	R129-0_cleaned_raw.cram	9607254	0.95	R129-0_cleaned.tsv.xz	47.44	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	447625	191	0.6	0.305544	164171	0.255358	122324	0.001639	681	0.00119	540	0.036882	14869	0.02964	10730	0.000602	47	1.8e-05	7	0.0006	122	0.000289	88
SSV-KB-0027_cleaned	SSV-KB-0027_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	15438026	13769790	89.19	['fastq_index_3/SSV-KB-0027_cleaned/SSV-KB-0027_cleaned.1.fq', 'fastq_index_3/SSV-KB-0027_cleaned/SSV-KB-0027_cleaned.2.fq']	SSV-KB-0027_cleaned_raw.cram	7435229	0.95	SSV-KB-0027_cleaned.tsv.xz	48.16	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	546539	162	0.57	0.287197	190039	0.236316	134672	0.001278	779	0.000962	608	0.029553	17942	0.024141	12544	0.000307	36	0.0	3	0.000505	145	0.000258	108
DSMC-KB-0006_cleaned	DSMC-KB-0006_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-22	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	61402550	55773779	90.83	['output/fastq_index/DSMC-KB-0006_cleaned/DSMC-KB-0006_cleaned.1.fq', 'output/fastq_index/DSMC-KB-0006_cleaned/DSMC-KB-0006_cleaned.2.fq']	DSMC-KB-0006_cleaned_raw.cram	29708635	0.95	DSMC-KB-0006_cleaned.tsv.xz	48.38	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	449663	200	0.66	0.289461	166480	0.253681	124601	0.001181	758	0.001007	590	0.043161	16529	0.035439	11794	0.00012	54	6e-06	11	0.000612	127	0.000399	87
DSMC-KB-0205_cleaned	DSMC-KB-0205_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-05	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	57235468	51223960	89.5	['fastq_index_2/DSMC-KB-0205_cleaned/DSMC-KB-0205_cleaned.1.fq', 'fastq_index_2/DSMC-KB-0205_cleaned/DSMC-KB-0205_cleaned.2.fq']	DSMC-KB-0205_cleaned_raw.cram	27295482	0.95	DSMC-KB-0205_cleaned.tsv.xz	47.69	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	863188	296	0.51	0.272247	304617	0.213339	221003	0.001175	1346	0.000889	1047	0.029847	28229	0.021095	19332	0.000231	66	2e-06	11	0.000418	237	0.00024	167
DSMC-KB-0106_cleaned	DSMC-KB-0106_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	56411534	51207237	90.77	['fastq_index_2/DSMC-KB-0106_cleaned/DSMC-KB-0106_cleaned.1.fq', 'fastq_index_2/DSMC-KB-0106_cleaned/DSMC-KB-0106_cleaned.2.fq']	DSMC-KB-0106_cleaned_raw.cram	27082878	0.95	DSMC-KB-0106_cleaned.tsv.xz	48.01	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	472423	171	0.64	0.308102	181297	0.264962	139568	0.001164	728	0.001005	577	0.036968	17482	0.030476	12470	0.000283	59	0.0	7	0.00051	153	0.000335	110
D109_cleaned	D109_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-18	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	21218982	18707894	88.17	['output/fastq_index/D109_cleaned/D109_cleaned.2.fq', 'output/fastq_index/D109_cleaned/D109_cleaned.1.fq']	D109_cleaned_raw.cram	10082109	0.95	D109_cleaned.tsv.xz	47.51	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	636170	238	0.63	0.331199	242803	0.274847	178418	0.001387	1070	0.001157	851	0.036588	22961	0.028425	15786	0.000218	49	2e-06	6	0.000518	171	0.000357	126
G256_cleaned	G256_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-05	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	27739428	24871745	89.66	['fastq_index_2/G256_cleaned/G256_cleaned.2.fq', 'fastq_index_2/G256_cleaned/G256_cleaned.1.fq']	G256_cleaned_raw.cram	13382395	0.95	G256_cleaned.tsv.xz	48.24	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	570086	173	0.67	0.313944	201168	0.273935	145842	0.0016	867	0.001326	693	0.035326	17915	0.030204	12537	0.000249	37	4e-06	3	0.000525	142	0.000331	107
igAN_167_cleaned	igAN_167_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	12626986	10823932	85.72	['fastq_index/igAN_167_cleaned/igAN_167_cleaned.2.fq', 'fastq_index/igAN_167_cleaned/igAN_167_cleaned.1.fq']	igAN_167_cleaned_raw.cram	6003430	0.95	igAN_167_cleaned.tsv.xz	47.54	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	432792	182	0.67	0.34172	163319	0.299848	123064	0.001826	691	0.001155	566	0.034138	17070	0.027901	12616	0.000563	37	5e-06	3	0.000472	115	0.000283	87
SNUH-KB-0225_cleaned	SNUH-KB-0225_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	42246768	37336395	88.38	['fastq_index_3/SNUH-KB-0225_cleaned/SNUH-KB-0225_cleaned.1.fq', 'fastq_index_3/SNUH-KB-0225_cleaned/SNUH-KB-0225_cleaned.2.fq']	SNUH-KB-0225_cleaned_raw.cram	20058582	0.95	SNUH-KB-0225_cleaned.tsv.xz	47.48	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	757134	196	0.54	0.280319	253379	0.221715	174904	0.001448	1119	0.000949	842	0.026233	24749	0.020216	16772	0.00037	50	1.3e-05	4	0.000424	176	0.000211	124
DSMC-KB-0198_cleaned	DSMC-KB-0198_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-05	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	39130854	34235531	87.49	['fastq_index_2/DSMC-KB-0198_cleaned/DSMC-KB-0198_cleaned.1.fq', 'fastq_index_2/DSMC-KB-0198_cleaned/DSMC-KB-0198_cleaned.2.fq']	DSMC-KB-0198_cleaned_raw.cram	18362340	0.95	DSMC-KB-0198_cleaned.tsv.xz	46.93	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	964559	311	0.59	0.286799	326713	0.240708	233550	0.001614	1504	0.001231	1164	0.02634	31624	0.022001	21757	0.000159	44	7e-06	5	0.000387	203	0.000137	147
G414_cleaned	G414_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	27662038	23693977	85.66	['fastq_index/G414_cleaned/G414_cleaned.2.fq', 'fastq_index/G414_cleaned/G414_cleaned.1.fq']	G414_cleaned_raw.cram	12741294	0.95	G414_cleaned.tsv.xz	46.06	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	1053071	421	0.63	0.302695	370596	0.253474	277966	0.001474	1854	0.001089	1521	0.034691	35709	0.028545	26122	0.000198	49	0.0	4	0.000424	201	0.000225	151
R111-0_cleaned	R111-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	40448576	36171294	89.43	['fastq_index/R111-0_cleaned/R111-0_cleaned.1.fq', 'fastq_index/R111-0_cleaned/R111-0_cleaned.2.fq']	R111-0_cleaned_raw.cram	19326882	0.95	R111-0_cleaned.tsv.xz	47.78	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	866590	311	0.67	0.32208	304812	0.275305	220155	0.001619	1379	0.001386	1094	0.030573	26770	0.026263	18898	0.000114	59	0.0	11	0.000448	207	0.000275	150
DSMC-KB-0048_cleaned	DSMC-KB-0048_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-23	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	23183844	20705974	89.31	['output/fastq_index/DSMC-KB-0048_cleaned/DSMC-KB-0048_cleaned.1.fq', 'output/fastq_index/DSMC-KB-0048_cleaned/DSMC-KB-0048_cleaned.2.fq']	DSMC-KB-0048_cleaned_raw.cram	11121977	0.95	DSMC-KB-0048_cleaned.tsv.xz	47.97	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	634394	217	0.58	0.274367	219329	0.227063	152487	0.001279	929	0.000949	726	0.02871	20788	0.022656	14163	0.000247	42	2.2e-05	4	0.000414	154	0.000227	108
R74-0_cleaned	R74-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	47802408	38392741	80.32	['fastq_index_4/R74-0_cleaned/R74-0_cleaned.1.fq', 'fastq_index_4/R74-0_cleaned/R74-0_cleaned.2.fq']	R74-0_cleaned_raw.cram	21389582	0.95	R74-0_cleaned.tsv.xz	44.75	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	612846	263	0.71	0.43683	227388	0.388464	177297	0.001948	1054	0.00132	848	0.021618	23497	0.018157	17780	0.002031	78	0.000324	15	0.001197	156	0.000538	107
DSM00271_cleaned	DSM00271_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-21	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	994354	877997	88.3	['output/fastq_index/DSM00271_cleaned/DSM00271_cleaned.2.fq', 'output/fastq_index/DSM00271_cleaned/DSM00271_cleaned.1.fq']	DSM00271_cleaned_raw.cram	475602	0.95	DSM00271_cleaned.tsv.xz	47.83	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	178712	106	0.66	0.300789	69691	0.260511	53636	0.001768	294	0.001308	226	0.030384	8430	0.027001	6339	0.00049	38	4.6e-05	4	0.000655	61	0.000302	36
control_D43_cleaned	control_D43_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-18	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	14665594	12839154	87.55	['output/fastq_index/control_D43_cleaned/control_D43_cleaned.2.fq', 'output/fastq_index/control_D43_cleaned/control_D43_cleaned.1.fq']	control_D43_cleaned_raw.cram	7012743	0.95	control_D43_cleaned.tsv.xz	47.82	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	576023	223	0.59	0.286228	211837	0.23573	150957	0.001497	930	0.001187	740	0.029217	19952	0.022036	13392	0.000284	37	4.6e-05	3	0.000361	117	0.000184	89
G322_cleaned	G322_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-06	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	34711602	31123070	89.66	['fastq_index_2/G322_cleaned/G322_cleaned.1.fq', 'fastq_index_2/G322_cleaned/G322_cleaned.2.fq']	G322_cleaned_raw.cram	16663999	0.95	G322_cleaned.tsv.xz	48.01	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	480748	159	0.56	0.274035	176456	0.231369	132706	0.001349	774	0.001046	619	0.03331	16006	0.027671	11563	0.000295	61	4e-06	8	0.000442	137	0.000273	98
DSMC-KB-0038_cleaned	DSMC-KB-0038_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-23	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	19214834	16551334	86.14	['output/fastq_index/DSMC-KB-0038_cleaned/DSMC-KB-0038_cleaned.1.fq', 'output/fastq_index/DSMC-KB-0038_cleaned/DSMC-KB-0038_cleaned.2.fq']	DSMC-KB-0038_cleaned_raw.cram	9042728	0.95	DSMC-KB-0038_cleaned.tsv.xz	47.06	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	620712	245	0.59	0.303083	227278	0.248546	165458	0.001586	1006	0.00107	814	0.030566	22247	0.023529	15868	0.000549	50	3.2e-05	9	0.000365	144	0.000186	107
R307-0_cleaned	R307-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	36271886	32333549	89.14	['fastq_index_3/R307-0_cleaned/R307-0_cleaned.2.fq', 'fastq_index_3/R307-0_cleaned/R307-0_cleaned.1.fq']	R307-0_cleaned_raw.cram	17244581	0.95	R307-0_cleaned.tsv.xz	47.54	2.0.22	2026-04-15	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	591771	228	0.63	0.29815	219010	0.254464	163239	0.001277	1041	0.000964	825	0.043555	21763	0.033575	15575	0.000247	66	4e-06	10	0.000623	152	0.000327	112
BRMH-KB-0062_cleaned	BRMH-KB-0062_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-13	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	42099666	34452072	81.83	['fastq_index_1/BRMH-KB-0062_cleaned/BRMH-KB-0062_cleaned.1.fq', 'fastq_index_1/BRMH-KB-0062_cleaned/BRMH-KB-0062_cleaned.2.fq']	BRMH-KB-0062_cleaned_raw.cram	18530719	0.95	BRMH-KB-0062_cleaned.tsv.xz	44.02	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	983879	341	0.58	0.277136	342610	0.230472	247620	0.001545	1654	0.001198	1329	0.025029	31919	0.02024	22309	0.000261	57	3.2e-05	11	0.000335	208	0.000129	145
R195-0_cleaned	R195-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	36924626	32282443	87.43	['fastq_index_4/R195-0_cleaned/R195-0_cleaned.1.fq', 'fastq_index_4/R195-0_cleaned/R195-0_cleaned.2.fq']	R195-0_cleaned_raw.cram	17371258	0.95	R195-0_cleaned.tsv.xz	47.05	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	934857	355	0.6	0.308147	341131	0.258533	251988	0.001533	1486	0.001165	1177	0.033139	31484	0.027929	22361	0.000308	70	2.8e-05	13	0.000523	225	0.000255	169
S0221_cleaned	S0221_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-04	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	29492866	25566747	86.69	['fastq_index_4/S0221_cleaned/S0221_cleaned.2.fq', 'fastq_index_4/S0221_cleaned/S0221_cleaned.1.fq']	S0221_cleaned_raw.cram	13762554	0.95	S0221_cleaned.tsv.xz	46.66	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	385276	169	0.59	0.321178	156758	0.25847	106783	0.002055	775	0.001071	533	0.025852	13738	0.019263	8950	0.000905	68	8.8e-05	11	0.000703	111	0.000366	72
R355-0_cleaned	R355-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	28195574	25474558	90.35	['fastq_index_4/R355-0_cleaned/R355-0_cleaned.2.fq', 'fastq_index_4/R355-0_cleaned/R355-0_cleaned.1.fq']	R355-0_cleaned_raw.cram	13689865	0.95	R355-0_cleaned.tsv.xz	48.55	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	370757	122	0.62	0.29955	137271	0.257578	107843	0.001455	600	0.001105	484	0.038007	13627	0.031859	9976	0.000423	56	1.6e-05	4	0.000581	124	0.000357	80
G453_cleaned	G453_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	24536056	21744362	88.62	['fastq_index/G453_cleaned/G453_cleaned.1.fq', 'fastq_index/G453_cleaned/G453_cleaned.2.fq']	G453_cleaned_raw.cram	11737334	0.95	G453_cleaned.tsv.xz	47.84	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	283569	104	0.71	0.381172	109376	0.340469	86264	0.002615	470	0.001187	373	0.025439	9564	0.022975	7000	0.001128	60	4.9e-05	14	0.00065	95	0.000365	68
G368_cleaned	G368_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	29160916	25268910	86.65	['fastq_index_4/G368_cleaned/G368_cleaned.2.fq', 'fastq_index_4/G368_cleaned/G368_cleaned.1.fq']	G368_cleaned_raw.cram	13507337	0.95	G368_cleaned.tsv.xz	46.32	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	1000770	360	0.55	0.285727	357568	0.229102	265475	0.001762	1639	0.001287	1313	0.019748	32636	0.015648	23178	0.000411	95	1.3e-05	23	0.000475	253	0.000209	180
KNUH-KB-0025_cleaned	KNUH-KB-0025_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	18639560	16761394	89.92	['fastq_index/KNUH-KB-0025_cleaned/KNUH-KB-0025_cleaned.1.fq', 'fastq_index/KNUH-KB-0025_cleaned/KNUH-KB-0025_cleaned.2.fq']	KNUH-KB-0025_cleaned_raw.cram	8863032	0.95	KNUH-KB-0025_cleaned.tsv.xz	47.55	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	220681	78	0.62	0.308726	87701	0.265693	66329	0.001202	365	0.000923	275	0.040529	8083	0.032962	5760	0.000239	40	0.0	2	0.000574	90	0.00039	62
DSM00223_cleaned	DSM00223_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-21	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	43027928	37183969	86.42	['output/fastq_index/DSM00223_cleaned/DSM00223_cleaned.2.fq', 'output/fastq_index/DSM00223_cleaned/DSM00223_cleaned.1.fq']	DSM00223_cleaned_raw.cram	19836692	0.95	DSM00223_cleaned.tsv.xz	46.1	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	658741	232	0.57	0.260477	229740	0.215136	167604	0.001418	1053	0.001096	836	0.027675	19534	0.022184	14124	0.000316	63	2e-06	6	0.000365	166	0.000207	111
DSMC-KB-0013_cleaned	DSMC-KB-0013_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-22	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	35438786	32033403	90.39	['output/fastq_index/DSMC-KB-0013_cleaned/DSMC-KB-0013_cleaned.1.fq', 'output/fastq_index/DSMC-KB-0013_cleaned/DSMC-KB-0013_cleaned.2.fq']	DSMC-KB-0013_cleaned_raw.cram	17075126	0.95	DSMC-KB-0013_cleaned.tsv.xz	48.18	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	602017	186	0.6	0.287706	214067	0.238804	148314	0.001318	944	0.000941	698	0.035612	19712	0.027343	13139	0.000385	48	0.0	5	0.000559	149	0.000304	109
control_1019_cleaned	control_1019_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-18	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	16701362	14790749	88.56	['output/fastq_index/control_1019_cleaned/control_1019_cleaned.1.fq', 'output/fastq_index/control_1019_cleaned/control_1019_cleaned.2.fq']	control_1019_cleaned_raw.cram	8051164	0.95	control_1019_cleaned.tsv.xz	48.21	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	472735	133	0.61	0.314989	169650	0.256953	120900	0.001195	696	0.00091	528	0.034562	15634	0.025099	10564	0.000378	50	1.8e-05	6	0.000509	129	0.000294	91
R107-0_cleaned	R107-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	27657498	24715538	89.36	['fastq_index_4/R107-0_cleaned/R107-0_cleaned.1.fq', 'fastq_index_4/R107-0_cleaned/R107-0_cleaned.2.fq']	R107-0_cleaned_raw.cram	13253851	0.95	R107-0_cleaned.tsv.xz	47.92	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	312056	125	0.57	0.258556	119263	0.22686	96633	0.001246	529	0.000893	422	0.034373	10730	0.029571	8228	0.000494	60	0.0	4	0.000527	110	0.000351	76
SNUH-KB-0172_cleaned	SNUH-KB-0172_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	35710694	31716159	88.81	['fastq_index_3/SNUH-KB-0172_cleaned/SNUH-KB-0172_cleaned.2.fq', 'fastq_index_3/SNUH-KB-0172_cleaned/SNUH-KB-0172_cleaned.1.fq']	SNUH-KB-0172_cleaned_raw.cram	17142562	0.95	SNUH-KB-0172_cleaned.tsv.xz	48.0	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	300391	124	0.58	0.266266	109708	0.22199	81011	0.001265	460	0.001005	358	0.032289	10315	0.022762	7074	0.000369	51	7.5e-05	5	0.000545	99	0.000249	62
G316_cleaned	G316_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-06	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	36083374	32014494	88.72	['fastq_index_2/G316_cleaned/G316_cleaned.1.fq', 'fastq_index_2/G316_cleaned/G316_cleaned.2.fq']	G316_cleaned_raw.cram	17021551	0.95	G316_cleaned.tsv.xz	47.17	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	775053	295	0.55	0.301253	272686	0.237678	194175	0.00176	1302	0.001326	1018	0.021878	26188	0.01755	18081	0.000285	53	6e-06	6	0.000382	179	0.000147	127
G290_cleaned	G290_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-06	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	31315012	27955309	89.27	['fastq_index_2/G290_cleaned/G290_cleaned.1.fq', 'fastq_index_2/G290_cleaned/G290_cleaned.2.fq']	G290_cleaned_raw.cram	14995810	0.95	G290_cleaned.tsv.xz	47.89	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	850498	302	0.66	0.316364	302174	0.273799	220986	0.001447	1367	0.001082	1103	0.033601	28059	0.028146	19990	0.000272	59	1e-06	7	0.000526	194	0.000291	149
MN_217_cleaned	MN_217_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	14202052	12408163	87.37	['fastq_index/MN_217_cleaned/MN_217_cleaned.1.fq', 'fastq_index/MN_217_cleaned/MN_217_cleaned.2.fq']	MN_217_cleaned_raw.cram	6762210	0.95	MN_217_cleaned.tsv.xz	47.61	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	700673	283	0.62	0.294561	252957	0.252475	185644	0.001816	1207	0.001308	960	0.032385	22821	0.027371	15687	0.000468	60	1.4e-05	11	0.000616	170	0.000231	121
DSMC-KB-0060_cleaned	DSMC-KB-0060_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-23	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	15123922	13423619	88.76	['output/fastq_index/DSMC-KB-0060_cleaned/DSMC-KB-0060_cleaned.2.fq', 'output/fastq_index/DSMC-KB-0060_cleaned/DSMC-KB-0060_cleaned.1.fq']	DSMC-KB-0060_cleaned_raw.cram	7219536	0.95	DSMC-KB-0060_cleaned.tsv.xz	47.74	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	258705	86	0.69	0.341976	102014	0.299634	77414	0.001469	437	0.000967	339	0.036429	9477	0.0307	6803	0.000503	57	2e-05	12	0.000592	90	0.000346	65
G477_cleaned	G477_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	41296710	36964591	89.51	['fastq_index/G477_cleaned/G477_cleaned.1.fq', 'fastq_index/G477_cleaned/G477_cleaned.2.fq']	G477_cleaned_raw.cram	19718195	0.95	G477_cleaned.tsv.xz	47.75	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	620270	233	0.61	0.280856	224800	0.24062	159813	0.001108	948	0.000829	708	0.03237	20408	0.026405	14112	0.000241	56	1e-06	10	0.000533	163	0.00029	114
G410_cleaned	G410_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-23	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	14012060	8179310	58.37	['fastq_index/G410_cleaned/G410_cleaned.1.fq', 'fastq_index/G410_cleaned/G410_cleaned.2.fq']	G410_cleaned_raw.cram	4660005	0.95	G410_cleaned.tsv.xz	33.26	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	61738	31	0.66	0.288958	28099	0.271804	21856	0.003253	203	0.001909	159	0.023898	2556	0.010745	1922	0.001171	38	0.000208	9	0.000295	24	0.000126	10
S0076_cleaned	S0076_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	48775858	42183322	86.48	['fastq_index_3/S0076_cleaned/S0076_cleaned.2.fq', 'fastq_index_3/S0076_cleaned/S0076_cleaned.1.fq']	S0076_cleaned_raw.cram	22527832	0.95	S0076_cleaned.tsv.xz	46.19	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	780513	265	0.63	0.302788	279481	0.256475	203744	0.001293	1209	0.001061	971	0.033279	27098	0.026125	18971	0.000212	57	9e-06	11	0.0005	205	0.000288	145
S0248_cleaned	S0248_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	20692262	18703301	90.39	['fastq_index_3/S0248_cleaned/S0248_cleaned.1.fq', 'fastq_index_3/S0248_cleaned/S0248_cleaned.2.fq']	S0248_cleaned_raw.cram	9959618	0.95	S0248_cleaned.tsv.xz	48.13	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	336583	120	0.64	0.279696	125575	0.249559	94829	0.000967	483	0.0008	379	0.035493	12183	0.030075	8779	0.000336	48	2e-06	9	0.0005	100	0.0003	72
KNUH-KB-0050_cleaned	KNUH-KB-0050_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	74785544	64829449	86.69	['fastq_index/KNUH-KB-0050_cleaned/KNUH-KB-0050_cleaned.2.fq', 'fastq_index/KNUH-KB-0050_cleaned/KNUH-KB-0050_cleaned.1.fq']	KNUH-KB-0050_cleaned_raw.cram	34586097	0.95	KNUH-KB-0050_cleaned.tsv.xz	46.25	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	770038	275	0.66	0.316468	279239	0.27489	207555	0.001738	1323	0.001439	1056	0.043227	27501	0.035302	19607	0.000345	68	8e-06	13	0.000417	205	0.000248	150
SSV-KB-0082_cleaned	SSV-KB-0082_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	45364562	39534760	87.15	['fastq_index_3/SSV-KB-0082_cleaned/SSV-KB-0082_cleaned.1.fq', 'fastq_index_3/SSV-KB-0082_cleaned/SSV-KB-0082_cleaned.2.fq']	SSV-KB-0082_cleaned_raw.cram	21342069	0.95	SSV-KB-0082_cleaned.tsv.xz	47.05	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	965493	331	0.52	0.262479	342298	0.216008	249082	0.001309	1502	0.000953	1158	0.026986	33474	0.022007	23626	0.000196	74	4e-06	10	0.000399	248	0.000174	173
CAUMC-KB-0012_cleaned	CAUMC-KB-0012_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-17	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	83370882	74680174	89.58	['output/fastq_index/CAUMC-KB-0012_cleaned/CAUMC-KB-0012_cleaned.2.fq', 'output/fastq_index/CAUMC-KB-0012_cleaned/CAUMC-KB-0012_cleaned.1.fq']	CAUMC-KB-0012_cleaned_raw.cram	29676476	0.95	CAUMC-KB-0012_cleaned.tsv.xz	35.6	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	476673	196	0.79	0.302346	179363	0.285334	139794	0.001949	785	0.001804	636	0.038463	17583	0.037557	13024	0.000283	65	0.000139	7	0.000462	147	0.000339	101
DSMC-KB-0140_cleaned	DSMC-KB-0140_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-04	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	34156592	29892303	87.52	['fastq_index_2/DSMC-KB-0140_cleaned/DSMC-KB-0140_cleaned.1.fq', 'fastq_index_2/DSMC-KB-0140_cleaned/DSMC-KB-0140_cleaned.2.fq']	DSMC-KB-0140_cleaned_raw.cram	16090408	0.95	DSMC-KB-0140_cleaned.tsv.xz	47.11	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	590561	185	0.56	0.249441	208076	0.208073	150421	0.001389	907	0.001076	683	0.026693	21553	0.021254	14869	0.000309	51	3.2e-05	8	0.000468	165	0.000201	120
SSV-KV-0109_cleaned	SSV-KV-0109_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-04	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	20822528	18401000	88.37	['fastq_index_3/SSV-KV-0109_cleaned/SSV-KV-0109_cleaned.2.fq', 'fastq_index_3/SSV-KV-0109_cleaned/SSV-KV-0109_cleaned.1.fq']	SSV-KV-0109_cleaned_raw.cram	9880827	0.95	SSV-KV-0109_cleaned.tsv.xz	47.45	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	457998	223	0.72	0.378109	175894	0.338949	135257	0.002163	812	0.001286	643	0.022419	17292	0.019781	12650	0.001844	68	3e-06	10	0.001469	146	0.000228	98
SSV00153_cleaned	SSV00153_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	32643502	29354917	89.93	['fastq_index_3/SSV00153_cleaned/SSV00153_cleaned.2.fq', 'fastq_index_3/SSV00153_cleaned/SSV00153_cleaned.1.fq']	SSV00153_cleaned_raw.cram	15720583	0.95	SSV00153_cleaned.tsv.xz	48.16	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	594587	208	0.6	0.304149	206119	0.243155	149909	0.001067	884	0.000782	710	0.039052	22040	0.028323	15429	0.000215	49	0.0	4	0.00058	147	0.000331	99
D56_cleaned	D56_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-20	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	18388982	15703889	85.4	['output/fastq_index/D56_cleaned/D56_cleaned.1.fq', 'output/fastq_index/D56_cleaned/D56_cleaned.2.fq']	D56_cleaned_raw.cram	8470376	0.95	D56_cleaned.tsv.xz	46.06	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	396778	110	0.59	0.326851	148969	0.261353	102860	0.001514	613	0.001198	426	0.027453	12905	0.020982	8103	9.4e-05	35	1.5e-05	6	0.000379	117	0.000268	86
MN_49_cleaned	MN_49_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	22104876	19235872	87.02	['fastq_index/MN_49_cleaned/MN_49_cleaned.1.fq', 'fastq_index/MN_49_cleaned/MN_49_cleaned.2.fq']	MN_49_cleaned_raw.cram	10536216	0.95	MN_49_cleaned.tsv.xz	47.66	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	579934	178	0.61	0.287894	205444	0.237573	147481	0.001443	896	0.001168	700	0.033904	21276	0.025042	14697	0.000357	40	5.7e-05	2	0.00054	146	0.000251	100
G412_cleaned	G412_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	45427154	40828076	89.88	['fastq_index/G412_cleaned/G412_cleaned.2.fq', 'fastq_index/G412_cleaned/G412_cleaned.1.fq']	G412_cleaned_raw.cram	21806309	0.95	G412_cleaned.tsv.xz	48.0	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	617812	224	0.66	0.284048	226588	0.248852	163247	0.00136	979	0.001181	744	0.039397	21208	0.029957	14797	0.000293	58	6.1e-05	12	0.000572	161	0.000288	112
SSV-KB-0121_cleaned	SSV-KB-0121_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	41231980	37581104	91.15	['fastq_index_3/SSV-KB-0121_cleaned/SSV-KB-0121_cleaned.2.fq', 'fastq_index_3/SSV-KB-0121_cleaned/SSV-KB-0121_cleaned.1.fq']	SSV-KB-0121_cleaned_raw.cram	20077410	0.95	SSV-KB-0121_cleaned.tsv.xz	48.69	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	293600	180	0.79	0.326421	116203	0.302966	86063	0.002041	510	0.001853	385	0.039142	12357	0.036291	8787	0.000232	53	0.000128	7	0.000578	91	0.000448	56
BRM00085_cleaned	BRM00085_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-17	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	45104576	40361019	89.48	['output/fastq_index/BRM00085_cleaned/BRM00085_cleaned.1.fq', 'output/fastq_index/BRM00085_cleaned/BRM00085_cleaned.2.fq']	BRM00085_cleaned_raw.cram	21634350	0.95	BRM00085_cleaned.tsv.xz	47.96	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	944311	294	0.63	0.314219	335360	0.267745	240590	0.001694	1482	0.001249	1149	0.030569	30010	0.026139	21053	0.000527	68	3e-06	11	0.000569	221	0.000263	155
R109-0_cleaned	R109-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	32466434	21944612	67.59	['fastq_index/R109-0_cleaned/R109-0_cleaned.2.fq', 'fastq_index/R109-0_cleaned/R109-0_cleaned.1.fq']	R109-0_cleaned_raw.cram	11776716	0.95	R109-0_cleaned.tsv.xz	36.27	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	390349	152	0.57	0.320467	152125	0.266415	118007	0.001468	702	0.001198	561	0.020964	12724	0.017528	9289	0.000296	53	1e-05	8	0.000458	112	0.000225	78
SNUH-KB-0102_cleaned	SNUH-KB-0102_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	13253572	11761919	88.75	['fastq_index_3/SNUH-KB-0102_cleaned/SNUH-KB-0102_cleaned.1.fq', 'fastq_index_3/SNUH-KB-0102_cleaned/SNUH-KB-0102_cleaned.2.fq']	SNUH-KB-0102_cleaned_raw.cram	6335340	0.95	SNUH-KB-0102_cleaned.tsv.xz	47.8	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	169589	52	0.63	0.31658	64586	0.270814	51428	0.001245	265	0.001068	205	0.033558	5803	0.026766	4444	0.000155	34	1e-06	6	0.000553	58	0.000419	39
R278-0_cleaned	R278-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	28558074	25197418	88.23	['fastq_index_2/R278-0_cleaned/R278-0_cleaned.2.fq', 'fastq_index_2/R278-0_cleaned/R278-0_cleaned.1.fq']	R278-0_cleaned_raw.cram	13487502	0.95	R278-0_cleaned.tsv.xz	47.23	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	669764	223	0.65	0.299895	226607	0.261336	166929	0.001514	1045	0.001165	810	0.032114	21905	0.027125	15896	0.000451	80	6e-06	12	0.000581	175	0.000305	116
G334_cleaned	G334_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	30763336	26272363	85.4	['fastq_index_4/G334_cleaned/G334_cleaned.1.fq', 'fastq_index_4/G334_cleaned/G334_cleaned.2.fq']	G334_cleaned_raw.cram	14168723	0.95	G334_cleaned.tsv.xz	46.06	2.0.22	2026-04-15	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	683078	244	0.6	0.298553	236136	0.248944	168141	0.001993	1108	0.001512	864	0.025595	22604	0.021941	15775	0.000528	43	3.2e-05	3	0.000443	160	0.000144	106
R98-0_cleaned	R98-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	41223674	35565927	86.28	['fastq_index_4/R98-0_cleaned/R98-0_cleaned.1.fq', 'fastq_index_4/R98-0_cleaned/R98-0_cleaned.2.fq']	R98-0_cleaned_raw.cram	19315843	0.95	R98-0_cleaned.tsv.xz	46.86	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	960102	332	0.56	0.298774	337414	0.245728	251835	0.001831	1546	0.001236	1247	0.023163	31529	0.019872	23135	0.00038	63	6e-06	9	0.000497	217	0.000177	160
S0302_cleaned	S0302_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	43653902	38459108	88.1	['fastq_index_3/S0302_cleaned/S0302_cleaned.2.fq', 'fastq_index_3/S0302_cleaned/S0302_cleaned.1.fq']	S0302_cleaned_raw.cram	20551396	0.95	S0302_cleaned.tsv.xz	47.08	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	823808	272	0.62	0.272112	282556	0.231404	207932	0.001376	1282	0.001073	1010	0.030471	27595	0.025161	19962	0.000232	72	2e-06	11	0.000419	201	0.000226	142
igAN_135_cleaned	igAN_135_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	12352752	10799238	87.42	['fastq_index/igAN_135_cleaned/igAN_135_cleaned.2.fq', 'fastq_index/igAN_135_cleaned/igAN_135_cleaned.1.fq']	igAN_135_cleaned_raw.cram	5907859	0.95	igAN_135_cleaned.tsv.xz	47.83	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	545824	208	0.59	0.291742	193532	0.239436	139027	0.001552	928	0.001135	705	0.031729	18477	0.025114	13012	0.000308	43	1.6e-05	4	0.000498	143	0.000247	104
control_D32_cleaned	control_D32_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-18	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	18517606	15930804	86.03	['output/fastq_index/control_D32_cleaned/control_D32_cleaned.2.fq', 'output/fastq_index/control_D32_cleaned/control_D32_cleaned.1.fq']	control_D32_cleaned_raw.cram	8789990	0.95	control_D32_cleaned.tsv.xz	47.47	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	655512	265	0.62	0.327028	241817	0.273658	176785	0.002227	1105	0.001516	857	0.026335	23116	0.020819	16118	0.000573	66	3.6e-05	13	0.000532	160	0.000235	114
S0240_cleaned	S0240_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-23	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	45057480	41159269	91.35	['fastq_index_3/S0240_cleaned/S0240_cleaned.1.fq', 'fastq_index_3/S0240_cleaned/S0240_cleaned.2.fq']	S0240_cleaned_raw.cram	21837701	0.95	S0240_cleaned.tsv.xz	48.47	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	577494	185	0.64	0.279491	205988	0.244231	145641	0.001474	867	0.000978	656	0.039719	19722	0.03332	13537	0.000664	46	0.0	6	0.00072	155	0.000389	107
S0306_cleaned	S0306_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	29923136	26941664	90.04	['fastq_index_3/S0306_cleaned/S0306_cleaned.1.fq', 'fastq_index_3/S0306_cleaned/S0306_cleaned.2.fq']	S0306_cleaned_raw.cram	14382259	0.95	S0306_cleaned.tsv.xz	48.06	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	548274	187	0.6	0.277524	191201	0.233363	141860	0.00118	798	0.000829	620	0.033055	20103	0.025731	14221	0.000339	56	1e-06	7	0.000509	146	0.000268	106
DSMC-KB-0167_cleaned	DSMC-KB-0167_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-04	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	37317154	33220189	89.02	['fastq_index_2/DSMC-KB-0167_cleaned/DSMC-KB-0167_cleaned.2.fq', 'fastq_index_2/DSMC-KB-0167_cleaned/DSMC-KB-0167_cleaned.1.fq']	DSMC-KB-0167_cleaned_raw.cram	17766120	0.95	DSMC-KB-0167_cleaned.tsv.xz	47.61	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	241092	126	0.74	0.35516	104112	0.32046	81594	0.002196	468	0.001727	364	0.0357	9034	0.032463	6713	0.000721	65	0.000146	13	0.000351	92	0.000149	61
control_1012_cleaned	control_1012_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-17	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	9841200	8564160	87.02	['output/fastq_index/control_1012_cleaned/control_1012_cleaned.2.fq', 'output/fastq_index/control_1012_cleaned/control_1012_cleaned.1.fq']	control_1012_cleaned_raw.cram	4670983	0.95	control_1012_cleaned.tsv.xz	47.46	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	710751	249	0.58	0.3173	257469	0.256431	185037	0.001632	1118	0.001262	887	0.025874	24286	0.019836	16886	0.000236	49	1e-06	6	0.000485	175	0.00028	133
G024_cleaned	G024_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-05	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	30902340	25930907	83.91	['fastq_index_2/G024_cleaned/G024_cleaned.1.fq', 'fastq_index_2/G024_cleaned/G024_cleaned.2.fq']	G024_cleaned_raw.cram	13852160	0.95	G024_cleaned.tsv.xz	44.83	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	877911	328	0.54	0.266404	302177	0.212145	217641	0.001653	1390	0.001183	1141	0.024941	29000	0.018811	20215	0.000331	46	3e-05	4	0.00042	172	0.000149	122
R50-0_cleaned	R50-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	36482126	31886828	87.4	['fastq_index_4/R50-0_cleaned/R50-0_cleaned.1.fq', 'fastq_index_4/R50-0_cleaned/R50-0_cleaned.2.fq']	R50-0_cleaned_raw.cram	17281241	0.95	R50-0_cleaned.tsv.xz	47.37	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	594654	221	0.67	0.370046	218965	0.328855	159655	0.001794	992	0.001375	746	0.027821	20829	0.02305	14490	0.000425	60	0.000189	13	0.000403	168	0.000228	116
DSMC-KB-0032_cleaned	DSMC-KB-0032_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-22	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	6065850	5567546	91.79	['output/fastq_index/DSMC-KB-0032_cleaned/DSMC-KB-0032_cleaned.2.fq', 'output/fastq_index/DSMC-KB-0032_cleaned/DSMC-KB-0032_cleaned.1.fq']	DSMC-KB-0032_cleaned_raw.cram	2956487	0.95	DSMC-KB-0032_cleaned.tsv.xz	48.74	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	199855	78	0.68	0.286282	74124	0.255202	58864	0.001457	317	0.00097	246	0.045039	8868	0.039042	6696	0.000204	32	1.4e-05	5	0.000474	56	0.000323	41
S0204_cleaned	S0204_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-04	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	46162790	38857372	84.17	['fastq_index_4/S0204_cleaned/S0204_cleaned.2.fq', 'fastq_index_4/S0204_cleaned/S0204_cleaned.1.fq']	S0204_cleaned_raw.cram	20731661	0.95	S0204_cleaned.tsv.xz	44.91	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	700747	236	0.63	0.298881	250929	0.253852	185934	0.001656	1141	0.001187	871	0.027008	23554	0.023311	16771	0.00031	70	1.7e-05	9	0.00041	193	0.000207	139
G313_cleaned	G313_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-06	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	35907664	30787141	85.74	['fastq_index_2/G313_cleaned/G313_cleaned.2.fq', 'fastq_index_2/G313_cleaned/G313_cleaned.1.fq']	G313_cleaned_raw.cram	16469428	0.95	G313_cleaned.tsv.xz	45.87	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	840269	307	0.54	0.264943	288163	0.219021	207171	0.001448	1356	0.00117	1079	0.023366	28140	0.018532	19372	0.000202	45	1e-05	2	0.000416	168	0.000156	125
BRMH-KB-0056_cleaned	BRMH-KB-0056_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-13	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	42439090	37581828	88.55	['fastq_index_1/BRMH-KB-0056_cleaned/BRMH-KB-0056_cleaned.1.fq', 'fastq_index_1/BRMH-KB-0056_cleaned/BRMH-KB-0056_cleaned.2.fq']	BRMH-KB-0056_cleaned_raw.cram	20159104	0.95	BRMH-KB-0056_cleaned.tsv.xz	47.5	2.0.22	2026-04-15	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	576768	184	0.6	0.274713	209479	0.227942	152602	0.001345	879	0.001145	683	0.030652	20481	0.023344	14287	0.000292	50	6.1e-05	7	0.000463	167	0.000225	126
G364_cleaned	G364_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-06	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	29937024	27214567	90.91	['fastq_index_2/G364_cleaned/G364_cleaned.2.fq', 'fastq_index_2/G364_cleaned/G364_cleaned.1.fq']	G364_cleaned_raw.cram	14528218	0.95	G364_cleaned.tsv.xz	48.53	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	540530	176	0.66	0.323834	195714	0.279988	143100	0.001296	848	0.001059	661	0.043219	20416	0.034783	14151	0.00031	48	1.5e-05	8	0.000577	132	0.000388	98
BRM00103_cleaned	BRM00103_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-17	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	23652568	21495872	90.88	['output/fastq_index/BRM00103_cleaned/BRM00103_cleaned.2.fq', 'output/fastq_index/BRM00103_cleaned/BRM00103_cleaned.1.fq']	BRM00103_cleaned_raw.cram	11438128	0.95	BRM00103_cleaned.tsv.xz	48.36	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	413926	156	0.63	0.264117	147054	0.227655	107886	0.001065	585	0.000734	463	0.039303	14814	0.033211	10368	0.000205	34	2e-06	4	0.000577	129	0.000323	97
R333-0_cleaned	R333-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	21934738	19180920	87.45	['fastq_index_3/R333-0_cleaned/R333-0_cleaned.1.fq', 'fastq_index_3/R333-0_cleaned/R333-0_cleaned.2.fq']	R333-0_cleaned_raw.cram	10323435	0.95	R333-0_cleaned.tsv.xz	47.06	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	583504	184	0.62	0.297841	207139	0.249216	155888	0.001331	916	0.001074	710	0.039004	21095	0.030604	15392	0.000204	45	1.6e-05	4	0.000445	153	0.000273	112
R285-0_cleaned	R285-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	23648054	20096416	84.98	['fastq_index_2/R285-0_cleaned/R285-0_cleaned.1.fq', 'fastq_index_2/R285-0_cleaned/R285-0_cleaned.2.fq']	R285-0_cleaned_raw.cram	10827597	0.95	R285-0_cleaned.tsv.xz	45.79	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	395051	141	0.51	0.288112	143195	0.22268	110035	0.001828	658	0.001258	508	0.021118	11549	0.016242	8769	0.000254	47	0.0	1	0.000458	116	0.000211	80
R337-0_cleaned	R337-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	19924164	18197435	91.33	['fastq_index_3/R337-0_cleaned/R337-0_cleaned.1.fq', 'fastq_index_3/R337-0_cleaned/R337-0_cleaned.2.fq']	R337-0_cleaned_raw.cram	9670772	0.95	R337-0_cleaned.tsv.xz	48.54	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	229636	88	0.62	0.33935	87392	0.271474	65887	0.001407	384	0.00105	293	0.040494	7814	0.026135	5517	0.000181	36	9e-06	4	0.000571	68	0.000331	47
G471_cleaned	G471_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	12230802	9671773	79.08	['fastq_index/G471_cleaned/G471_cleaned.1.fq', 'fastq_index/G471_cleaned/G471_cleaned.2.fq']	G471_cleaned_raw.cram	5395361	0.95	G471_cleaned.tsv.xz	44.11	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	251820	83	0.67	0.297405	91808	0.259891	71257	0.002104	444	0.001402	338	0.030743	7021	0.026102	5378	0.000672	52	3e-06	6	0.000358	88	0.000106	52
R287-0_cleaned	R287-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	21726712	19157088	88.17	['fastq_index_2/R287-0_cleaned/R287-0_cleaned.2.fq', 'fastq_index_2/R287-0_cleaned/R287-0_cleaned.1.fq']	R287-0_cleaned_raw.cram	10276734	0.95	R287-0_cleaned.tsv.xz	47.3	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	644800	265	0.63	0.294068	236410	0.251788	178573	0.001465	1160	0.001152	956	0.033036	21322	0.026237	15475	0.000282	40	9e-06	5	0.000504	160	0.000278	118
S0314_cleaned	S0314_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	36600412	33212764	90.74	['fastq_index_3/S0314_cleaned/S0314_cleaned.2.fq', 'fastq_index_3/S0314_cleaned/S0314_cleaned.1.fq']	S0314_cleaned_raw.cram	17656725	0.95	S0314_cleaned.tsv.xz	48.24	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	461084	149	0.64	0.311186	170892	0.271529	130890	0.001391	760	0.001065	594	0.040959	17296	0.032725	12154	0.000261	65	2.4e-05	15	0.00051	123	0.000333	92
DSM00212_cleaned	DSM00212_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-21	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	14720120	11898309	80.83	['output/fastq_index/DSM00212_cleaned/DSM00212_cleaned.1.fq', 'output/fastq_index/DSM00212_cleaned/DSM00212_cleaned.2.fq']	DSM00212_cleaned_raw.cram	4701965	0.95	DSM00212_cleaned.tsv.xz	31.94	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	384776	156	0.5	0.299198	150245	0.239246	109819	0.001306	681	0.000866	501	0.019782	13247	0.01451	9286	0.00045	70	2.2e-05	9	0.000566	125	0.000308	87
S0004_cleaned	S0004_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	36727870	32343868	88.06	['fastq_index_4/S0004_cleaned/S0004_cleaned.2.fq', 'fastq_index_4/S0004_cleaned/S0004_cleaned.1.fq']	S0004_cleaned_raw.cram	17271534	0.95	S0004_cleaned.tsv.xz	47.03	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	619831	220	0.66	0.309212	221247	0.267843	156358	0.001978	908	0.001644	703	0.026916	20439	0.022703	13574	0.000341	56	1.4e-05	6	0.000256	166	0.000142	109
R345-0_cleaned	R345-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	22543850	20266401	89.9	['fastq_index_4/R345-0_cleaned/R345-0_cleaned.1.fq', 'fastq_index_4/R345-0_cleaned/R345-0_cleaned.2.fq']	R345-0_cleaned_raw.cram	10904365	0.95	R345-0_cleaned.tsv.xz	48.37	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	484719	147	0.5	0.265593	169623	0.213494	129441	0.001659	721	0.000825	573	0.027494	16609	0.022107	12470	0.000636	52	6e-06	3	0.000546	139	0.000249	97
KNUH-KB-0016_cleaned	KNUH-KB-0016_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	25391396	23003625	90.6	['fastq_index/KNUH-KB-0016_cleaned/KNUH-KB-0016_cleaned.1.fq', 'fastq_index/KNUH-KB-0016_cleaned/KNUH-KB-0016_cleaned.2.fq']	KNUH-KB-0016_cleaned_raw.cram	12280483	0.95	KNUH-KB-0016_cleaned.tsv.xz	48.36	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	695255	201	0.54	0.296672	236348	0.23401	163189	0.001572	1068	0.001116	811	0.029733	21638	0.023264	15045	0.000184	32	3e-06	3	0.000473	154	0.000242	114
DSMC-KB-0059_cleaned	DSMC-KB-0059_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	14790480	12475461	84.35	['fastq_index_1/DSMC-KB-0059_cleaned/DSMC-KB-0059_cleaned.2.fq', 'fastq_index_1/DSMC-KB-0059_cleaned/DSMC-KB-0059_cleaned.1.fq']	DSMC-KB-0059_cleaned_raw.cram	6847428	0.95	DSMC-KB-0059_cleaned.tsv.xz	46.3	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	777993	288	0.58	0.334217	285673	0.277756	209843	0.002173	1385	0.00166	1126	0.021428	26041	0.017603	18420	0.000375	52	2.1e-05	8	0.000407	170	0.000173	123
G390_cleaned	G390_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-07	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	4961424	4453032	89.75	['fastq_index_2/G390_cleaned/G390_cleaned.2.fq', 'fastq_index_2/G390_cleaned/G390_cleaned.1.fq']	G390_cleaned_raw.cram	2372245	0.95	G390_cleaned.tsv.xz	47.81	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	350030	153	0.55	0.273855	132091	0.224611	98720	0.001303	608	0.001055	486	0.028196	13761	0.022136	9933	0.000266	46	4e-06	7	0.000575	102	0.000251	71
igAN_140_cleaned	igAN_140_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	11002004	9455947	85.95	['fastq_index/igAN_140_cleaned/igAN_140_cleaned.1.fq', 'fastq_index/igAN_140_cleaned/igAN_140_cleaned.2.fq']	igAN_140_cleaned_raw.cram	5228425	0.95	igAN_140_cleaned.tsv.xz	47.52	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	505395	185	0.61	0.305269	184275	0.254102	128263	0.001573	816	0.001232	641	0.028946	18064	0.022649	12215	0.000352	51	1.6e-05	4	0.000483	128	0.000192	86
G401_cleaned	G401_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-23	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	40267670	36338525	90.24	['fastq_index/G401_cleaned/G401_cleaned.1.fq', 'fastq_index/G401_cleaned/G401_cleaned.2.fq']	G401_cleaned_raw.cram	19367916	0.95	G401_cleaned.tsv.xz	48.1	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	518142	194	0.6	0.28245	193458	0.229039	142581	0.001061	798	0.000671	615	0.035749	18333	0.027839	12699	0.000384	63	1e-06	6	0.000609	151	0.000335	114
R36-0_cleaned	R36-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	27919136	24931765	89.3	['fastq_index_4/R36-0_cleaned/R36-0_cleaned.2.fq', 'fastq_index_4/R36-0_cleaned/R36-0_cleaned.1.fq']	R36-0_cleaned_raw.cram	13418491	0.95	R36-0_cleaned.tsv.xz	48.06	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	613816	235	0.61	0.300222	218607	0.24925	166344	0.001707	1001	0.001273	812	0.031153	23242	0.024302	17336	0.000261	57	2.9e-05	9	0.000418	164	0.000214	123
control_D24_cleaned	control_D24_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-18	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	14937242	13092938	87.65	['output/fastq_index/control_D24_cleaned/control_D24_cleaned.1.fq', 'output/fastq_index/control_D24_cleaned/control_D24_cleaned.2.fq']	control_D24_cleaned_raw.cram	7105791	0.95	control_D24_cleaned.tsv.xz	47.57	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	663554	242	0.6	0.2826	230389	0.241175	167428	0.001297	1048	0.001004	841	0.031373	23142	0.025946	16424	0.000265	31	3e-06	1	0.000524	146	0.000255	110
DSMC-KB-0116_cleaned	DSMC-KB-0116_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	46273150	40774915	88.12	['fastq_index_2/DSMC-KB-0116_cleaned/DSMC-KB-0116_cleaned.1.fq', 'fastq_index_2/DSMC-KB-0116_cleaned/DSMC-KB-0116_cleaned.2.fq']	DSMC-KB-0116_cleaned_raw.cram	21854905	0.95	DSMC-KB-0116_cleaned.tsv.xz	47.23	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	967370	338	0.58	0.282371	330201	0.232469	239183	0.001634	1540	0.001239	1220	0.028198	31002	0.021332	21837	0.000425	63	5.3e-05	8	0.000495	210	0.000204	153
G374_cleaned	G374_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-07	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	41511968	35120818	84.6	['fastq_index_2/G374_cleaned/G374_cleaned.2.fq', 'fastq_index_2/G374_cleaned/G374_cleaned.1.fq']	G374_cleaned_raw.cram	18768492	0.95	G374_cleaned.tsv.xz	45.21	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	847415	282	0.57	0.277592	300267	0.232123	212974	0.001666	1372	0.00127	1068	0.02518	28164	0.020015	19221	0.000296	82	3.9e-05	19	0.000396	181	0.000121	118
G419_cleaned	G419_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	31541016	28281181	89.66	['fastq_index/G419_cleaned/G419_cleaned.2.fq', 'fastq_index/G419_cleaned/G419_cleaned.1.fq']	G419_cleaned_raw.cram	15116644	0.95	G419_cleaned.tsv.xz	47.93	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	280636	140	0.68	0.3802	109817	0.321589	84108	0.00392	504	0.001159	391	0.020838	11390	0.017312	8130	0.003604	67	1.9e-05	7	0.001736	82	0.00045	47
S0077_cleaned	S0077_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	52593918	46760179	88.91	['fastq_index_3/S0077_cleaned/S0077_cleaned.2.fq', 'fastq_index_3/S0077_cleaned/S0077_cleaned.1.fq']	S0077_cleaned_raw.cram	24980130	0.95	S0077_cleaned.tsv.xz	47.5	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	910814	315	0.61	0.292952	316057	0.24844	226466	0.001326	1362	0.001066	1080	0.027077	29253	0.022135	20647	0.000251	63	1.7e-05	11	0.000467	210	0.000276	151
KNUH-KB-0062_cleaned	KNUH-KB-0062_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	64913864	57160733	88.06	['fastq_index_4/KNUH-KB-0062_cleaned/KNUH-KB-0062_cleaned.2.fq', 'fastq_index_4/KNUH-KB-0062_cleaned/KNUH-KB-0062_cleaned.1.fq']	KNUH-KB-0062_cleaned_raw.cram	30677850	0.95	KNUH-KB-0062_cleaned.tsv.xz	47.26	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	855228	290	0.7	0.397156	306249	0.341504	224161	0.002407	1310	0.001359	1008	0.018077	28682	0.015213	20090	0.001661	69	0.000179	10	0.001728	239	0.000751	169
R319-0_cleaned	R319-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	27942396	25140706	89.97	['fastq_index_3/R319-0_cleaned/R319-0_cleaned.2.fq', 'fastq_index_3/R319-0_cleaned/R319-0_cleaned.1.fq']	R319-0_cleaned_raw.cram	13446720	0.95	R319-0_cleaned.tsv.xz	48.12	2.0.22	2026-04-15	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	413447	166	0.75	0.35665	149379	0.326768	116531	0.001266	680	0.001108	548	0.045411	16786	0.04161	12743	0.000132	48	2e-06	5	0.000587	119	0.00042	84
R58-0_cleaned	R58-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	15837236	10465773	66.08	['fastq_index_4/R58-0_cleaned/R58-0_cleaned.1.fq', 'fastq_index_4/R58-0_cleaned/R58-0_cleaned.2.fq']	R58-0_cleaned_raw.cram	5640173	0.95	R58-0_cleaned.tsv.xz	35.61	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	396177	177	0.55	0.290444	148608	0.233317	116113	0.00137	657	0.00097	527	0.026765	14146	0.021216	10635	0.000277	52	5e-06	11	0.000465	122	0.000276	89
BRMH-KB-0009_cleaned	BRMH-KB-0009_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-17	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	41711888	36834690	88.31	['output/fastq_index/BRMH-KB-0009_cleaned/BRMH-KB-0009_cleaned.2.fq', 'output/fastq_index/BRMH-KB-0009_cleaned/BRMH-KB-0009_cleaned.1.fq']	BRMH-KB-0009_cleaned_raw.cram	19716395	0.95	BRMH-KB-0009_cleaned.tsv.xz	47.27	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	516769	190	0.62	0.313127	194233	0.264372	140078	0.001587	834	0.001191	644	0.038382	18143	0.030911	12658	0.000372	59	1e-06	13	0.000516	146	0.000257	105
DSMC-KB-0011_cleaned	DSMC-KB-0011_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-22	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	18766470	15072777	80.32	['output/fastq_index/DSMC-KB-0011_cleaned/DSMC-KB-0011_cleaned.1.fq', 'output/fastq_index/DSMC-KB-0011_cleaned/DSMC-KB-0011_cleaned.2.fq']	DSMC-KB-0011_cleaned_raw.cram	8319564	0.95	DSMC-KB-0011_cleaned.tsv.xz	44.33	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	660551	252	0.56	0.240962	229278	0.203155	167186	0.001332	1083	0.00107	863	0.027123	23364	0.02235	16629	0.000221	48	1.5e-05	6	0.000349	141	0.000121	102
G221_cleaned	G221_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-05	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	12626864	10264272	81.29	['fastq_index_2/G221_cleaned/G221_cleaned.1.fq', 'fastq_index_2/G221_cleaned/G221_cleaned.2.fq']	G221_cleaned_raw.cram	5690995	0.95	G221_cleaned.tsv.xz	45.07	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	285682	95	0.65	0.316176	114404	0.266036	82329	0.001367	513	0.001015	377	0.042336	9315	0.033817	6299	0.000265	49	7e-06	5	0.000629	104	0.000394	63
SSV00150_cleaned	SSV00150_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	88450318	76624738	86.63	['fastq_index_3/SSV00150_cleaned/SSV00150_cleaned.1.fq', 'fastq_index_3/SSV00150_cleaned/SSV00150_cleaned.2.fq']	SSV00150_cleaned_raw.cram	30531411	0.95	SSV00150_cleaned.tsv.xz	34.52	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	1114587	385	0.52	0.284512	388211	0.217617	278670	0.001373	1737	0.001013	1365	0.024352	37960	0.017957	25962	0.000223	77	2.8e-05	14	0.000395	243	0.00021	177
DSM00294_cleaned	DSM00294_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-22	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	70532648	61014319	86.51	['output/fastq_index/DSM00294_cleaned/DSM00294_cleaned.1.fq', 'output/fastq_index/DSM00294_cleaned/DSM00294_cleaned.2.fq']	DSM00294_cleaned_raw.cram	32838822	0.95	DSM00294_cleaned.tsv.xz	46.56	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	1178925	366	0.56	0.274789	399649	0.224183	281295	0.001416	1773	0.001024	1374	0.027765	37299	0.02299	25577	0.000226	56	7e-06	7	0.000464	266	0.000192	188
R290-0_cleaned	R290-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	20533516	18084456	88.07	['fastq_index_2/R290-0_cleaned/R290-0_cleaned.1.fq', 'fastq_index_2/R290-0_cleaned/R290-0_cleaned.2.fq']	R290-0_cleaned_raw.cram	9750336	0.95	R290-0_cleaned.tsv.xz	47.48	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	526784	207	0.73	0.307822	191305	0.275218	143023	0.001891	836	0.001585	673	0.034768	18106	0.031859	13115	0.000278	39	5.3e-05	4	0.000487	140	0.000239	96
S0159_cleaned	S0159_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	23940774	21390054	89.35	['fastq_index_4/S0159_cleaned/S0159_cleaned.1.fq', 'fastq_index_4/S0159_cleaned/S0159_cleaned.2.fq']	S0159_cleaned_raw.cram	11440966	0.95	S0159_cleaned.tsv.xz	47.79	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	579067	207	0.58	0.270816	205171	0.226202	144709	0.001436	922	0.001099	693	0.031026	20545	0.024058	13964	0.00029	58	2.6e-05	7	0.000543	170	0.000257	114
DSMC-KB-0089_cleaned	DSMC-KB-0089_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-23	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	49384898	44096823	89.29	['fastq_index_2/DSMC-KB-0089_cleaned/DSMC-KB-0089_cleaned.2.fq', 'fastq_index_2/DSMC-KB-0089_cleaned/DSMC-KB-0089_cleaned.1.fq']	DSMC-KB-0089_cleaned_raw.cram	23397995	0.95	DSMC-KB-0089_cleaned.tsv.xz	47.38	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	402840	168	0.73	0.328005	151352	0.299074	122218	0.001728	658	0.001451	550	0.043814	15582	0.038592	11661	0.000305	52	9.1e-05	9	0.000462	113	0.000314	82
G407_cleaned	G407_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	49827302	43799543	87.9	['fastq_index_4/G407_cleaned/G407_cleaned.1.fq', 'fastq_index_4/G407_cleaned/G407_cleaned.2.fq']	G407_cleaned_raw.cram	23387861	0.95	G407_cleaned.tsv.xz	46.94	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	984178	341	0.55	0.269627	335015	0.216667	243543	0.001329	1514	0.000995	1232	0.030082	31716	0.022856	22690	0.000244	50	9e-06	9	0.000514	220	0.00023	156
D92_cleaned	D92_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-21	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	27144504	23866520	87.92	['output/fastq_index/D92_cleaned/D92_cleaned.2.fq', 'output/fastq_index/D92_cleaned/D92_cleaned.1.fq']	D92_cleaned_raw.cram	12928975	0.95	D92_cleaned.tsv.xz	47.63	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	547463	210	0.62	0.273818	186643	0.234803	134786	0.001521	874	0.001148	673	0.033065	19339	0.025354	13324	0.000547	55	4.6e-05	5	0.000467	132	0.000196	88
G416_cleaned	G416_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	37310680	33482280	89.74	['fastq_index/G416_cleaned/G416_cleaned.1.fq', 'fastq_index/G416_cleaned/G416_cleaned.2.fq']	G416_cleaned_raw.cram	17839503	0.95	G416_cleaned.tsv.xz	47.81	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	661089	241	0.59	0.279863	228856	0.231324	167192	0.001112	1027	0.000883	810	0.032184	22831	0.024352	16332	0.000236	48	0.0	2	0.000534	172	0.000286	122
S0093_cleaned	S0093_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-15	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	46396636	41755225	90.0	['fastq_index_3/S0093_cleaned/S0093_cleaned.1.fq', 'fastq_index_3/S0093_cleaned/S0093_cleaned.2.fq']	S0093_cleaned_raw.cram	22346265	0.95	S0093_cleaned.tsv.xz	48.16	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	590764	204	0.52	0.254492	211954	0.215378	156255	0.001093	918	0.000901	732	0.026624	20081	0.022626	14073	0.000148	54	8e-06	8	0.000427	166	0.000294	120
SSV-KB-0085_cleaned	SSV-KB-0085_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	34596958	29159581	84.28	['fastq_index_3/SSV-KB-0085_cleaned/SSV-KB-0085_cleaned.2.fq', 'fastq_index_3/SSV-KB-0085_cleaned/SSV-KB-0085_cleaned.1.fq']	SSV-KB-0085_cleaned_raw.cram	15850510	0.95	SSV-KB-0085_cleaned.tsv.xz	45.81	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	666285	326	0.69	0.355913	248945	0.313366	193397	0.002595	1205	0.001718	965	0.029641	25470	0.025615	18853	0.001113	83	9.2e-05	12	0.000988	171	0.000407	117
D117_cleaned	D117_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-18	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	28306480	25349694	89.55	['output/fastq_index/D117_cleaned/D117_cleaned.1.fq', 'output/fastq_index/D117_cleaned/D117_cleaned.2.fq']	D117_cleaned_raw.cram	13640627	0.95	D117_cleaned.tsv.xz	48.19	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	476586	176	0.64	0.276256	172027	0.240385	125147	0.001254	776	0.001011	598	0.037244	17946	0.028323	12826	0.000385	45	5.6e-05	6	0.000474	132	0.000185	98
DSM00298_cleaned	DSM00298_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-22	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	792402	708043	89.35	['output/fastq_index/DSM00298_cleaned/DSM00298_cleaned.2.fq', 'output/fastq_index/DSM00298_cleaned/DSM00298_cleaned.1.fq']	DSM00298_cleaned_raw.cram	383504	0.95	DSM00298_cleaned.tsv.xz	48.4	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	151094	78	0.57	0.292312	56523	0.238809	41402	0.001339	251	0.000949	176	0.034118	6528	0.027649	4681	0.000387	29	2e-06	1	0.000453	48	0.000261	31
DMN_G215_cleaned	DMN_G215_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	13347694	11267830	84.42	['fastq_index_1/DMN_G215_cleaned/DMN_G215_cleaned.1.fq', 'fastq_index_1/DMN_G215_cleaned/DMN_G215_cleaned.2.fq']	DMN_G215_cleaned_raw.cram	6198833	0.95	DMN_G215_cleaned.tsv.xz	46.44	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	641892	253	0.54	0.292184	230990	0.229918	172390	0.001663	1070	0.001279	863	0.022273	21651	0.017496	15988	0.000344	57	1.2e-05	10	0.0004	154	0.000152	108
G393_cleaned	G393_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	52249486	45918489	87.88	['fastq_index_4/G393_cleaned/G393_cleaned.1.fq', 'fastq_index_4/G393_cleaned/G393_cleaned.2.fq']	G393_cleaned_raw.cram	24601857	0.95	G393_cleaned.tsv.xz	47.09	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	524495	181	0.67	0.346112	197232	0.305873	147499	0.001853	946	0.00162	749	0.03231	16613	0.027508	11789	0.000264	61	0.000123	17	0.000362	148	0.000248	105
CAUMC-KB-0006_cleaned	CAUMC-KB-0006_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-17	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	43953476	38912215	88.53	['output/fastq_index/CAUMC-KB-0006_cleaned/CAUMC-KB-0006_cleaned.1.fq', 'output/fastq_index/CAUMC-KB-0006_cleaned/CAUMC-KB-0006_cleaned.2.fq']	CAUMC-KB-0006_cleaned_raw.cram	20852712	0.95	CAUMC-KB-0006_cleaned.tsv.xz	47.44	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	346942	135	0.79	0.357126	137050	0.326962	104955	0.001949	606	0.001804	459	0.043161	12752	0.040586	9338	0.000194	70	6.3e-05	11	0.000512	107	0.000402	71
G231_cleaned	G231_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-05	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	26869830	23784826	88.52	['fastq_index_2/G231_cleaned/G231_cleaned.2.fq', 'fastq_index_2/G231_cleaned/G231_cleaned.1.fq']	G231_cleaned_raw.cram	12821640	0.95	G231_cleaned.tsv.xz	47.72	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	568443	194	0.63	0.292916	200271	0.25338	141220	0.001937	891	0.001456	678	0.030906	17708	0.025636	11921	0.000629	65	3.6e-05	11	0.000302	148	0.000121	99
G398_cleaned	G398_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-07	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	39277320	34303917	87.34	['fastq_index_2/G398_cleaned/G398_cleaned.2.fq', 'fastq_index_2/G398_cleaned/G398_cleaned.1.fq']	G398_cleaned_raw.cram	18179104	0.95	G398_cleaned.tsv.xz	46.28	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	407706	165	0.55	0.254243	146379	0.211759	109650	0.00119	648	0.000845	528	0.0374	16079	0.030337	11851	0.000421	43	2e-06	4	0.000506	102	0.000274	79
R221-0_cleaned	R221-0_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-13	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	16632018	14841262	89.23	['fastq_index_2/R221-0_cleaned/R221-0_cleaned.2.fq', 'fastq_index_2/R221-0_cleaned/R221-0_cleaned.1.fq']	R221-0_cleaned_raw.cram	7940385	0.95	R221-0_cleaned.tsv.xz	47.74	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	413606	152	0.61	0.311996	155147	0.264858	121322	0.001248	706	0.001061	579	0.042425	14984	0.032656	11306	0.000163	48	2e-05	14	0.000421	121	0.000315	86
R51-0_cleaned	R51-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	30896280	23377550	75.66	['fastq_index_4/R51-0_cleaned/R51-0_cleaned.1.fq', 'fastq_index_4/R51-0_cleaned/R51-0_cleaned.2.fq']	R51-0_cleaned_raw.cram	12658657	0.95	R51-0_cleaned.tsv.xz	40.97	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	1066722	438	0.6	0.322558	382810	0.265262	284867	0.002066	1907	0.001542	1546	0.020433	32253	0.017348	23876	0.000322	56	5e-06	7	0.000368	196	0.00013	134
control_1006_cleaned	control_1006_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-17	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	13074140	11596624	88.7	['output/fastq_index/control_1006_cleaned/control_1006_cleaned.1.fq', 'output/fastq_index/control_1006_cleaned/control_1006_cleaned.2.fq']	control_1006_cleaned_raw.cram	6315338	0.95	control_1006_cleaned.tsv.xz	48.3	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	295923	119	0.61	0.273488	109050	0.230775	81391	0.001274	449	0.00097	361	0.037891	12566	0.028519	8611	0.000338	33	5.8e-05	3	0.000458	94	0.000262	66
DSMC-KB-0138_cleaned	DSMC-KB-0138_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-04	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	35525220	32097021	90.35	['fastq_index_2/DSMC-KB-0138_cleaned/DSMC-KB-0138_cleaned.1.fq', 'fastq_index_2/DSMC-KB-0138_cleaned/DSMC-KB-0138_cleaned.2.fq']	DSMC-KB-0138_cleaned_raw.cram	17181416	0.95	DSMC-KB-0138_cleaned.tsv.xz	48.36	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	497162	173	0.58	0.267133	174165	0.22357	127550	0.001529	765	0.000988	573	0.038443	16773	0.029963	11737	0.000746	49	6e-06	4	0.00064	141	0.000275	99
R72-0_cleaned	R72-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	27518148	24693077	89.73	['fastq_index_4/R72-0_cleaned/R72-0_cleaned.1.fq', 'fastq_index_4/R72-0_cleaned/R72-0_cleaned.2.fq']	R72-0_cleaned_raw.cram	13270314	0.95	R72-0_cleaned.tsv.xz	48.22	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	476347	183	0.59	0.300027	172990	0.243571	128956	0.001222	743	0.000945	561	0.038024	16343	0.029507	11967	0.000218	47	0.0	2	0.000549	124	0.000312	92
DSMC-KB-0110_cleaned	DSMC-KB-0110_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	23181952	20781064	89.64	['fastq_index_2/DSMC-KB-0110_cleaned/DSMC-KB-0110_cleaned.2.fq', 'fastq_index_2/DSMC-KB-0110_cleaned/DSMC-KB-0110_cleaned.1.fq']	DSMC-KB-0110_cleaned_raw.cram	11118310	0.95	DSMC-KB-0110_cleaned.tsv.xz	47.96	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	341728	150	0.54	0.221781	122733	0.191142	90980	0.000899	498	0.000715	392	0.029126	12759	0.023678	9016	0.000209	50	1e-06	6	0.0004	100	0.000261	70
SSV-KV-0107_cleaned	SSV-KV-0107_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	45652928	39628174	86.8	['fastq_index_3/SSV-KV-0107_cleaned/SSV-KV-0107_cleaned.2.fq', 'fastq_index_3/SSV-KV-0107_cleaned/SSV-KV-0107_cleaned.1.fq']	SSV-KV-0107_cleaned_raw.cram	21368323	0.95	SSV-KV-0107_cleaned.tsv.xz	46.81	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	1076851	364	0.65	0.313067	375711	0.272498	274241	0.001916	1702	0.001463	1361	0.023339	34240	0.020111	24097	0.000361	73	1e-06	10	0.00047	255	0.000223	185
G336_cleaned	G336_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-06	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	26205682	23856373	91.04	['fastq_index_2/G336_cleaned/G336_cleaned.1.fq', 'fastq_index_2/G336_cleaned/G336_cleaned.2.fq']	G336_cleaned_raw.cram	12732878	0.95	G336_cleaned.tsv.xz	48.59	2.0.22	2026-04-08	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	550385	216	0.61	0.295931	201819	0.246299	148446	0.001345	907	0.001056	702	0.040312	17425	0.030413	11928	0.000137	46	7e-06	11	0.000568	139	0.000342	100
R21-0_cleaned	R21-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	72871320	65980083	90.54	['fastq_index_4/R21-0_cleaned/R21-0_cleaned.1.fq', 'fastq_index_4/R21-0_cleaned/R21-0_cleaned.2.fq']	R21-0_cleaned_raw.cram	35541823	0.95	R21-0_cleaned.tsv.xz	48.77	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	807325	286	0.61	0.293631	276554	0.249139	199775	0.001283	1199	0.000995	936	0.041572	27669	0.033866	19762	0.000408	63	5e-06	8	0.000458	199	0.000279	142
DSMC-KB-0015_cleaned	DSMC-KB-0015_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-22	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	16395370	14479831	88.32	['output/fastq_index/DSMC-KB-0015_cleaned/DSMC-KB-0015_cleaned.1.fq', 'output/fastq_index/DSMC-KB-0015_cleaned/DSMC-KB-0015_cleaned.2.fq']	DSMC-KB-0015_cleaned_raw.cram	7877577	0.95	DSMC-KB-0015_cleaned.tsv.xz	48.05	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	327002	120	0.63	0.292093	116491	0.2577	87369	0.001355	503	0.001075	392	0.040658	14642	0.033377	10428	0.000246	25	2.9e-05	1	0.000707	92	0.000283	68
R10-0_cleaned	R10-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-02	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	37960370	31934417	84.13	['fastq_index/R10-0_cleaned/R10-0_cleaned.1.fq', 'fastq_index/R10-0_cleaned/R10-0_cleaned.2.fq']	R10-0_cleaned_raw.cram	17152968	0.95	R10-0_cleaned.tsv.xz	45.19	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	866678	314	0.57	0.310895	310814	0.257516	229545	0.001802	1468	0.001436	1196	0.020094	28397	0.016131	20604	0.000191	65	1e-06	9	0.000442	234	0.000215	160
D99_cleaned	D99_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-21	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	9248304	6637068	71.77	['output/fastq_index/D99_cleaned/D99_cleaned.1.fq', 'output/fastq_index/D99_cleaned/D99_cleaned.2.fq']	D99_cleaned_raw.cram	3604849	0.95	D99_cleaned.tsv.xz	38.98	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	315816	110	0.57	0.305534	122525	0.246757	86404	0.002076	556	0.000999	420	0.026919	11502	0.020972	7540	0.000969	61	2e-06	7	0.000451	102	0.000311	73
G254_cleaned	G254_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	40775672	35983388	88.25	['fastq_index_4/G254_cleaned/G254_cleaned.1.fq', 'fastq_index_4/G254_cleaned/G254_cleaned.2.fq']	G254_cleaned_raw.cram	19283553	0.95	G254_cleaned.tsv.xz	47.29	2.0.22	2026-04-15	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	708084	237	0.61	0.27894	245643	0.239337	177357	0.001273	1127	0.000967	879	0.030373	23406	0.024864	16477	0.000396	59	1.4e-05	3	0.000489	163	0.000276	117
DSMC-KB-0068_cleaned	DSMC-KB-0068_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-23	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	36036376	31479639	87.36	['output/fastq_index/DSMC-KB-0068_cleaned/DSMC-KB-0068_cleaned.1.fq', 'output/fastq_index/DSMC-KB-0068_cleaned/DSMC-KB-0068_cleaned.2.fq']	DSMC-KB-0068_cleaned_raw.cram	16945675	0.95	DSMC-KB-0068_cleaned.tsv.xz	47.02	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	978384	304	0.57	0.311859	342007	0.250063	246942	0.001775	1546	0.001285	1235	0.02157	31767	0.016979	22232	0.000293	69	1.4e-05	11	0.000508	230	0.000233	162
DSM00277_cleaned	DSM00277_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-22	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	35815754	32171130	89.82	['output/fastq_index/DSM00277_cleaned/DSM00277_cleaned.1.fq', 'output/fastq_index/DSM00277_cleaned/DSM00277_cleaned.2.fq']	DSM00277_cleaned_raw.cram	17070874	0.95	DSM00277_cleaned.tsv.xz	47.66	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	718703	260	0.58	0.254243	254830	0.217383	185552	0.001175	1160	0.000912	905	0.031477	24584	0.027503	17839	0.00019	56	1e-06	7	0.000498	190	0.000252	131
R153-0_cleaned	R153-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	20160380	18291394	90.73	['fastq_index_4/R153-0_cleaned/R153-0_cleaned.1.fq', 'fastq_index_4/R153-0_cleaned/R153-0_cleaned.2.fq']	R153-0_cleaned_raw.cram	9732718	0.95	R153-0_cleaned.tsv.xz	48.28	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	326886	113	0.65	0.314232	117056	0.2723	89759	0.001355	494	0.001075	400	0.049575	13646	0.04088	10180	0.000209	53	3e-06	7	0.000566	109	0.000401	68
G425_cleaned	G425_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-30	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	39058212	34624333	88.65	['fastq_index/G425_cleaned/G425_cleaned.1.fq', 'fastq_index/G425_cleaned/G425_cleaned.2.fq']	G425_cleaned_raw.cram	18515334	0.95	G425_cleaned.tsv.xz	47.4	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	528652	192	0.6	0.266961	184584	0.22827	135820	0.001317	787	0.001168	629	0.031494	19706	0.024167	14142	0.000184	42	3.1e-05	3	0.000297	128	0.000193	97
DSMC-KB-0197_cleaned	DSMC-KB-0197_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-04	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	66970206	61082350	91.21	['fastq_index_2/DSMC-KB-0197_cleaned/DSMC-KB-0197_cleaned.1.fq', 'fastq_index_2/DSMC-KB-0197_cleaned/DSMC-KB-0197_cleaned.2.fq']	DSMC-KB-0197_cleaned_raw.cram	32325278	0.95	DSMC-KB-0197_cleaned.tsv.xz	48.27	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	305311	139	0.73	0.354927	123134	0.311565	95824	0.001484	553	0.00138	462	0.057816	12396	0.046344	9003	0.000107	54	4.8e-05	13	0.000494	101	0.000457	70
SNUH-KB-0079_cleaned	SNUH-KB-0079_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	34054994	30384656	89.22	['fastq_index_3/SNUH-KB-0079_cleaned/SNUH-KB-0079_cleaned.2.fq', 'fastq_index_3/SNUH-KB-0079_cleaned/SNUH-KB-0079_cleaned.1.fq']	SNUH-KB-0079_cleaned_raw.cram	16341501	0.95	SNUH-KB-0079_cleaned.tsv.xz	47.99	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	631536	218	0.62	0.286948	224949	0.24826	168876	0.001535	1031	0.001091	831	0.03813	22927	0.031044	16548	0.000569	45	3e-06	6	0.000594	148	0.000292	111
R44-0_cleaned	R44-0_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	41878030	37484897	89.51	['fastq_index_4/R44-0_cleaned/R44-0_cleaned.1.fq', 'fastq_index_4/R44-0_cleaned/R44-0_cleaned.2.fq']	R44-0_cleaned_raw.cram	20271019	0.95	R44-0_cleaned.tsv.xz	48.4	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	813999	313	0.59	0.295692	295981	0.24543	213926	0.001437	1288	0.001078	995	0.034807	28108	0.026208	19372	0.000245	76	5e-06	14	0.000706	216	0.000356	146
D110_cleaned	D110_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-18	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	27859766	24778642	88.94	['output/fastq_index/D110_cleaned/D110_cleaned.2.fq', 'output/fastq_index/D110_cleaned/D110_cleaned.1.fq']	D110_cleaned_raw.cram	13324130	0.95	D110_cleaned.tsv.xz	47.83	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	625954	251	0.62	0.310252	220925	0.260794	156519	0.00181	917	0.001448	724	0.034174	21504	0.028292	15004	0.000439	42	3.5e-05	5	0.000465	127	0.000186	97
DMN_BRMKID702_cleaned	DMN_BRMKID702_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-14	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	18134544	15652213	86.31	['fastq_index_1/DMN_BRMKID702_cleaned/DMN_BRMKID702_cleaned.1.fq', 'fastq_index_1/DMN_BRMKID702_cleaned/DMN_BRMKID702_cleaned.2.fq']	DMN_BRMKID702_cleaned_raw.cram	8554031	0.95	DMN_BRMKID702_cleaned.tsv.xz	47.17	2.0.22	2026-04-16	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	299650	102	0.65	0.323971	124092	0.275648	86982	0.001499	614	0.001284	430	0.032742	9984	0.023521	6459	0.000321	66	3.8e-05	16	0.000533	104	0.000287	68
SSV-KB-0111_cleaned	SSV-KB-0111_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	42146260	35483609	84.19	['fastq_index_3/SSV-KB-0111_cleaned/SSV-KB-0111_cleaned.2.fq', 'fastq_index_3/SSV-KB-0111_cleaned/SSV-KB-0111_cleaned.1.fq']	SSV-KB-0111_cleaned_raw.cram	19216966	0.95	SSV-KB-0111_cleaned.tsv.xz	45.6	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	972784	389	0.6	0.292382	353804	0.242845	258693	0.001657	1697	0.001314	1354	0.027692	34662	0.02181	24598	0.000351	71	2.9e-05	9	0.000358	218	0.000187	157
DSM00270_cleaned	DSM00270_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-21	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	36574238	32283250	88.27	['output/fastq_index/DSM00270_cleaned/DSM00270_cleaned.2.fq', 'output/fastq_index/DSM00270_cleaned/DSM00270_cleaned.1.fq']	DSM00270_cleaned_raw.cram	17268283	0.95	DSM00270_cleaned.tsv.xz	47.21	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	718073	189	0.56	0.259295	244606	0.210922	169941	0.001249	995	0.000948	741	0.028388	22744	0.022665	15101	0.000261	55	2.4e-05	7	0.000451	208	0.000277	146
SSV-KB-0115_cleaned	SSV-KB-0115_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-03	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	40241940	35661732	88.62	['fastq_index_3/SSV-KB-0115_cleaned/SSV-KB-0115_cleaned.1.fq', 'fastq_index_3/SSV-KB-0115_cleaned/SSV-KB-0115_cleaned.2.fq']	SSV-KB-0115_cleaned_raw.cram	19105751	0.95	SSV-KB-0115_cleaned.tsv.xz	47.48	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	652291	237	0.6	0.27869	239357	0.23923	173671	0.001038	1033	0.000813	789	0.028271	22869	0.022893	15525	0.000249	74	2.8e-05	11	0.000481	170	0.000295	131
igAN_171_cleaned	igAN_171_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-31	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	15041534	13482332	89.63	['fastq_index/igAN_171_cleaned/igAN_171_cleaned.2.fq', 'fastq_index/igAN_171_cleaned/igAN_171_cleaned.1.fq']	igAN_171_cleaned_raw.cram	7279937	0.95	igAN_171_cleaned.tsv.xz	48.4	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	494986	157	0.62	0.297363	170603	0.251878	119428	0.001723	741	0.001205	545	0.034738	17021	0.027436	11761	0.000287	27	5e-05	1	0.000728	125	0.000323	88
igAN_BRMKID781_cleaned	igAN_BRMKID781_cleaned	2	2.0.22	bowtie2	2.5.5	2026-04-01	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	16617478	14799153	89.06	['fastq_index/igAN_BRMKID781_cleaned/igAN_BRMKID781_cleaned.1.fq', 'fastq_index/igAN_BRMKID781_cleaned/igAN_BRMKID781_cleaned.2.fq']	igAN_BRMKID781_cleaned_raw.cram	8021594	0.95	igAN_BRMKID781_cleaned.tsv.xz	48.27	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	383445	136	0.67	0.30436	139623	0.266406	101888	0.001626	624	0.001182	471	0.038957	12117	0.032888	8438	0.00044	38	8e-06	2	0.00059	120	0.000359	83
D89_cleaned	D89_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-21	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	33120344	29553200	89.23	['output/fastq_index/D89_cleaned/D89_cleaned.1.fq', 'output/fastq_index/D89_cleaned/D89_cleaned.2.fq']	D89_cleaned_raw.cram	15894170	0.95	D89_cleaned.tsv.xz	47.99	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	707299	210	0.61	0.314292	252276	0.25841	181723	0.001694	1071	0.001185	835	0.032593	22549	0.025562	15700	0.000475	54	4e-06	9	0.000662	159	0.00029	112
DSMC-KB-0181_cleaned	DSMC-KB-0181_cleaned	1	2.0.22	bowtie2	2.5.5	2026-04-04	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	17157030	14753838	85.99	['fastq_index_2/DSMC-KB-0181_cleaned/DSMC-KB-0181_cleaned.2.fq', 'fastq_index_2/DSMC-KB-0181_cleaned/DSMC-KB-0181_cleaned.1.fq']	DSMC-KB-0181_cleaned_raw.cram	7919045	0.95	DSMC-KB-0181_cleaned.tsv.xz	46.16	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	692011	238	0.6	0.294589	243434	0.249319	175541	0.00151	1072	0.001172	837	0.027572	25296	0.022067	17334	0.000271	52	1.7e-05	5	0.000317	164	0.000141	113
D50_cleaned	D50_cleaned	1	2.0.22	bowtie2	2.5.5	2026-03-18	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	22008038	19217648	87.32	['output/fastq_index/D50_cleaned/D50_cleaned.2.fq', 'output/fastq_index/D50_cleaned/D50_cleaned.1.fq']	D50_cleaned_raw.cram	10415775	0.95	D50_cleaned.tsv.xz	47.33	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	677597	225	0.61	0.320972	242653	0.26402	172864	0.001757	1067	0.001382	820	0.027885	22806	0.021583	15399	0.000382	43	2.3e-05	2	0.000473	169	0.000194	118
DSMC-KB-0018_cleaned	DSMC-KB-0018_cleaned	2	2.0.22	bowtie2	2.5.5	2026-03-22	hs_10_4_gut	2025-12-03	complete	80	100	end-to-end	34068946	30793287	90.39	['output/fastq_index/DSMC-KB-0018_cleaned/DSMC-KB-0018_cleaned.1.fq', 'output/fastq_index/DSMC-KB-0018_cleaned/DSMC-KB-0018_cleaned.2.fq']	DSMC-KB-0018_cleaned_raw.cram	16527079	0.95	DSMC-KB-0018_cleaned.tsv.xz	48.51	2.0.22	2026-04-09	hs_10_4_gut	2025-12-03	complete	coverage	0	1234	100	0.1	kegg,eggnog,tigrfam	0.9	318978	125	0.61	0.283102	114886	0.251951	93662	0.001169	485	0.000958	395	0.040641	12609	0.03496	9950	0.000381	49	9e-06	5	0.000542	107	0.000357	79